RNA–Protein interactions for RNA: ENST00000497506.5

FAM3A-220, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-220ENST00000497506 MDFICQ9P1T7 246 aa11.5□□□□□ -0.57
FAM3A-220ENST00000497506 TRGV11A0A075B6L2 103 aa11.49□□□□□ -0.57
FAM3A-220ENST00000497506 DEFB131BA0A096LNP1 70 aa11.49□□□□□ -0.57
FAM3A-220ENST00000497506 GNRH2O43555 120 aa11.49□□□□□ -0.57
FAM3A-220ENST00000497506 RPL35P42766 123 aaKnown RBP11.49□□□□□ -0.57
FAM3A-220ENST00000497506 KCNS1Q96KK3 526 aa11.49□□□□□ -0.57
FAM3A-220ENST00000497506 MLST8Q9BVC4 326 aa11.49□□□□□ -0.57
FAM3A-220ENST00000497506 KLK5Q9Y337 293 aaPredicted RBP11.49□□□□□ -0.57
FAM3A-220ENST00000497506 RBFOX3A6NFN3 312 aa11.48□□□□□ -0.57
FAM3A-220ENST00000497506 FABP5P3A8MUU1 101 aa11.48□□□□□ -0.57
FAM3A-220ENST00000497506 TYMSP04818 313 aa11.48□□□□□ -0.57
FAM3A-220ENST00000497506 ZNF415Q09FC8 603 aa11.48□□□□□ -0.57
FAM3A-220ENST00000497506 Q6ZTI0 123 aa11.48□□□□□ -0.57
FAM3A-220ENST00000497506 BAGE2Q86Y30 109 aa11.48□□□□□ -0.57
FAM3A-220ENST00000497506 NHLRC2Q8NBF2 726 aa11.48□□□□□ -0.57
FAM3A-220ENST00000497506 PCNPQ8WW12 178 aaKnown RBP11.48□□□□□ -0.57
FAM3A-220ENST00000497506 SDF2L1Q9HCN8 221 aa11.48□□□□□ -0.57
FAM3A-220ENST00000497506 IGHV3-16A0A0C4DH30 117 aa11.47□□□□□ -0.57
FAM3A-220ENST00000497506 GAGE12BA1L429 117 aa11.47□□□□□ -0.57
FAM3A-220ENST00000497506 SPINK4O60575 86 aa11.47□□□□□ -0.57
FAM3A-220ENST00000497506 GAGE7O76087 117 aa11.47□□□□□ -0.57
FAM3A-220ENST00000497506 GAGE12FP0CL80 117 aa11.47□□□□□ -0.57
FAM3A-220ENST00000497506 GAGE12GP0CL81 117 aa11.47□□□□□ -0.57
FAM3A-220ENST00000497506 GAGE12IP0CL82 117 aa11.47□□□□□ -0.57
FAM3A-220ENST00000497506 ZNF674Q2M3X9 581 aa11.47□□□□□ -0.57
FAM3A-220ENST00000497506 ZNF506Q5JVG8 444 aa11.47□□□□□ -0.57
FAM3A-220ENST00000497506 MED9Q9NWA0 146 aa11.47□□□□□ -0.57
FAM3A-220ENST00000497506 IGKV3D-20A0A0C4DH25 116 aa11.46□□□□□ -0.57
FAM3A-220ENST00000497506 SH2D1AO60880 128 aa11.46□□□□□ -0.57
FAM3A-220ENST00000497506 FAM162BQ5T6X4 162 aa11.46□□□□□ -0.57
FAM3A-220ENST00000497506 RAB19A4D1S5 217 aa11.45□□□□□ -0.58
FAM3A-220ENST00000497506 HTN3P15516 51 aa11.45□□□□□ -0.58
FAM3A-220ENST00000497506 FAM210AQ96ND0 272 aa11.45□□□□□ -0.58
FAM3A-220ENST00000497506 SPXQ9BT56 116 aa11.45□□□□□ -0.58
FAM3A-220ENST00000497506 PLECQ15149 4684 aaKnown RBP11.45□□□□□ -0.58
FAM3A-220ENST00000497506 TRGV1A0A0A0MS02 117 aa11.44□□□□□ -0.58
FAM3A-220ENST00000497506 IGLL5B9A064 214 aa11.44□□□□□ -0.58
FAM3A-220ENST00000497506 IGLV2-8P01709 118 aa11.44□□□□□ -0.58
FAM3A-220ENST00000497506 ATP5G1P05496 136 aa11.44□□□□□ -0.58
FAM3A-220ENST00000497506 LGALS9BQ3B8N2 356 aa11.44□□□□□ -0.58
FAM3A-220ENST00000497506 CENPWQ5EE01 88 aa11.44□□□□□ -0.58
FAM3A-220ENST00000497506 TOR2AQ5JU69 321 aa11.44□□□□□ -0.58
FAM3A-220ENST00000497506 ZNF575Q86XF7 245 aa11.44□□□□□ -0.58
FAM3A-220ENST00000497506 MRPL16Q9NX20 251 aaKnown RBP11.44□□□□□ -0.58
FAM3A-220ENST00000497506 TRBV20OR9-2A0A075B6H5 130 aa11.43□□□□□ -0.58
FAM3A-220ENST00000497506 KRBOX1C9JBD0 128 aa11.43□□□□□ -0.58
FAM3A-220ENST00000497506 ORM1P02763 201 aa11.43□□□□□ -0.58
FAM3A-220ENST00000497506 C18orf15Q96N68 181 aa11.43□□□□□ -0.58
FAM3A-220ENST00000497506 APLNQ9ULZ1 77 aa11.43□□□□□ -0.58
FAM3A-220ENST00000497506 IGHV4-4A0A075B6R2 117 aa11.42□□□□□ -0.58
FAM3A-220ENST00000497506 B4DEV8 164 aa11.42□□□□□ -0.58
FAM3A-220ENST00000497506 TMEM250H0YL14 139 aa11.42□□□□□ -0.58
FAM3A-220ENST00000497506 M0R036 132 aa11.42□□□□□ -0.58
FAM3A-220ENST00000497506 RNASE3P12724 160 aaKnown RBP11.42□□□□□ -0.58
FAM3A-220ENST00000497506 GNG4P50150 75 aa11.42□□□□□ -0.58
FAM3A-220ENST00000497506 LINC01559Q495D7 138 aa11.42□□□□□ -0.58
FAM3A-220ENST00000497506 C9orf85Q96MD7 179 aa11.42□□□□□ -0.58
FAM3A-220ENST00000497506 EIF5A2Q9GZV4 153 aaKnown RBP11.42□□□□□ -0.58
FAM3A-220ENST00000497506 MUC4Q99102 2169 aa11.42□□□□□ -0.58
FAM3A-220ENST00000497506 TRGV2A0A075B6R0 118 aa11.41□□□□□ -0.58
FAM3A-220ENST00000497506 NDUFS6O75380 124 aaKnown RBP11.41□□□□□ -0.58
FAM3A-220ENST00000497506 TCTAP57738 103 aa11.41□□□□□ -0.58
FAM3A-220ENST00000497506 RASL10AQ92737 203 aa11.41□□□□□ -0.58
FAM3A-220ENST00000497506 SMIM12Q96EX1 92 aa11.41□□□□□ -0.58
FAM3A-220ENST00000497506 FAM210BQ96KR6 192 aa11.41□□□□□ -0.58
FAM3A-220ENST00000497506 KMT2CQ8NEZ4 4911 aaKnown RBP11.4□□□□□ -0.58
FAM3A-220ENST00000497506 PGPEP1LA6NFU8 196 aa11.4□□□□□ -0.58
FAM3A-220ENST00000497506 F5H768 121 aa11.4□□□□□ -0.58
FAM3A-220ENST00000497506 M0R2P5 195 aa11.4□□□□□ -0.58
FAM3A-220ENST00000497506 HOXA5P20719 270 aa11.4□□□□□ -0.58
FAM3A-220ENST00000497506 DNLZQ5SXM8 178 aa11.4□□□□□ -0.58
FAM3A-220ENST00000497506 PRR27Q6MZM9 219 aa11.4□□□□□ -0.58
FAM3A-220ENST00000497506 PARLQ9H300 379 aa11.4□□□□□ -0.58
FAM3A-220ENST00000497506 GRIFINA4D1Z8 144 aa11.39□□□□□ -0.59
FAM3A-220ENST00000497506 SRP19P09132 144 aaKnown RBP11.39□□□□□ -0.59
FAM3A-220ENST00000497506 ASIPP42127 132 aa11.39□□□□□ -0.59
FAM3A-220ENST00000497506 IFITM2Q01629 132 aa11.39□□□□□ -0.59
FAM3A-220ENST00000497506 TMEM88Q6PEY1 159 aa11.39□□□□□ -0.59
FAM3A-220ENST00000497506 TMSB15BA0A087X1C1 80 aa11.38□□□□□ -0.59
FAM3A-220ENST00000497506 LCE6AA0A183 80 aa11.38□□□□□ -0.59
FAM3A-220ENST00000497506 C9JCJ5 164 aa11.38□□□□□ -0.59
FAM3A-220ENST00000497506 MGST1P10620 155 aaKnown RBP11.38□□□□□ -0.59
FAM3A-220ENST00000497506 PTH2Q96A98 100 aa11.38□□□□□ -0.59
FAM3A-220ENST00000497506 NDUFAF3Q9BU61 184 aa11.38□□□□□ -0.59
FAM3A-220ENST00000497506 IL36BQ9NZH7 164 aa11.38□□□□□ -0.59
FAM3A-220ENST00000497506 C19orf71A6NCJ1 209 aa11.37□□□□□ -0.59
FAM3A-220ENST00000497506 S100A4P26447 101 aaKnown RBP11.37□□□□□ -0.59
FAM3A-220ENST00000497506 RPL19P84098 196 aaKnown RBP11.37□□□□□ -0.59
FAM3A-220ENST00000497506 ZNF876PQ49A33 203 aa11.37□□□□□ -0.59
FAM3A-220ENST00000497506 POM121L12Q8N7R1 296 aa11.37□□□□□ -0.59
FAM3A-220ENST00000497506 OCC1Q8TAD7 63 aa11.37□□□□□ -0.59
FAM3A-220ENST00000497506 LYSTQ99698 3801 aa11.37□□□□□ -0.59
FAM3A-220ENST00000497506 NACAE9PAV3 2078 aa11.36□□□□□ -0.59
FAM3A-220ENST00000497506 C9JQL5 133 aa11.36□□□□□ -0.59
FAM3A-220ENST00000497506 H3BVH4 76 aa11.36□□□□□ -0.59
FAM3A-220ENST00000497506 IGHV3-53P01767 116 aa11.36□□□□□ -0.59
FAM3A-220ENST00000497506 ARMS2P0C7Q2 107 aa11.36□□□□□ -0.59
FAM3A-220ENST00000497506 CEBPGP53567 150 aa11.36□□□□□ -0.59
FAM3A-220ENST00000497506 SRSF3P84103 164 aaKnown RBP11.36□□□□□ -0.59
FAM3A-220ENST00000497506 OR5I1Q13606 314 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms