RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 APCDD1LQ8NCL9 501 aa2.89□□□□□ -1.95
SF3B1-212ENST00000496458 OR4K13Q8NH42 304 aa2.89□□□□□ -1.95
SF3B1-212ENST00000496458 OR4A5Q8NH83 315 aa2.89□□□□□ -1.95
SF3B1-212ENST00000496458 ATP6V0E2Q8NHE4 81 aa2.89□□□□□ -1.95
SF3B1-212ENST00000496458 STAG3L4Q8TBR4 150 aa2.89□□□□□ -1.95
SF3B1-212ENST00000496458 KLK6Q92876 244 aa2.89□□□□□ -1.95
SF3B1-212ENST00000496458 ABHD14BQ96IU4 210 aa2.89□□□□□ -1.95
SF3B1-212ENST00000496458 C2orf50Q96LR7 162 aa2.89□□□□□ -1.95
SF3B1-212ENST00000496458 OR2A5Q96R48 311 aa2.89□□□□□ -1.95
SF3B1-212ENST00000496458 SDF2Q99470 211 aa2.89□□□□□ -1.95
SF3B1-212ENST00000496458 SMIM3Q9BZL3 60 aa2.89□□□□□ -1.95
SF3B1-212ENST00000496458 TMEM222Q9H0R3 208 aa2.89□□□□□ -1.95
SF3B1-212ENST00000496458 CMC2Q9NRP2 79 aa2.89□□□□□ -1.95
SF3B1-212ENST00000496458 RPRMQ9NS64 109 aa2.89□□□□□ -1.95
SF3B1-212ENST00000496458 ZNF443Q9Y2A4 671 aaPredicted RBP2.89□□□□□ -1.95
SF3B1-212ENST00000496458 MED31Q9Y3C7 131 aa2.89□□□□□ -1.95
SF3B1-212ENST00000496458 DMXL2Q8TDJ6 3036 aa2.89□□□□□ -1.95
SF3B1-212ENST00000496458 SPEGQ15772 3267 aa2.88□□□□□ -1.95
SF3B1-212ENST00000496458 ZZEF1O43149 2961 aa2.88□□□□□ -1.95
SF3B1-212ENST00000496458 DUXBA0A1W2PPF3 345 aa2.88□□□□□ -1.95
SF3B1-212ENST00000496458 C7orf71A4D174 169 aa2.88□□□□□ -1.95
SF3B1-212ENST00000496458 DPRXA6NFQ7 191 aa2.88□□□□□ -1.95
SF3B1-212ENST00000496458 ZNF736B4DX44 427 aaPredicted RBP2.88□□□□□ -1.95
SF3B1-212ENST00000496458 J3KT08 172 aa2.88□□□□□ -1.95
SF3B1-212ENST00000496458 J3QRE1 110 aa2.88□□□□□ -1.95
SF3B1-212ENST00000496458 KRASP01116 189 aa2.88□□□□□ -1.95
SF3B1-212ENST00000496458 GPX1P07203 203 aa2.88□□□□□ -1.95
SF3B1-212ENST00000496458 KRTAP13-2Q52LG2 175 aa2.88□□□□□ -1.95
SF3B1-212ENST00000496458 ZNF880Q6PDB4 577 aa2.88□□□□□ -1.95
SF3B1-212ENST00000496458 CYP2G1PQ6ZSU1 146 aa2.88□□□□□ -1.95
SF3B1-212ENST00000496458 TMEM256Q8N2U0 113 aa2.88□□□□□ -1.95
SF3B1-212ENST00000496458 DEFB119Q8N690 84 aa2.88□□□□□ -1.95
SF3B1-212ENST00000496458 C18orf32Q8TCD1 76 aa2.88□□□□□ -1.95
SF3B1-212ENST00000496458 RTN4IP1Q8WWV3 396 aaPredicted RBP2.88□□□□□ -1.95
SF3B1-212ENST00000496458 RMI2Q96E14 147 aa2.88□□□□□ -1.95
SF3B1-212ENST00000496458 CCL13Q99616 98 aa2.88□□□□□ -1.95
SF3B1-212ENST00000496458 MRPL32Q9BYC8 188 aaKnown RBP2.88□□□□□ -1.95
SF3B1-212ENST00000496458 CHST6Q9GZX3 395 aa2.88□□□□□ -1.95
SF3B1-212ENST00000496458 MANBALQ9NQG1 85 aa2.88□□□□□ -1.95
SF3B1-212ENST00000496458 TVP23BQ9NYZ1 205 aa2.88□□□□□ -1.95
SF3B1-212ENST00000496458 TAAR3PQ9P1P4 343 aa2.88□□□□□ -1.95
SF3B1-212ENST00000496458 RABAC1Q9UI14 185 aa2.88□□□□□ -1.95
SF3B1-212ENST00000496458 PCTPQ9UKL6 214 aa2.88□□□□□ -1.95
SF3B1-212ENST00000496458 TRAPPC1Q9Y5R8 145 aa2.88□□□□□ -1.95
SF3B1-212ENST00000496458 LINC00312Q9Y6C7 94 aa2.88□□□□□ -1.95
SF3B1-212ENST00000496458 PKD1L2Q7Z442 2459 aa2.88□□□□□ -1.95
SF3B1-212ENST00000496458 NBASA2RRP1 2371 aa2.88□□□□□ -1.95
SF3B1-212ENST00000496458 NYNRINQ9P2P1 1898 aaKnown RBP2.88□□□□□ -1.95
SF3B1-212ENST00000496458 SPTBP11277 2137 aa2.87□□□□□ -1.95
SF3B1-212ENST00000496458 USP24Q9UPU5 2620 aa2.87□□□□□ -1.95
SF3B1-212ENST00000496458 A8MWL6 223 aa2.87□□□□□ -1.95
SF3B1-212ENST00000496458 TMEM262E9PQX1 116 aa2.87□□□□□ -1.95
SF3B1-212ENST00000496458 TNFP01375 233 aa2.87□□□□□ -1.95
SF3B1-212ENST00000496458 APCSP02743 223 aa2.87□□□□□ -1.95
SF3B1-212ENST00000496458 PRH1P02810 166 aa2.87□□□□□ -1.95
SF3B1-212ENST00000496458 FABP2P12104 132 aa2.87□□□□□ -1.95
SF3B1-212ENST00000496458 CPMP14384 443 aa2.87□□□□□ -1.95
SF3B1-212ENST00000496458 CRYBB3P26998 211 aa2.87□□□□□ -1.95
SF3B1-212ENST00000496458 CST6Q15828 149 aa2.87□□□□□ -1.95
SF3B1-212ENST00000496458 GLYATL3Q5SZD4 288 aa2.87□□□□□ -1.95
SF3B1-212ENST00000496458 LCN15Q6UWW0 184 aa2.87□□□□□ -1.95
SF3B1-212ENST00000496458 UNQ9165/PRO28630Q6UXU0 137 aa2.87□□□□□ -1.95
SF3B1-212ENST00000496458 TEX29Q8N6K0 151 aa2.87□□□□□ -1.95
SF3B1-212ENST00000496458 OR10AG1Q8NH19 301 aa2.87□□□□□ -1.95
SF3B1-212ENST00000496458 CLDND2Q8NHS1 167 aa2.87□□□□□ -1.95
SF3B1-212ENST00000496458 MBD3L1Q8WWY6 194 aa2.87□□□□□ -1.95
SF3B1-212ENST00000496458 MAL2Q969L2 176 aa2.87□□□□□ -1.95
SF3B1-212ENST00000496458 PLEKHB2Q96CS7 222 aa2.87□□□□□ -1.95
SF3B1-212ENST00000496458 GNPNAT1Q96EK6 184 aaPredicted RBP2.87□□□□□ -1.95
SF3B1-212ENST00000496458 OR4C12Q96R67 309 aa2.87□□□□□ -1.95
SF3B1-212ENST00000496458 TMEM70Q9BUB7 260 aa2.87□□□□□ -1.95
SF3B1-212ENST00000496458 CHCHD7Q9BUK0 85 aa2.87□□□□□ -1.95
SF3B1-212ENST00000496458 COMMD5Q9GZQ3 224 aa2.87□□□□□ -1.95
SF3B1-212ENST00000496458 OR2D2Q9H210 308 aa2.87□□□□□ -1.95
SF3B1-212ENST00000496458 KCNIP2Q9NS61 270 aa2.87□□□□□ -1.95
SF3B1-212ENST00000496458 TLN1Q9Y490 2541 aaKnown RBP2.87□□□□□ -1.95
SF3B1-212ENST00000496458 BPTFQ12830 3046 aa2.87□□□□□ -1.95
SF3B1-212ENST00000496458 DSCAMO60469 2012 aa2.86□□□□□ -1.95
SF3B1-212ENST00000496458 NBEAQ8NFP9 2946 aa2.86□□□□□ -1.95
SF3B1-212ENST00000496458 FAM208BQ5VWN6 2430 aa2.86□□□□□ -1.95
SF3B1-212ENST00000496458 TRAV40A0A0B4J280 105 aa2.86□□□□□ -1.95
SF3B1-212ENST00000496458 MUC21A0A0G2JKD1 596 aa2.86□□□□□ -1.95
SF3B1-212ENST00000496458 MUC21A0A140T8X8 626 aa2.86□□□□□ -1.95
SF3B1-212ENST00000496458 A0A1W2PPM0 123 aa2.86□□□□□ -1.95
SF3B1-212ENST00000496458 NUPR1O60356 82 aa2.86□□□□□ -1.95
SF3B1-212ENST00000496458 NDUFC2O95298 119 aa2.86□□□□□ -1.95
SF3B1-212ENST00000496458 CD3DP04234 171 aa2.86□□□□□ -1.95
SF3B1-212ENST00000496458 SLC25A6P12236 298 aa2.86□□□□□ -1.95
SF3B1-212ENST00000496458 G6PCP35575 357 aa2.86□□□□□ -1.95
SF3B1-212ENST00000496458 PPP1CCP36873 323 aaKnown RBP2.86□□□□□ -1.95
SF3B1-212ENST00000496458 KRTDAPP60985 99 aa2.86□□□□□ -1.95
SF3B1-212ENST00000496458 LOXL1Q08397 574 aaPredicted RBP2.86□□□□□ -1.95
SF3B1-212ENST00000496458 FUT5Q11128 374 aa2.86□□□□□ -1.95
SF3B1-212ENST00000496458 INSL4Q14641 139 aa2.86□□□□□ -1.95
SF3B1-212ENST00000496458 IGFBP7Q16270 282 aa2.86□□□□□ -1.95
SF3B1-212ENST00000496458 NCBP2-AS2Q69YL0 99 aa2.86□□□□□ -1.95
SF3B1-212ENST00000496458 C22orf39Q6P5X5 142 aa2.86□□□□□ -1.95
SF3B1-212ENST00000496458 Q6ZS49 121 aa2.86□□□□□ -1.95
SF3B1-212ENST00000496458 Q6ZUT4 128 aa2.86□□□□□ -1.95
SF3B1-212ENST00000496458 RPS27LQ71UM5 84 aaKnown RBP2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms