RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 TMEM75Q8N9X5 138 aa10.85□□□□□ -0.67
HDAC4-213ENST00000496347 KCNS1Q96KK3 526 aa10.85□□□□□ -0.67
HDAC4-213ENST00000496347 IGHV3-16A0A0C4DH30 117 aa10.84□□□□□ -0.67
HDAC4-213ENST00000496347 CTXND1A0A1B0GTU2 59 aa10.84□□□□□ -0.67
HDAC4-213ENST00000496347 A0A1W2PRE2 83 aa10.84□□□□□ -0.67
HDAC4-213ENST00000496347 M0R2P5 195 aa10.84□□□□□ -0.67
HDAC4-213ENST00000496347 TAAR5O14804 337 aa10.84□□□□□ -0.67
HDAC4-213ENST00000496347 FHL2Q14192 279 aa10.84□□□□□ -0.67
HDAC4-213ENST00000496347 ZFP69Q49AA0 526 aa10.84□□□□□ -0.67
HDAC4-213ENST00000496347 KRTAP1-5Q9BYS1 174 aa10.84□□□□□ -0.67
HDAC4-213ENST00000496347 HHLA3Q9XRX5 114 aa10.84□□□□□ -0.67
HDAC4-213ENST00000496347 TRAV4A0A0B4J268 109 aa10.83□□□□□ -0.68
HDAC4-213ENST00000496347 TRGV4A0A0C4DH28 118 aa10.83□□□□□ -0.68
HDAC4-213ENST00000496347 ARPC5O15511 151 aa10.83□□□□□ -0.68
HDAC4-213ENST00000496347 TYMSP04818 313 aa10.83□□□□□ -0.68
HDAC4-213ENST00000496347 MRPL23Q16540 153 aaKnown RBP10.83□□□□□ -0.68
HDAC4-213ENST00000496347 AKR1C8PQ5T2L2 129 aa10.83□□□□□ -0.68
HDAC4-213ENST00000496347 PCNPQ8WW12 178 aaKnown RBP10.83□□□□□ -0.68
HDAC4-213ENST00000496347 C8orf49Q96NF6 230 aa10.83□□□□□ -0.68
HDAC4-213ENST00000496347 IGLV2-11P01706 119 aa10.82□□□□□ -0.68
HDAC4-213ENST00000496347 PFN1P07737 140 aaKnown RBP10.82□□□□□ -0.68
HDAC4-213ENST00000496347 FLI1Q01543 452 aaPredicted RBP10.82□□□□□ -0.68
HDAC4-213ENST00000496347 TNP2Q05952 138 aa10.82□□□□□ -0.68
HDAC4-213ENST00000496347 ZNF726P1Q15940 193 aa10.82□□□□□ -0.68
HDAC4-213ENST00000496347 EPDR1Q9UM22 224 aa10.82□□□□□ -0.68
HDAC4-213ENST00000496347 PSG8Q9UQ74 426 aa10.82□□□□□ -0.68
HDAC4-213ENST00000496347 C9JCJ5 164 aa10.81□□□□□ -0.68
HDAC4-213ENST00000496347 ORM1P02763 201 aa10.81□□□□□ -0.68
HDAC4-213ENST00000496347 SFTA3P0C7M3 94 aa10.81□□□□□ -0.68
HDAC4-213ENST00000496347 SRIP30626 198 aa10.81□□□□□ -0.68
HDAC4-213ENST00000496347 SUMO1P63165 101 aaKnown RBP10.81□□□□□ -0.68
HDAC4-213ENST00000496347 ZNF345Q14585 488 aa10.81□□□□□ -0.68
HDAC4-213ENST00000496347 SMUG1Q53HV7 270 aa10.81□□□□□ -0.68
HDAC4-213ENST00000496347 ZNF479Q96JC4 524 aa10.81□□□□□ -0.68
HDAC4-213ENST00000496347 SGK494Q96LW2 274 aa10.81□□□□□ -0.68
HDAC4-213ENST00000496347 NKX6-2Q9C056 277 aaPredicted RBP10.81□□□□□ -0.68
HDAC4-213ENST00000496347 SIVA1O15304 175 aa10.8□□□□□ -0.68
HDAC4-213ENST00000496347 NXPH4O95158 308 aa10.8□□□□□ -0.68
HDAC4-213ENST00000496347 GCGP01275 180 aa10.8□□□□□ -0.68
HDAC4-213ENST00000496347 PPT1P50897 306 aa10.8□□□□□ -0.68
HDAC4-213ENST00000496347 SAPCD1Q5SSQ6 148 aa10.8□□□□□ -0.68
HDAC4-213ENST00000496347 NEGR1Q7Z3B1 354 aa10.8□□□□□ -0.68
HDAC4-213ENST00000496347 K7EQD1 137 aa10.79□□□□□ -0.68
HDAC4-213ENST00000496347 GNRH2O43555 120 aa10.79□□□□□ -0.68
HDAC4-213ENST00000496347 PRNTQ86SH4 94 aa10.79□□□□□ -0.68
HDAC4-213ENST00000496347 OR4C5Q8NGB2 326 aa10.79□□□□□ -0.68
HDAC4-213ENST00000496347 TXNDC17Q9BRA2 123 aa10.79□□□□□ -0.68
HDAC4-213ENST00000496347 TCEAL7Q9BRU2 100 aa10.79□□□□□ -0.68
HDAC4-213ENST00000496347 MAP1LC3B2A6NCE7 125 aa10.78□□□□□ -0.68
HDAC4-213ENST00000496347 PEX7O00628 323 aa10.78□□□□□ -0.68
HDAC4-213ENST00000496347 IFNA7P01567 189 aa10.78□□□□□ -0.68
HDAC4-213ENST00000496347 GYPEP15421 78 aa10.78□□□□□ -0.68
HDAC4-213ENST00000496347 ZNF80P51504 273 aaPredicted RBP10.78□□□□□ -0.68
HDAC4-213ENST00000496347 SH2D6Q7Z4S9 175 aa10.78□□□□□ -0.68
HDAC4-213ENST00000496347 Q86TA4 180 aa10.78□□□□□ -0.68
HDAC4-213ENST00000496347 ZNF575Q86XF7 245 aa10.78□□□□□ -0.68
HDAC4-213ENST00000496347 HIST1H2BAQ96A08 127 aa10.78□□□□□ -0.68
HDAC4-213ENST00000496347 MAP1LC3BQ9GZQ8 125 aa10.78□□□□□ -0.68
HDAC4-213ENST00000496347 CYTL1Q9NRR1 136 aa10.78□□□□□ -0.68
HDAC4-213ENST00000496347 PCLOQ9Y6V0 5065 aa10.78□□□□□ -0.68
HDAC4-213ENST00000496347 FAM74A7A6NL05 159 aa10.77□□□□□ -0.69
HDAC4-213ENST00000496347 CIDEAO60543 219 aa10.77□□□□□ -0.69
HDAC4-213ENST00000496347 UBE2G2P60604 165 aa10.77□□□□□ -0.69
HDAC4-213ENST00000496347 LYPD5Q6UWN5 251 aa10.77□□□□□ -0.69
HDAC4-213ENST00000496347 C9orf85Q96MD7 179 aa10.77□□□□□ -0.69
HDAC4-213ENST00000496347 C11orf21Q9P2W6 132 aa10.77□□□□□ -0.69
HDAC4-213ENST00000496347 ARL2-SNX15V9GYD0 113 aa10.77□□□□□ -0.69
HDAC4-213ENST00000496347 C16orf90A8MZG2 172 aa10.76□□□□□ -0.69
HDAC4-213ENST00000496347 K7EP13 123 aa10.76□□□□□ -0.69
HDAC4-213ENST00000496347 FGF8P55075 233 aaPredicted RBP10.76□□□□□ -0.69
HDAC4-213ENST00000496347 LINC00315P59091 139 aa10.76□□□□□ -0.69
HDAC4-213ENST00000496347 ZNF876PQ49A33 203 aa10.76□□□□□ -0.69
HDAC4-213ENST00000496347 KCNRGQ8N5I3 272 aa10.76□□□□□ -0.69
HDAC4-213ENST00000496347 PTH2Q96A98 100 aa10.76□□□□□ -0.69
HDAC4-213ENST00000496347 LRP1BQ9NZR2 4599 aa10.75□□□□□ -0.69
HDAC4-213ENST00000496347 RYR1P21817 5038 aa10.75□□□□□ -0.69
HDAC4-213ENST00000496347 GATA1P15976 413 aaPredicted RBP10.75□□□□□ -0.69
HDAC4-213ENST00000496347 STOML3Q8TAV4 291 aa10.75□□□□□ -0.69
HDAC4-213ENST00000496347 TRAV34A0A0B4J273 112 aa10.74□□□□□ -0.69
HDAC4-213ENST00000496347 HMSDA8MTL9 139 aa10.74□□□□□ -0.69
HDAC4-213ENST00000496347 SMLR1H3BR10 107 aa10.74□□□□□ -0.69
HDAC4-213ENST00000496347 FHITP49789 147 aa10.74□□□□□ -0.69
HDAC4-213ENST00000496347 TIRAPP58753 221 aa10.74□□□□□ -0.69
HDAC4-213ENST00000496347 PIK3CD-AS1Q5SR53 167 aa10.74□□□□□ -0.69
HDAC4-213ENST00000496347 FMC1Q96HJ9 113 aa10.74□□□□□ -0.69
HDAC4-213ENST00000496347 LINC00479Q96M42 142 aa10.74□□□□□ -0.69
HDAC4-213ENST00000496347 LY96Q9Y6Y9 160 aa10.74□□□□□ -0.69
HDAC4-213ENST00000496347 HSPG2P98160 4391 aa10.73□□□□□ -0.69
HDAC4-213ENST00000496347 TRAV9-2A0A087WT02 112 aa10.73□□□□□ -0.69
HDAC4-213ENST00000496347 UMAD1C9J7I0 102 aa10.73□□□□□ -0.69
HDAC4-213ENST00000496347 RNASE3P12724 160 aaKnown RBP10.73□□□□□ -0.69
HDAC4-213ENST00000496347 RHOHQ15669 191 aa10.73□□□□□ -0.69
HDAC4-213ENST00000496347 ZNF506Q5JVG8 444 aa10.73□□□□□ -0.69
HDAC4-213ENST00000496347 CFAP126Q5VTH2 177 aa10.73□□□□□ -0.69
HDAC4-213ENST00000496347 Q6ZRN7 208 aaPredicted RBP10.73□□□□□ -0.69
HDAC4-213ENST00000496347 COX8CQ7Z4L0 72 aa10.73□□□□□ -0.69
HDAC4-213ENST00000496347 A0A0D9SG52 128 aa10.72□□□□□ -0.69
HDAC4-213ENST00000496347 TRBV6-4A0A1B0GX49 114 aa10.72□□□□□ -0.69
HDAC4-213ENST00000496347 KANTRA0A1W2PQU2 76 aa10.72□□□□□ -0.69
HDAC4-213ENST00000496347 RS1O15537 224 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms