RNA–Protein interactions for RNA: ENST00000496104.1

XPA-204, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-204ENST00000496104 KRTAP4-16G5E9R7 235 aaPredicted RBP3.14□□□□□ -1.91
XPA-204ENST00000496104 SLC22A1O15245 554 aa3.14□□□□□ -1.91
XPA-204ENST00000496104 ZNF253O75346 499 aa3.14□□□□□ -1.91
XPA-204ENST00000496104 CPSF4O95639 269 aaKnown RBP3.14□□□□□ -1.91
XPA-204ENST00000496104 BCL2P10415 239 aa3.14□□□□□ -1.91
XPA-204ENST00000496104 DEFA5Q01523 94 aa3.14□□□□□ -1.91
XPA-204ENST00000496104 ZNF497Q6ZNH5 498 aa3.14□□□□□ -1.91
XPA-204ENST00000496104 PRNTQ86SH4 94 aa3.14□□□□□ -1.91
XPA-204ENST00000496104 TCTE3Q8IZS6 198 aa3.14□□□□□ -1.91
XPA-204ENST00000496104 NPBQ8NG41 125 aa3.14□□□□□ -1.91
XPA-204ENST00000496104 MAL2Q969L2 176 aa3.14□□□□□ -1.91
XPA-204ENST00000496104 RMI2Q96E14 147 aa3.14□□□□□ -1.91
XPA-204ENST00000496104 IGLV1-50A0A075B6I6 118 aa3.13□□□□□ -1.91
XPA-204ENST00000496104 TRAV9-1A0A075B6T8 112 aa3.13□□□□□ -1.91
XPA-204ENST00000496104 MEIKINA0A087WXM9 373 aa3.13□□□□□ -1.91
XPA-204ENST00000496104 TRAV41A0A0B4J266 112 aa3.13□□□□□ -1.91
XPA-204ENST00000496104 M0R135 149 aa3.13□□□□□ -1.91
XPA-204ENST00000496104 M0R381 172 aa3.13□□□□□ -1.91
XPA-204ENST00000496104 SOCS3O14543 225 aa3.13□□□□□ -1.91
XPA-204ENST00000496104 SRSF10O75494 262 aaKnown RBP3.13□□□□□ -1.91
XPA-204ENST00000496104 OR2H2O95918 312 aa3.13□□□□□ -1.91
XPA-204ENST00000496104 MAS1P04201 325 aa3.13□□□□□ -1.91
XPA-204ENST00000496104 CRISP2P16562 243 aa3.13□□□□□ -1.91
XPA-204ENST00000496104 SRIP30626 198 aa3.13□□□□□ -1.91
XPA-204ENST00000496104 CDKN2AP42771 156 aaKnown RBP3.13□□□□□ -1.91
XPA-204ENST00000496104 ATP5G3P48201 142 aa3.13□□□□□ -1.91
XPA-204ENST00000496104 CRIP2P52943 208 aaPredicted RBP3.13□□□□□ -1.91
XPA-204ENST00000496104 LINC01547P58512 204 aaPredicted RBP3.13□□□□□ -1.91
XPA-204ENST00000496104 TAS2R30P59541 319 aa3.13□□□□□ -1.91
XPA-204ENST00000496104 C12orf45Q8N5I9 185 aaPredicted RBP3.13□□□□□ -1.91
XPA-204ENST00000496104 SLC25A29Q8N8R3 303 aa3.13□□□□□ -1.91
XPA-204ENST00000496104 ZNF555Q8NEP9 628 aa3.13□□□□□ -1.91
XPA-204ENST00000496104 OR51T1Q8NGJ9 327 aa3.13□□□□□ -1.91
XPA-204ENST00000496104 MRPL30Q8TCC3 161 aaKnown RBP3.13□□□□□ -1.91
XPA-204ENST00000496104 AQP3Q92482 292 aa3.13□□□□□ -1.91
XPA-204ENST00000496104 ZNF799Q96GE5 643 aa3.13□□□□□ -1.91
XPA-204ENST00000496104 C14orf144Q96I85 54 aa3.13□□□□□ -1.91
XPA-204ENST00000496104 SOSTQ9BQB4 213 aa3.13□□□□□ -1.91
XPA-204ENST00000496104 THTPAQ9BU02 230 aa3.13□□□□□ -1.91
XPA-204ENST00000496104 ZNF436Q9C0F3 470 aaPredicted RBP3.13□□□□□ -1.91
XPA-204ENST00000496104 BCL2L10Q9HD36 194 aa3.13□□□□□ -1.91
XPA-204ENST00000496104 MED31Q9Y3C7 131 aa3.13□□□□□ -1.91
XPA-204ENST00000496104 LINC00312Q9Y6C7 94 aa3.13□□□□□ -1.91
XPA-204ENST00000496104 A0A087WUU8 490 aa3.12□□□□□ -1.91
XPA-204ENST00000496104 DEFB131BA0A096LNP1 70 aa3.12□□□□□ -1.91
XPA-204ENST00000496104 C9JAW5 83 aa3.12□□□□□ -1.91
XPA-204ENST00000496104 UCHL1P09936 223 aa3.12□□□□□ -1.91
XPA-204ENST00000496104 RPL7P18124 248 aaKnown RBP3.12□□□□□ -1.91
XPA-204ENST00000496104 OPRK1P41145 380 aa3.12□□□□□ -1.91
XPA-204ENST00000496104 LPAR6P43657 344 aa3.12□□□□□ -1.91
XPA-204ENST00000496104 CRISP3P54108 245 aa3.12□□□□□ -1.91
XPA-204ENST00000496104 EDDM3BP56851 147 aa3.12□□□□□ -1.91
XPA-204ENST00000496104 EBLN2Q6P2I7 272 aa3.12□□□□□ -1.91
XPA-204ENST00000496104 HEPN1Q6WQI6 88 aa3.12□□□□□ -1.91
XPA-204ENST00000496104 UBE2DNLQ8IWF7 75 aa3.12□□□□□ -1.91
XPA-204ENST00000496104 BAP18Q8IXM2 172 aa3.12□□□□□ -1.91
XPA-204ENST00000496104 C4orf33Q8N1A6 199 aa3.12□□□□□ -1.91
XPA-204ENST00000496104 ZNF664Q8N3J9 261 aa3.12□□□□□ -1.91
XPA-204ENST00000496104 LEAP2Q969E1 77 aa3.12□□□□□ -1.91
XPA-204ENST00000496104 SPIN2AQ99865 258 aa3.12□□□□□ -1.91
XPA-204ENST00000496104 SPIN2BQ9BPZ2 258 aa3.12□□□□□ -1.91
XPA-204ENST00000496104 ZNF581Q9P0T4 197 aa3.12□□□□□ -1.91
XPA-204ENST00000496104 NAT8BQ9UHF3 227 aa3.12□□□□□ -1.91
XPA-204ENST00000496104 ERG28Q9UKR5 140 aa3.12□□□□□ -1.91
XPA-204ENST00000496104 HIGD1AQ9Y241 93 aa3.12□□□□□ -1.91
XPA-204ENST00000496104 IGHV1-3A0A0C4DH29 117 aa3.11□□□□□ -1.91
XPA-204ENST00000496104 A0A1B0GUV1 79 aa3.11□□□□□ -1.91
XPA-204ENST00000496104 C20orf202A1L168 122 aa3.11□□□□□ -1.91
XPA-204ENST00000496104 F6UZH7 168 aa3.11□□□□□ -1.91
XPA-204ENST00000496104 INS-IGF2F8WCM5 200 aa3.11□□□□□ -1.91
XPA-204ENST00000496104 UBE2L6O14933 153 aa3.11□□□□□ -1.91
XPA-204ENST00000496104 OR7C2O60412 319 aa3.11□□□□□ -1.91
XPA-204ENST00000496104 DPM2O94777 84 aa3.11□□□□□ -1.91
XPA-204ENST00000496104 LTAP01374 205 aa3.11□□□□□ -1.91
XPA-204ENST00000496104 IGHV3-7P01780 117 aa3.11□□□□□ -1.91
XPA-204ENST00000496104 GIG44P09565 113 aaPredicted RBP3.11□□□□□ -1.91
XPA-204ENST00000496104 DNAH10OSP0CZ25 163 aa3.11□□□□□ -1.91
XPA-204ENST00000496104 SMIM17P0DL12 118 aa3.11□□□□□ -1.91
XPA-204ENST00000496104 T-ENOLP0DO92 83 aa3.11□□□□□ -1.91
XPA-204ENST00000496104 ATP6V0CP27449 155 aa3.11□□□□□ -1.91
XPA-204ENST00000496104 ATP5G2Q06055 141 aa3.11□□□□□ -1.91
XPA-204ENST00000496104 TMEM183BQ1AE95 376 aa3.11□□□□□ -1.91
XPA-204ENST00000496104 MPV17L2Q567V2 206 aa3.11□□□□□ -1.91
XPA-204ENST00000496104 TMEM183AQ8IXX5 376 aa3.11□□□□□ -1.91
XPA-204ENST00000496104 YIPF7Q8N8F6 280 aa3.11□□□□□ -1.91
XPA-204ENST00000496104 TOMM6Q96B49 74 aa3.11□□□□□ -1.91
XPA-204ENST00000496104 IGF2BP2-AS1Q96M15 143 aa3.11□□□□□ -1.91
XPA-204ENST00000496104 TP53RKQ96S44 253 aa3.11□□□□□ -1.91
XPA-204ENST00000496104 WDR61Q9GZS3 305 aaKnown RBP3.11□□□□□ -1.91
XPA-204ENST00000496104 CACYBPQ9HB71 228 aaKnown RBP3.11□□□□□ -1.91
XPA-204ENST00000496104 MRPL16Q9NX20 251 aaKnown RBP3.11□□□□□ -1.91
XPA-204ENST00000496104 CACNG5Q9UF02 275 aa3.11□□□□□ -1.91
XPA-204ENST00000496104 ZNF706Q9Y5V0 76 aaPredicted RBP3.11□□□□□ -1.91
XPA-204ENST00000496104 USH2AO75445 5202 aa3.1□□□□□ -1.91
XPA-204ENST00000496104 TRBV20OR9-2A0A075B6H5 130 aa3.1□□□□□ -1.91
XPA-204ENST00000496104 IGHV3-66A0A0C4DH42 116 aa3.1□□□□□ -1.91
XPA-204ENST00000496104 MEIS3P1A6NDR6 274 aa3.1□□□□□ -1.91
XPA-204ENST00000496104 C2orf70A6NJV1 201 aa3.1□□□□□ -1.91
XPA-204ENST00000496104 CPSF4LA6NMK7 179 aaKnown RBP3.1□□□□□ -1.91
XPA-204ENST00000496104 FABP5P3A8MUU1 101 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms