RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 MGAQ8IWI9 3026 aa-0.22□□□□□ -2.44
SMC4-227ENST00000497984 LOC107984156A0A0G2JMH3 177 aa-0.22□□□□□ -2.44
SMC4-227ENST00000497984 A0A1W2PPB8 328 aa-0.22□□□□□ -2.44
SMC4-227ENST00000497984 KIR3DP1A8MWS1 328 aa-0.22□□□□□ -2.44
SMC4-227ENST00000497984 GABARAPH6UMI1 98 aa-0.22□□□□□ -2.44
SMC4-227ENST00000497984 TMED4Q7Z7H5 227 aa-0.22□□□□□ -2.44
SMC4-227ENST00000497984 CROCCP2Q86T23 111 aa-0.22□□□□□ -2.44
SMC4-227ENST00000497984 ARL17AQ8IVW1 177 aa-0.22□□□□□ -2.44
SMC4-227ENST00000497984 TMEM229BQ8NBD8 167 aa-0.22□□□□□ -2.44
SMC4-227ENST00000497984 OR5H6Q8NGV6 325 aa-0.22□□□□□ -2.44
SMC4-227ENST00000497984 AP3S1Q92572 193 aa-0.22□□□□□ -2.44
SMC4-227ENST00000497984 PRELID3AQ96N28 172 aa-0.22□□□□□ -2.44
SMC4-227ENST00000497984 HOPXQ9BPY8 73 aaPredicted RBP-0.22□□□□□ -2.44
SMC4-227ENST00000497984 MRPL36Q9P0J6 103 aaKnown RBP-0.22□□□□□ -2.44
SMC4-227ENST00000497984 COMMD3Q9UBI1 195 aa-0.22□□□□□ -2.44
SMC4-227ENST00000497984 STOML2Q9UJZ1 356 aa-0.22□□□□□ -2.44
SMC4-227ENST00000497984 NUBP2Q9Y5Y2 271 aa-0.22□□□□□ -2.44
SMC4-227ENST00000497984 LRBAP50851 2863 aa-0.22□□□□□ -2.44
SMC4-227ENST00000497984 CHD7Q9P2D1 2997 aa-0.22□□□□□ -2.45
SMC4-227ENST00000497984 ALMS1Q8TCU4 4167 aa-0.22□□□□□ -2.45
SMC4-227ENST00000497984 PCNX1Q96RV3 2341 aa-0.22□□□□□ -2.45
SMC4-227ENST00000497984 UNC80Q8N2C7 3258 aa-0.23□□□□□ -2.45
SMC4-227ENST00000497984 KDM6BO15054 1643 aa-0.23□□□□□ -2.45
SMC4-227ENST00000497984 MYO7AQ13402 2215 aa-0.23□□□□□ -2.45
SMC4-227ENST00000497984 BBIP1A8MTZ0 92 aa-0.23□□□□□ -2.45
SMC4-227ENST00000497984 FXYD1O00168 92 aa-0.23□□□□□ -2.45
SMC4-227ENST00000497984 IGF2P01344 180 aa-0.23□□□□□ -2.45
SMC4-227ENST00000497984 TPT1P13693 172 aaKnown RBP-0.23□□□□□ -2.45
SMC4-227ENST00000497984 MAXP61244 160 aa-0.23□□□□□ -2.45
SMC4-227ENST00000497984 MRPS15P82914 257 aaKnown RBP-0.23□□□□□ -2.45
SMC4-227ENST00000497984 KRTAP19-7Q3SYF9 63 aa-0.23□□□□□ -2.45
SMC4-227ENST00000497984 C3orf62Q6ZUJ4 267 aa-0.23□□□□□ -2.45
SMC4-227ENST00000497984 FAM24BQ8N5W8 94 aa-0.23□□□□□ -2.45
SMC4-227ENST00000497984 DYDC1Q8WWB3 177 aa-0.23□□□□□ -2.45
SMC4-227ENST00000497984 LAMTOR3Q9UHA4 124 aa-0.23□□□□□ -2.45
SMC4-227ENST00000497984 ANK2Q01484 3957 aa-0.23□□□□□ -2.45
SMC4-227ENST00000497984 SACSQ9NZJ4 4579 aa-0.23□□□□□ -2.45
SMC4-227ENST00000497984 PTPRFP10586 1907 aa-0.23□□□□□ -2.45
SMC4-227ENST00000497984 MTORP42345 2549 aa-0.23□□□□□ -2.45
SMC4-227ENST00000497984 DYNC1H1Q14204 4646 aaKnown RBP-0.23□□□□□ -2.45
SMC4-227ENST00000497984 MYLKQ15746 1914 aa-0.24□□□□□ -2.45
SMC4-227ENST00000497984 CUBNO60494 3623 aa-0.24□□□□□ -2.45
SMC4-227ENST00000497984 FANCMQ8IYD8 2048 aa-0.24□□□□□ -2.45
SMC4-227ENST00000497984 ARL5CA6NH57 179 aa-0.24□□□□□ -2.45
SMC4-227ENST00000497984 SPINK1P00995 79 aa-0.24□□□□□ -2.45
SMC4-227ENST00000497984 IGKCP01834 107 aa-0.24□□□□□ -2.45
SMC4-227ENST00000497984 SAA1P0DJI8 122 aaPredicted RBP-0.24□□□□□ -2.45
SMC4-227ENST00000497984 SDC2P34741 201 aa-0.24□□□□□ -2.45
SMC4-227ENST00000497984 TCTAP57738 103 aa-0.24□□□□□ -2.45
SMC4-227ENST00000497984 STX19Q8N4C7 294 aa-0.24□□□□□ -2.45
SMC4-227ENST00000497984 ISOC1Q96CN7 298 aa-0.24□□□□□ -2.45
SMC4-227ENST00000497984 MPC1Q9Y5U8 109 aa-0.24□□□□□ -2.45
SMC4-227ENST00000497984 CSMD3Q7Z407 3707 aa-0.24□□□□□ -2.45
SMC4-227ENST00000497984 PIK3C2AO00443 1686 aa-0.24□□□□□ -2.45
SMC4-227ENST00000497984 BOD1L1Q8NFC6 3051 aa-0.24□□□□□ -2.45
SMC4-227ENST00000497984 DOCK4Q8N1I0 1966 aa-0.25□□□□□ -2.45
SMC4-227ENST00000497984 DNAH3Q8TD57 4116 aa-0.25□□□□□ -2.45
SMC4-227ENST00000497984 CENPEQ02224 2701 aa-0.25□□□□□ -2.45
SMC4-227ENST00000497984 PLECQ15149 4684 aaKnown RBP-0.25□□□□□ -2.45
SMC4-227ENST00000497984 SRCAPQ6ZRS2 3230 aa-0.25□□□□□ -2.45
SMC4-227ENST00000497984 A0A096LNT2 108 aa-0.25□□□□□ -2.45
SMC4-227ENST00000497984 TRBV27A0A0K0K1C4 114 aa-0.25□□□□□ -2.45
SMC4-227ENST00000497984 HIGD1CA8MV81 97 aa-0.25□□□□□ -2.45
SMC4-227ENST00000497984 CDC42EP2O14613 210 aa-0.25□□□□□ -2.45
SMC4-227ENST00000497984 S100A11P31949 105 aa-0.25□□□□□ -2.45
SMC4-227ENST00000497984 CRYBA4P53673 196 aa-0.25□□□□□ -2.45
SMC4-227ENST00000497984 DNAJB13P59910 316 aa-0.25□□□□□ -2.45
SMC4-227ENST00000497984 Q5BKY6 102 aa-0.25□□□□□ -2.45
SMC4-227ENST00000497984 VMO1Q7Z5L0 202 aa-0.25□□□□□ -2.45
SMC4-227ENST00000497984 TEX29Q8N6K0 151 aa-0.25□□□□□ -2.45
SMC4-227ENST00000497984 PKHD1P08F94 4074 aa-0.25□□□□□ -2.45
SMC4-227ENST00000497984 N4BP2Q86UW6 1770 aaPredicted RBP-0.25□□□□□ -2.45
SMC4-227ENST00000497984 SPTBN2O15020 2390 aa-0.25□□□□□ -2.45
SMC4-227ENST00000497984 GVINP1Q7Z2Y8 2422 aa-0.25□□□□□ -2.45
SMC4-227ENST00000497984 ZFHX3Q15911 3703 aa-0.25□□□□□ -2.45
SMC4-227ENST00000497984 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.25□□□□□ -2.45
SMC4-227ENST00000497984 MUC17Q685J3 4493 aa-0.26□□□□□ -2.45
SMC4-227ENST00000497984 CSMD1Q96PZ7 3565 aa-0.26□□□□□ -2.45
SMC4-227ENST00000497984 EP400Q96L91 3159 aa-0.26□□□□□ -2.45
SMC4-227ENST00000497984 CFAP54Q96N23 3096 aa-0.26□□□□□ -2.45
SMC4-227ENST00000497984 FAM186AA6NE01 2351 aa-0.26□□□□□ -2.45
SMC4-227ENST00000497984 DLC1Q96QB1 1528 aa-0.26□□□□□ -2.45
SMC4-227ENST00000497984 TCOF1Q13428 1488 aaKnown RBP-0.26□□□□□ -2.45
SMC4-227ENST00000497984 TMEM30CPA0ZSE6 113 aa-0.26□□□□□ -2.45
SMC4-227ENST00000497984 TMEM238C9JI98 176 aa-0.26□□□□□ -2.45
SMC4-227ENST00000497984 BCL2P10415 239 aa-0.26□□□□□ -2.45
SMC4-227ENST00000497984 SPRR2DP22532 72 aa-0.26□□□□□ -2.45
SMC4-227ENST00000497984 SERPINB1P30740 379 aa-0.26□□□□□ -2.45
SMC4-227ENST00000497984 BASP1P80723 227 aaKnown RBP-0.26□□□□□ -2.45
SMC4-227ENST00000497984 KRTAP19-8Q3LI54 63 aa-0.26□□□□□ -2.45
SMC4-227ENST00000497984 CCSMST1Q4G0I0 132 aa-0.26□□□□□ -2.45
SMC4-227ENST00000497984 DCUN1D2Q6PH85 259 aa-0.26□□□□□ -2.45
SMC4-227ENST00000497984 LYPD5Q6UWN5 251 aa-0.26□□□□□ -2.45
SMC4-227ENST00000497984 HRCT1Q6UXD1 115 aa-0.26□□□□□ -2.45
SMC4-227ENST00000497984 LINC00305Q7Z4B0 112 aa-0.26□□□□□ -2.45
SMC4-227ENST00000497984 MORN4Q8NDC4 146 aa-0.26□□□□□ -2.45
SMC4-227ENST00000497984 BIN3Q9NQY0 253 aa-0.26□□□□□ -2.45
SMC4-227ENST00000497984 ZFHX4Q86UP3 3567 aa-0.26□□□□□ -2.45
SMC4-227ENST00000497984 CSMD2Q7Z408 3487 aa-0.26□□□□□ -2.45
SMC4-227ENST00000497984 LOC400499M0QZD8 3231 aa-0.26□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms