RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 OR5AL1P0C617 328 aa8.95□□□□□ -0.98
SNRNP200-208ENST00000497539 PDE6HQ13956 83 aa8.95□□□□□ -0.98
SNRNP200-208ENST00000497539 SH2D6Q7Z4S9 175 aa8.95□□□□□ -0.98
SNRNP200-208ENST00000497539 C17orf77Q96MU5 243 aa8.95□□□□□ -0.98
SNRNP200-208ENST00000497539 CFAP46Q8IYW2 2715 aa8.94□□□□□ -0.98
SNRNP200-208ENST00000497539 TRBV19A0A075B6N1 114 aa8.94□□□□□ -0.98
SNRNP200-208ENST00000497539 PRSS29PA6NIE9 313 aa8.94□□□□□ -0.98
SNRNP200-208ENST00000497539 LOXL1Q08397 574 aaPredicted RBP8.94□□□□□ -0.98
SNRNP200-208ENST00000497539 OR9G4Q8NGQ1 327 aa8.94□□□□□ -0.98
SNRNP200-208ENST00000497539 LRBAP50851 2863 aa8.94□□□□□ -0.98
SNRNP200-208ENST00000497539 TRAV40A0A0B4J280 105 aa8.94□□□□□ -0.98
SNRNP200-208ENST00000497539 A6NDX4 124 aa8.94□□□□□ -0.98
SNRNP200-208ENST00000497539 SMAD7O15105 426 aaKnown RBP8.94□□□□□ -0.98
SNRNP200-208ENST00000497539 CTSGP08311 255 aa8.94□□□□□ -0.98
SNRNP200-208ENST00000497539 PPIFP30405 207 aaKnown RBP8.94□□□□□ -0.98
SNRNP200-208ENST00000497539 INSL3P51460 131 aa8.94□□□□□ -0.98
SNRNP200-208ENST00000497539 FOXI1Q12951 378 aa8.94□□□□□ -0.98
SNRNP200-208ENST00000497539 FAM19A5Q7Z5A7 132 aaPredicted RBP8.94□□□□□ -0.98
SNRNP200-208ENST00000497539 OR13C6PQ8NH95 151 aa8.94□□□□□ -0.98
SNRNP200-208ENST00000497539 BEX4Q9NWD9 120 aaPredicted RBP8.94□□□□□ -0.98
SNRNP200-208ENST00000497539 ZNF492Q9P255 531 aa8.94□□□□□ -0.98
SNRNP200-208ENST00000497539 ZFYVE26Q68DK2 2539 aa8.94□□□□□ -0.98
SNRNP200-208ENST00000497539 SPTBN1Q01082 2364 aaKnown RBP8.94□□□□□ -0.98
SNRNP200-208ENST00000497539 KMT2BQ9UMN6 2715 aaPredicted RBP8.93□□□□□ -0.98
SNRNP200-208ENST00000497539 ZNF785A8K8V0 405 aa8.93□□□□□ -0.98
SNRNP200-208ENST00000497539 H3BUA1 57 aa8.93□□□□□ -0.98
SNRNP200-208ENST00000497539 IGF1P05019 195 aa8.93□□□□□ -0.98
SNRNP200-208ENST00000497539 IL4P05112 153 aa8.93□□□□□ -0.98
SNRNP200-208ENST00000497539 OR8A1Q8NGG7 326 aa8.93□□□□□ -0.98
SNRNP200-208ENST00000497539 RPL7P18124 248 aaKnown RBP8.93□□□□□ -0.98
SNRNP200-208ENST00000497539 Q86TA4 180 aa8.93□□□□□ -0.98
SNRNP200-208ENST00000497539 PRSS3P2Q8NHM4 247 aa8.93□□□□□ -0.98
SNRNP200-208ENST00000497539 TMSB15BA0A087X1C1 80 aa8.92□□□□□ -0.98
SNRNP200-208ENST00000497539 FAM223BA6NKX1 122 aa8.92□□□□□ -0.98
SNRNP200-208ENST00000497539 MEIG1Q5JSS6 88 aa8.92□□□□□ -0.98
SNRNP200-208ENST00000497539 Q6Q795 121 aa8.92□□□□□ -0.98
SNRNP200-208ENST00000497539 FAM223AQ8IWN6 122 aa8.92□□□□□ -0.98
SNRNP200-208ENST00000497539 LINC01356Q8N9X3 169 aa8.92□□□□□ -0.98
SNRNP200-208ENST00000497539 AP5S1Q9NUS5 200 aa8.92□□□□□ -0.98
SNRNP200-208ENST00000497539 PRO0461Q9UI25 63 aa8.92□□□□□ -0.98
SNRNP200-208ENST00000497539 TRBV7-1A0A0A6YYK4 115 aa8.92□□□□□ -0.98
SNRNP200-208ENST00000497539 A0A1B0GX51 115 aa8.92□□□□□ -0.98
SNRNP200-208ENST00000497539 IGLV2-11P01706 119 aa8.92□□□□□ -0.98
SNRNP200-208ENST00000497539 IGHV4-38-2P0DP08 117 aa8.92□□□□□ -0.98
SNRNP200-208ENST00000497539 IFI27P40305 119 aaPredicted RBP8.92□□□□□ -0.98
SNRNP200-208ENST00000497539 RPS28P62857 69 aaKnown RBP8.92□□□□□ -0.98
SNRNP200-208ENST00000497539 ANXA2RQ3ZCQ2 193 aa8.92□□□□□ -0.98
SNRNP200-208ENST00000497539 SIGLEC15Q6ZMC9 328 aa8.92□□□□□ -0.98
SNRNP200-208ENST00000497539 ZNF747Q9BV97 191 aa8.92□□□□□ -0.98
SNRNP200-208ENST00000497539 SVEP1Q4LDE5 3571 aa8.92□□□□□ -0.98
SNRNP200-208ENST00000497539 ORM1P02763 201 aa8.91□□□□□ -0.98
SNRNP200-208ENST00000497539 CT83Q5H943 113 aa8.91□□□□□ -0.98
SNRNP200-208ENST00000497539 LINC01545Q5VT33 79 aa8.91□□□□□ -0.98
SNRNP200-208ENST00000497539 TMEM75Q8N9X5 138 aa8.91□□□□□ -0.98
SNRNP200-208ENST00000497539 SOX21Q9Y651 276 aaPredicted RBP8.91□□□□□ -0.98
SNRNP200-208ENST00000497539 A0A1B0GUT8 65 aa8.91□□□□□ -0.98
SNRNP200-208ENST00000497539 HAX1O00165 279 aa8.91□□□□□ -0.98
SNRNP200-208ENST00000497539 FHL3Q13643 280 aa8.91□□□□□ -0.98
SNRNP200-208ENST00000497539 WFDC3Q8IUB2 231 aa8.91□□□□□ -0.98
SNRNP200-208ENST00000497539 RAB37Q96AX2 223 aa8.91□□□□□ -0.98
SNRNP200-208ENST00000497539 EEF1AKMT3Q96AZ1 226 aa8.91□□□□□ -0.98
SNRNP200-208ENST00000497539 ZFAND3Q9H8U3 227 aa8.91□□□□□ -0.98
SNRNP200-208ENST00000497539 IFITM1P13164 125 aa8.9□□□□□ -0.98
SNRNP200-208ENST00000497539 MRPL23Q16540 153 aaKnown RBP8.9□□□□□ -0.98
SNRNP200-208ENST00000497539 C15orf32Q32M92 178 aa8.9□□□□□ -0.98
SNRNP200-208ENST00000497539 MDFICQ9P1T7 246 aa8.9□□□□□ -0.98
SNRNP200-208ENST00000497539 S4R3C0 116 aa8.9□□□□□ -0.98
SNRNP200-208ENST00000497539 TRAV41A0A0B4J266 112 aa8.9□□□□□ -0.98
SNRNP200-208ENST00000497539 FSHBP01225 129 aa8.9□□□□□ -0.98
SNRNP200-208ENST00000497539 IGHG2P01859 326 aa8.9□□□□□ -0.98
SNRNP200-208ENST00000497539 ECSCRQ19T08 205 aa8.9□□□□□ -0.98
SNRNP200-208ENST00000497539 TMEM101Q96IK0 257 aa8.9□□□□□ -0.98
SNRNP200-208ENST00000497539 CCDC140Q96MF4 163 aa8.9□□□□□ -0.98
SNRNP200-208ENST00000497539 GFRA4Q9GZZ7 299 aa8.9□□□□□ -0.98
SNRNP200-208ENST00000497539 NPIPB6E9PJ23 425 aa8.89□□□□□ -0.99
SNRNP200-208ENST00000497539 J3KT08 172 aa8.89□□□□□ -0.99
SNRNP200-208ENST00000497539 M0R3E3 92 aa8.89□□□□□ -0.99
SNRNP200-208ENST00000497539 CRIP1P50238 77 aa8.89□□□□□ -0.99
SNRNP200-208ENST00000497539 FAM159AQ6UWV7 190 aa8.89□□□□□ -0.99
SNRNP200-208ENST00000497539 RABAC1Q9UI14 185 aa8.89□□□□□ -0.99
SNRNP200-208ENST00000497539 SMIM13P0DJ93 91 aa8.89□□□□□ -0.99
SNRNP200-208ENST00000497539 LINC00694P0DN24 101 aa8.89□□□□□ -0.99
SNRNP200-208ENST00000497539 BRD3OSQ6XYD6 125 aa8.89□□□□□ -0.99
SNRNP200-208ENST00000497539 C9orf139Q6ZV77 190 aa8.89□□□□□ -0.99
SNRNP200-208ENST00000497539 COX8CQ7Z4L0 72 aa8.89□□□□□ -0.99
SNRNP200-208ENST00000497539 PRELID3AQ96N28 172 aa8.89□□□□□ -0.99
SNRNP200-208ENST00000497539 UBR5O95071 2799 aaPredicted RBP8.88□□□□□ -0.99
SNRNP200-208ENST00000497539 LINC01548A6NM66 108 aa8.88□□□□□ -0.99
SNRNP200-208ENST00000497539 ZNRF2Q8NHG8 242 aa8.88□□□□□ -0.99
SNRNP200-208ENST00000497539 RASL10AQ92737 203 aa8.88□□□□□ -0.99
SNRNP200-208ENST00000497539 C8orf49Q96NF6 230 aa8.88□□□□□ -0.99
SNRNP200-208ENST00000497539 LINC01587Q99440 93 aa8.88□□□□□ -0.99
SNRNP200-208ENST00000497539 A0A096LNJ9 63 aa8.88□□□□□ -0.99
SNRNP200-208ENST00000497539 D6R8Y8 96 aa8.88□□□□□ -0.99
SNRNP200-208ENST00000497539 RS1O15537 224 aa8.88□□□□□ -0.99
SNRNP200-208ENST00000497539 FGF6P10767 208 aa8.88□□□□□ -0.99
SNRNP200-208ENST00000497539 GAGE13Q4V321 117 aa8.88□□□□□ -0.99
SNRNP200-208ENST00000497539 BCL6BQ8N143 479 aaPredicted RBP8.88□□□□□ -0.99
SNRNP200-208ENST00000497539 U3KQE9 123 aa8.88□□□□□ -0.99
SNRNP200-208ENST00000497539 IGHV3OR16-10A0A075B7F0 116 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms