RNA–Protein interactions for RNA: ENST00000496026.1

HDAC9-226, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 860 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-226ENST00000496026 PRR27Q6MZM9 219 aa10.56□□□□□ -0.72
HDAC9-226ENST00000496026 MUC7Q8TAX7 377 aa10.56□□□□□ -0.72
HDAC9-226ENST00000496026 MLST8Q9BVC4 326 aa10.56□□□□□ -0.72
HDAC9-226ENST00000496026 PARLQ9H300 379 aa10.56□□□□□ -0.72
HDAC9-226ENST00000496026 NOP10Q9NPE3 64 aaKnown RBP10.56□□□□□ -0.72
HDAC9-226ENST00000496026 GSN-AS1Q9NRJ2 163 aa10.56□□□□□ -0.72
HDAC9-226ENST00000496026 DKK2Q9UBU2 259 aa10.56□□□□□ -0.72
HDAC9-226ENST00000496026 LYRM9A8MSI8 78 aa10.55□□□□□ -0.72
HDAC9-226ENST00000496026 GNRH2O43555 120 aa10.55□□□□□ -0.72
HDAC9-226ENST00000496026 ORM1P02763 201 aa10.55□□□□□ -0.72
HDAC9-226ENST00000496026 SRP19P09132 144 aaKnown RBP10.55□□□□□ -0.72
HDAC9-226ENST00000496026 IBA57Q5T440 356 aaKnown RBP10.55□□□□□ -0.72
HDAC9-226ENST00000496026 C11orf72Q8NBR9 251 aa10.55□□□□□ -0.72
HDAC9-226ENST00000496026 SMIM12Q96EX1 92 aa10.55□□□□□ -0.72
HDAC9-226ENST00000496026 C11orf21Q9P2W6 132 aa10.55□□□□□ -0.72
HDAC9-226ENST00000496026 M0R036 132 aa10.54□□□□□ -0.72
HDAC9-226ENST00000496026 TYMSP04818 313 aa10.54□□□□□ -0.72
HDAC9-226ENST00000496026 TCL1AP56279 114 aa10.54□□□□□ -0.72
HDAC9-226ENST00000496026 DAD1P61803 113 aa10.54□□□□□ -0.72
HDAC9-226ENST00000496026 SMDT1Q9H4I9 107 aa10.54□□□□□ -0.72
HDAC9-226ENST00000496026 TRBV20OR9-2A0A075B6H5 130 aa10.53□□□□□ -0.72
HDAC9-226ENST00000496026 PGPEP1LA6NFU8 196 aa10.53□□□□□ -0.72
HDAC9-226ENST00000496026 B4DEV8 164 aa10.53□□□□□ -0.72
HDAC9-226ENST00000496026 IGLV2-8P01709 118 aa10.53□□□□□ -0.72
HDAC9-226ENST00000496026 DEFB130BP0DP73 79 aa10.53□□□□□ -0.72
HDAC9-226ENST00000496026 DEFB130AP0DP74 79 aa10.53□□□□□ -0.72
HDAC9-226ENST00000496026 SRSF3P84103 164 aaKnown RBP10.53□□□□□ -0.72
HDAC9-226ENST00000496026 DAZ2Q13117 558 aaKnown RBP10.53□□□□□ -0.72
HDAC9-226ENST00000496026 C12orf74Q32Q52 190 aa10.53□□□□□ -0.72
HDAC9-226ENST00000496026 BIN3Q9NQY0 253 aa10.53□□□□□ -0.72
HDAC9-226ENST00000496026 MDFICQ9P1T7 246 aa10.53□□□□□ -0.72
HDAC9-226ENST00000496026 IGKV3D-20A0A0C4DH25 116 aa10.52□□□□□ -0.73
HDAC9-226ENST00000496026 IGHV3-16A0A0C4DH30 117 aa10.52□□□□□ -0.73
HDAC9-226ENST00000496026 ZNF727A8MUV8 499 aa10.52□□□□□ -0.73
HDAC9-226ENST00000496026 C9JCJ5 164 aa10.52□□□□□ -0.73
HDAC9-226ENST00000496026 C9JQL5 133 aa10.52□□□□□ -0.73
HDAC9-226ENST00000496026 OR5I1Q13606 314 aa10.52□□□□□ -0.73
HDAC9-226ENST00000496026 ZFAND6Q6FIF0 208 aa10.52□□□□□ -0.73
HDAC9-226ENST00000496026 DAZAP1Q96EP5 407 aaKnown RBP10.52□□□□□ -0.73
HDAC9-226ENST00000496026 SMIM7Q9BQ49 75 aa10.52□□□□□ -0.73
HDAC9-226ENST00000496026 TMSB15BA0A087X1C1 80 aa10.51□□□□□ -0.73
HDAC9-226ENST00000496026 GAGE12BA1L429 117 aa10.51□□□□□ -0.73
HDAC9-226ENST00000496026 KRBOX1C9JBD0 128 aa10.51□□□□□ -0.73
HDAC9-226ENST00000496026 GAGE7O76087 117 aa10.51□□□□□ -0.73
HDAC9-226ENST00000496026 GAGE12FP0CL80 117 aa10.51□□□□□ -0.73
HDAC9-226ENST00000496026 GAGE12GP0CL81 117 aa10.51□□□□□ -0.73
HDAC9-226ENST00000496026 GAGE12IP0CL82 117 aa10.51□□□□□ -0.73
HDAC9-226ENST00000496026 S100A4P26447 101 aaKnown RBP10.51□□□□□ -0.73
HDAC9-226ENST00000496026 ASIPP42127 132 aa10.51□□□□□ -0.73
HDAC9-226ENST00000496026 Q6ZTC4 211 aa10.51□□□□□ -0.73
HDAC9-226ENST00000496026 OCC1Q8TAD7 63 aa10.51□□□□□ -0.73
HDAC9-226ENST00000496026 SPXQ9BT56 116 aa10.51□□□□□ -0.73
HDAC9-226ENST00000496026 TRGV1A0A0A0MS02 117 aa10.5□□□□□ -0.73
HDAC9-226ENST00000496026 LINC01559Q495D7 138 aa10.5□□□□□ -0.73
HDAC9-226ENST00000496026 FAM74A3Q4VXF1 159 aa10.5□□□□□ -0.73
HDAC9-226ENST00000496026 PHLDA1Q8WV24 401 aaPredicted RBP10.5□□□□□ -0.73
HDAC9-226ENST00000496026 GRIFINA4D1Z8 144 aa10.49□□□□□ -0.73
HDAC9-226ENST00000496026 C3orf84H3BNL1 204 aa10.49□□□□□ -0.73
HDAC9-226ENST00000496026 SPINK4O60575 86 aa10.49□□□□□ -0.73
HDAC9-226ENST00000496026 HTN3P15516 51 aa10.49□□□□□ -0.73
HDAC9-226ENST00000496026 Q6ZTI0 123 aa10.49□□□□□ -0.73
HDAC9-226ENST00000496026 MRPL16Q9NX20 251 aaKnown RBP10.49□□□□□ -0.73
HDAC9-226ENST00000496026 STAB2Q8WWQ8 2551 aa10.48□□□□□ -0.73
HDAC9-226ENST00000496026 TRGV2A0A075B6R0 118 aa10.48□□□□□ -0.73
HDAC9-226ENST00000496026 TRAV10A0A0B4J240 114 aa10.48□□□□□ -0.73
HDAC9-226ENST00000496026 NUPR2A6NF83 97 aa10.48□□□□□ -0.73
HDAC9-226ENST00000496026 K7EN84 100 aa10.48□□□□□ -0.73
HDAC9-226ENST00000496026 P01737 135 aa10.48□□□□□ -0.73
HDAC9-226ENST00000496026 LGALS9BQ3B8N2 356 aa10.48□□□□□ -0.73
HDAC9-226ENST00000496026 LY96Q9Y6Y9 160 aa10.48□□□□□ -0.73
HDAC9-226ENST00000496026 DEFB131BA0A096LNP1 70 aa10.47□□□□□ -0.73
HDAC9-226ENST00000496026 C19orf71A6NCJ1 209 aa10.47□□□□□ -0.73
HDAC9-226ENST00000496026 H3BVH4 76 aa10.47□□□□□ -0.73
HDAC9-226ENST00000496026 M0R2P5 195 aa10.47□□□□□ -0.73
HDAC9-226ENST00000496026 RNASE3P12724 160 aaKnown RBP10.47□□□□□ -0.73
HDAC9-226ENST00000496026 RPL19P84098 196 aaKnown RBP10.47□□□□□ -0.73
HDAC9-226ENST00000496026 TMEM241Q24JQ0 296 aa10.47□□□□□ -0.73
HDAC9-226ENST00000496026 SOHLH1Q5JUK2 328 aa10.47□□□□□ -0.73
HDAC9-226ENST00000496026 CEMP1Q6PRD7 247 aaPredicted RBP10.47□□□□□ -0.73
HDAC9-226ENST00000496026 LINC00612Q8N6U2 182 aa10.47□□□□□ -0.73
HDAC9-226ENST00000496026 OR2D3Q8NGH3 330 aa10.47□□□□□ -0.73
HDAC9-226ENST00000496026 C9orf85Q96MD7 179 aa10.47□□□□□ -0.73
HDAC9-226ENST00000496026 ATP5G1P05496 136 aa10.46□□□□□ -0.73
HDAC9-226ENST00000496026 LINC01551Q86U37 167 aa10.46□□□□□ -0.73
HDAC9-226ENST00000496026 KLK5Q9Y337 293 aaPredicted RBP10.46□□□□□ -0.73
HDAC9-226ENST00000496026 XKRY2A2RUG3 117 aa10.45□□□□□ -0.74
HDAC9-226ENST00000496026 CXCL1P09341 107 aa10.45□□□□□ -0.74
HDAC9-226ENST00000496026 SFTA3P0C7M3 94 aa10.45□□□□□ -0.74
HDAC9-226ENST00000496026 ARMS2P0C7Q2 107 aa10.45□□□□□ -0.74
HDAC9-226ENST00000496026 RPS20P60866 119 aaKnown RBP10.45□□□□□ -0.74
HDAC9-226ENST00000496026 DNLZQ5SXM8 178 aa10.45□□□□□ -0.74
HDAC9-226ENST00000496026 CASC10Q5T4H9 136 aa10.45□□□□□ -0.74
HDAC9-226ENST00000496026 COMMD7Q86VX2 200 aa10.45□□□□□ -0.74
HDAC9-226ENST00000496026 NUDT10Q8NFP7 164 aa10.45□□□□□ -0.74
HDAC9-226ENST00000496026 NUDT11Q96G61 164 aa10.45□□□□□ -0.74
HDAC9-226ENST00000496026 RNASE7Q9H1E1 156 aaKnown RBP10.45□□□□□ -0.74
HDAC9-226ENST00000496026 IL36BQ9NZH7 164 aa10.45□□□□□ -0.74
HDAC9-226ENST00000496026 NAT8Q9UHE5 227 aa10.45□□□□□ -0.74
HDAC9-226ENST00000496026 ERVFC1-1P60608 527 aa10.44□□□□□ -0.74
HDAC9-226ENST00000496026 ZNF876PQ49A33 203 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms