RNA–Protein interactions for RNA: ENST00000496633.1

CDHR3-214, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 949 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-214ENST00000496633 TXNDC17Q9BRA2 123 aa5.39□□□□□ -1.55
CDHR3-214ENST00000496633 MAP1LC3BQ9GZQ8 125 aa5.39□□□□□ -1.55
CDHR3-214ENST00000496633 SDF2L1Q9HCN8 221 aa5.39□□□□□ -1.55
CDHR3-214ENST00000496633 ZFP30Q9Y2G7 519 aa5.39□□□□□ -1.55
CDHR3-214ENST00000496633 PLAC8L1A1L4L8 177 aa5.38□□□□□ -1.55
CDHR3-214ENST00000496633 HMGB3O15347 200 aaKnown RBP5.38□□□□□ -1.55
CDHR3-214ENST00000496633 TAGLN2P37802 199 aaKnown RBP5.38□□□□□ -1.55
CDHR3-214ENST00000496633 UBE2G1P62253 170 aa5.38□□□□□ -1.55
CDHR3-214ENST00000496633 FLI1Q01543 452 aaPredicted RBP5.38□□□□□ -1.55
CDHR3-214ENST00000496633 SOHLH1Q5JUK2 328 aa5.38□□□□□ -1.55
CDHR3-214ENST00000496633 CDPF1Q6NVV7 123 aa5.38□□□□□ -1.55
CDHR3-214ENST00000496633 TMUB2Q71RG4 321 aa5.38□□□□□ -1.55
CDHR3-214ENST00000496633 CYTL1Q9NRR1 136 aa5.38□□□□□ -1.55
CDHR3-214ENST00000496633 RPH3ALQ9UNE2 315 aa5.38□□□□□ -1.55
CDHR3-214ENST00000496633 KLF12Q9Y4X4 402 aa5.38□□□□□ -1.55
CDHR3-214ENST00000496633 RYR3Q15413 4870 aa5.38□□□□□ -1.55
CDHR3-214ENST00000496633 PLECQ15149 4684 aaKnown RBP5.38□□□□□ -1.55
CDHR3-214ENST00000496633 TRGV1A0A0A0MS02 117 aa5.37□□□□□ -1.55
CDHR3-214ENST00000496633 GAGE12BA1L429 117 aa5.37□□□□□ -1.55
CDHR3-214ENST00000496633 SPINK4O60575 86 aa5.37□□□□□ -1.55
CDHR3-214ENST00000496633 GAGE7O76087 117 aa5.37□□□□□ -1.55
CDHR3-214ENST00000496633 PFN1P07737 140 aaKnown RBP5.37□□□□□ -1.55
CDHR3-214ENST00000496633 GAGE12FP0CL80 117 aa5.37□□□□□ -1.55
CDHR3-214ENST00000496633 GAGE12GP0CL81 117 aa5.37□□□□□ -1.55
CDHR3-214ENST00000496633 GAGE12IP0CL82 117 aa5.37□□□□□ -1.55
CDHR3-214ENST00000496633 TMEM88Q6PEY1 159 aa5.37□□□□□ -1.55
CDHR3-214ENST00000496633 C11orf72Q8NBR9 251 aa5.37□□□□□ -1.55
CDHR3-214ENST00000496633 Q8TAT8 98 aa5.37□□□□□ -1.55
CDHR3-214ENST00000496633 SFT2D1Q8WV19 159 aa5.37□□□□□ -1.55
CDHR3-214ENST00000496633 MBD3L1Q8WWY6 194 aa5.37□□□□□ -1.55
CDHR3-214ENST00000496633 FMC1Q96HJ9 113 aa5.37□□□□□ -1.55
CDHR3-214ENST00000496633 MANBALQ9NQG1 85 aa5.37□□□□□ -1.55
CDHR3-214ENST00000496633 GSN-AS1Q9NRJ2 163 aa5.37□□□□□ -1.55
CDHR3-214ENST00000496633 PSG8Q9UQ74 426 aa5.37□□□□□ -1.55
CDHR3-214ENST00000496633 DYNC2H1Q8NCM8 4307 aaKnown RBP5.37□□□□□ -1.55
CDHR3-214ENST00000496633 SACSQ9NZJ4 4579 aa5.36□□□□□ -1.55
CDHR3-214ENST00000496633 TRBV6-1A0A0K0K1D8 114 aa5.36□□□□□ -1.55
CDHR3-214ENST00000496633 FAM74A7A6NL05 159 aa5.36□□□□□ -1.55
CDHR3-214ENST00000496633 FABP5P3A8MUU1 101 aa5.36□□□□□ -1.55
CDHR3-214ENST00000496633 GGTLC3B5MD39 225 aa5.36□□□□□ -1.55
CDHR3-214ENST00000496633 PEX7O00628 323 aa5.36□□□□□ -1.55
CDHR3-214ENST00000496633 IFNA1P01562 189 aa5.36□□□□□ -1.55
CDHR3-214ENST00000496633 H2AFB1P0C5Y9 115 aa5.36□□□□□ -1.55
CDHR3-214ENST00000496633 BTF3P20290 206 aaKnown RBP5.36□□□□□ -1.55
CDHR3-214ENST00000496633 OR5I1Q13606 314 aa5.36□□□□□ -1.55
CDHR3-214ENST00000496633 KIR3DS1Q14943 382 aa5.36□□□□□ -1.55
CDHR3-214ENST00000496633 PIK3CD-AS1Q5SR53 167 aa5.36□□□□□ -1.55
CDHR3-214ENST00000496633 CST9LP1Q5W188 147 aa5.36□□□□□ -1.55
CDHR3-214ENST00000496633 LINC00336Q6ZUF6 198 aa5.36□□□□□ -1.55
CDHR3-214ENST00000496633 SH2D6Q7Z4S9 175 aa5.36□□□□□ -1.55
CDHR3-214ENST00000496633 OR11H4Q8NGC9 324 aa5.36□□□□□ -1.55
CDHR3-214ENST00000496633 FAM213BQ8TBF2 198 aa5.36□□□□□ -1.55
CDHR3-214ENST00000496633 RASL10AQ92737 203 aa5.36□□□□□ -1.55
CDHR3-214ENST00000496633 PRO0255Q9UI72 69 aa5.36□□□□□ -1.55
CDHR3-214ENST00000496633 A0A087WWL8 130 aa5.35□□□□□ -1.55
CDHR3-214ENST00000496633 TRAV1-1A0A0B4J248 108 aa5.35□□□□□ -1.55
CDHR3-214ENST00000496633 M0R2P5 195 aa5.35□□□□□ -1.55
CDHR3-214ENST00000496633 NUDT3O95989 172 aa5.35□□□□□ -1.55
CDHR3-214ENST00000496633 GCGP01275 180 aa5.35□□□□□ -1.55
CDHR3-214ENST00000496633 ORM1P02763 201 aa5.35□□□□□ -1.55
CDHR3-214ENST00000496633 ZNF726P1Q15940 193 aa5.35□□□□□ -1.55
CDHR3-214ENST00000496633 TMEM183BQ1AE95 376 aa5.35□□□□□ -1.55
CDHR3-214ENST00000496633 TTC32Q5I0X7 151 aa5.35□□□□□ -1.55
CDHR3-214ENST00000496633 Q6ZTI0 123 aa5.35□□□□□ -1.55
CDHR3-214ENST00000496633 SSX7Q7RTT5 188 aa5.35□□□□□ -1.55
CDHR3-214ENST00000496633 COX8CQ7Z4L0 72 aa5.35□□□□□ -1.55
CDHR3-214ENST00000496633 PRNTQ86SH4 94 aa5.35□□□□□ -1.55
CDHR3-214ENST00000496633 TMEM183AQ8IXX5 376 aa5.35□□□□□ -1.55
CDHR3-214ENST00000496633 PCNPQ8WW12 178 aaKnown RBP5.35□□□□□ -1.55
CDHR3-214ENST00000496633 PTH2Q96A98 100 aa5.35□□□□□ -1.55
CDHR3-214ENST00000496633 NAGKQ9UJ70 344 aa5.35□□□□□ -1.55
CDHR3-214ENST00000496633 TRAV26-1A0A087WT03 109 aa5.34□□□□□ -1.55
CDHR3-214ENST00000496633 TRAV8-1A0A0A6YYK1 113 aa5.34□□□□□ -1.55
CDHR3-214ENST00000496633 TRGV4A0A0C4DH28 118 aa5.34□□□□□ -1.55
CDHR3-214ENST00000496633 KRBOX1C9JBD0 128 aa5.34□□□□□ -1.55
CDHR3-214ENST00000496633 SMLR1H3BR10 107 aa5.34□□□□□ -1.55
CDHR3-214ENST00000496633 K7EP13 123 aa5.34□□□□□ -1.55
CDHR3-214ENST00000496633 PRM2P04554 102 aa5.34□□□□□ -1.55
CDHR3-214ENST00000496633 S100A4P26447 101 aaKnown RBP5.34□□□□□ -1.55
CDHR3-214ENST00000496633 AKR1C3P42330 323 aa5.34□□□□□ -1.55
CDHR3-214ENST00000496633 FGF8P55075 233 aaPredicted RBP5.34□□□□□ -1.55
CDHR3-214ENST00000496633 UBE2G2P60604 165 aa5.34□□□□□ -1.55
CDHR3-214ENST00000496633 GNG5P63218 68 aa5.34□□□□□ -1.55
CDHR3-214ENST00000496633 MRPL23Q16540 153 aaKnown RBP5.34□□□□□ -1.55
CDHR3-214ENST00000496633 MUC21Q5SSG8 566 aa5.34□□□□□ -1.55
CDHR3-214ENST00000496633 PRR9Q5T870 116 aa5.34□□□□□ -1.55
CDHR3-214ENST00000496633 SMIM12Q96EX1 92 aa5.34□□□□□ -1.55
CDHR3-214ENST00000496633 BIN3Q9NQY0 253 aa5.34□□□□□ -1.55
CDHR3-214ENST00000496633 PLA2G2EQ9NZK7 142 aa5.34□□□□□ -1.55
CDHR3-214ENST00000496633 ICOSQ9Y6W8 199 aa5.34□□□□□ -1.55
CDHR3-214ENST00000496633 DNAH1Q9P2D7 4330 aa5.33□□□□□ -1.56
CDHR3-214ENST00000496633 RYR2Q92736 4967 aa5.33□□□□□ -1.56
CDHR3-214ENST00000496633 TRAV4A0A0B4J268 109 aa5.33□□□□□ -1.56
CDHR3-214ENST00000496633 IGHV3-16A0A0C4DH30 117 aa5.33□□□□□ -1.56
CDHR3-214ENST00000496633 C9JCJ5 164 aa5.33□□□□□ -1.56
CDHR3-214ENST00000496633 PAX4O43316 350 aa5.33□□□□□ -1.56
CDHR3-214ENST00000496633 PDE6DO43924 150 aa5.33□□□□□ -1.56
CDHR3-214ENST00000496633 EIF3GO75821 320 aaKnown RBP eCLIP5.33□□□□□ -1.56
CDHR3-214ENST00000496633 IGLV2-11P01706 119 aa5.33□□□□□ -1.56
CDHR3-214ENST00000496633 PRB4P10163 310 aaPredicted RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms