RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 DNASE2O00115 360 aaPredicted RBP4.58□□□□□ -1.68
VIM-207ENST00000495528 CXorf1O96002 111 aa4.58□□□□□ -1.68
VIM-207ENST00000495528 NBEAP1P0C6P0 100 aa4.58□□□□□ -1.68
VIM-207ENST00000495528 STAG3L2P0CL84 134 aa4.58□□□□□ -1.68
VIM-207ENST00000495528 STAG3L3P0CL85 134 aa4.58□□□□□ -1.68
VIM-207ENST00000495528 PYYP10082 97 aa4.58□□□□□ -1.68
VIM-207ENST00000495528 GALR1P47211 349 aa4.58□□□□□ -1.68
VIM-207ENST00000495528 TFPI2P48307 235 aa4.58□□□□□ -1.68
VIM-207ENST00000495528 TAS2R45P59539 299 aa4.58□□□□□ -1.68
VIM-207ENST00000495528 RAB14P61106 215 aa4.58□□□□□ -1.68
VIM-207ENST00000495528 C1orf194Q5T5A4 169 aa4.58□□□□□ -1.68
VIM-207ENST00000495528 SIGLEC15Q6ZMC9 328 aa4.58□□□□□ -1.68
VIM-207ENST00000495528 COX8CQ7Z4L0 72 aa4.58□□□□□ -1.68
VIM-207ENST00000495528 BPIFA4PQ86YQ2 179 aa4.58□□□□□ -1.68
VIM-207ENST00000495528 OR11H2Q8NH07 326 aa4.58□□□□□ -1.68
VIM-207ENST00000495528 LRRC20Q8TCA0 184 aa4.58□□□□□ -1.68
VIM-207ENST00000495528 MAP1LC3BQ9GZQ8 125 aa4.58□□□□□ -1.68
VIM-207ENST00000495528 TMEM231Q9H6L2 316 aa4.58□□□□□ -1.68
VIM-207ENST00000495528 RNF24Q9Y225 148 aa4.58□□□□□ -1.68
VIM-207ENST00000495528 ABCA13Q86UQ4 5058 aa4.58□□□□□ -1.68
VIM-207ENST00000495528 DNAH11Q96DT5 4516 aa4.58□□□□□ -1.68
VIM-207ENST00000495528 IGKV3D-20A0A0C4DH25 116 aa4.57□□□□□ -1.68
VIM-207ENST00000495528 A0A1B0GVY2 172 aa4.57□□□□□ -1.68
VIM-207ENST00000495528 IGLL5B9A064 214 aa4.57□□□□□ -1.68
VIM-207ENST00000495528 TEX46H3BTG2 121 aa4.57□□□□□ -1.68
VIM-207ENST00000495528 MRPS12O15235 138 aaKnown RBP4.57□□□□□ -1.68
VIM-207ENST00000495528 ARL14EPLP0DKL9 152 aa4.57□□□□□ -1.68
VIM-207ENST00000495528 HIST1H1EP10412 219 aaKnown RBP4.57□□□□□ -1.68
VIM-207ENST00000495528 RPL7P18124 248 aaKnown RBP4.57□□□□□ -1.68
VIM-207ENST00000495528 GCHFRP30047 84 aa4.57□□□□□ -1.68
VIM-207ENST00000495528 TCTAP57738 103 aa4.57□□□□□ -1.68
VIM-207ENST00000495528 UBE2G2P60604 165 aa4.57□□□□□ -1.68
VIM-207ENST00000495528 RANP62826 216 aaKnown RBP4.57□□□□□ -1.68
VIM-207ENST00000495528 KHDC3LQ587J8 217 aa4.57□□□□□ -1.68
VIM-207ENST00000495528 ZNF767PQ75MW2 155 aa4.57□□□□□ -1.68
VIM-207ENST00000495528 STXBP6Q8NFX7 210 aa4.57□□□□□ -1.68
VIM-207ENST00000495528 FXYD5Q96DB9 178 aa4.57□□□□□ -1.68
VIM-207ENST00000495528 GPR82Q96P67 336 aa4.57□□□□□ -1.68
VIM-207ENST00000495528 C11orf68Q9H3H3 251 aaKnown RBP4.57□□□□□ -1.68
VIM-207ENST00000495528 ZNF586Q9NXT0 402 aa4.57□□□□□ -1.68
VIM-207ENST00000495528 TMEM14CQ9P0S9 112 aa4.57□□□□□ -1.68
VIM-207ENST00000495528 TRAV1-1A0A0B4J248 108 aa4.56□□□□□ -1.68
VIM-207ENST00000495528 PGPA6NDG6 321 aa4.56□□□□□ -1.68
VIM-207ENST00000495528 HELTA6NFD8 242 aa4.56□□□□□ -1.68
VIM-207ENST00000495528 HBE1P02100 147 aa4.56□□□□□ -1.68
VIM-207ENST00000495528 NMBP08949 121 aa4.56□□□□□ -1.68
VIM-207ENST00000495528 PRB4P10163 310 aaPredicted RBP4.56□□□□□ -1.68
VIM-207ENST00000495528 CMC4P56277 68 aaPredicted RBP4.56□□□□□ -1.68
VIM-207ENST00000495528 UBE2L3P68036 154 aaKnown RBP4.56□□□□□ -1.68
VIM-207ENST00000495528 PAFAH1B2P68402 229 aa4.56□□□□□ -1.68
VIM-207ENST00000495528 LINC00336Q6ZUF6 198 aa4.56□□□□□ -1.68
VIM-207ENST00000495528 NHLRC2Q8NBF2 726 aa4.56□□□□□ -1.68
VIM-207ENST00000495528 LINC00052Q96N35 136 aa4.56□□□□□ -1.68
VIM-207ENST00000495528 MS4A6AQ9H2W1 248 aa4.56□□□□□ -1.68
VIM-207ENST00000495528 TMEM167BQ9NRX6 74 aa4.56□□□□□ -1.68
VIM-207ENST00000495528 TRBV19A0A075B6N1 114 aa4.55□□□□□ -1.68
VIM-207ENST00000495528 EPM2AB3EWF7 344 aa4.55□□□□□ -1.68
VIM-207ENST00000495528 C11orf94C9JXX5 98 aa4.55□□□□□ -1.68
VIM-207ENST00000495528 K7EQD1 137 aa4.55□□□□□ -1.68
VIM-207ENST00000495528 CA1P00915 261 aaPredicted RBP4.55□□□□□ -1.68
VIM-207ENST00000495528 CD5P06127 495 aa4.55□□□□□ -1.68
VIM-207ENST00000495528 RBMY1A1P0DJD3 496 aaKnown RBP4.55□□□□□ -1.68
VIM-207ENST00000495528 RBMY1CP0DJD4 496 aa4.55□□□□□ -1.68
VIM-207ENST00000495528 IGLC2P0DOY2 106 aa4.55□□□□□ -1.68
VIM-207ENST00000495528 HLA-DMBP28068 263 aa4.55□□□□□ -1.68
VIM-207ENST00000495528 ID1P41134 155 aa4.55□□□□□ -1.68
VIM-207ENST00000495528 PSMB3P49720 205 aa4.55□□□□□ -1.68
VIM-207ENST00000495528 RBMY1FQ15415 496 aaKnown RBP4.55□□□□□ -1.68
VIM-207ENST00000495528 GUK1Q16774 197 aa4.55□□□□□ -1.68
VIM-207ENST00000495528 CLLU1Q5K131 121 aa4.55□□□□□ -1.68
VIM-207ENST00000495528 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.55□□□□□ -1.68
VIM-207ENST00000495528 EXOC3-AS1Q8N2X6 119 aa4.55□□□□□ -1.68
VIM-207ENST00000495528 RNF182Q8N6D2 247 aa4.55□□□□□ -1.68
VIM-207ENST00000495528 Q8NAQ8 132 aa4.55□□□□□ -1.68
VIM-207ENST00000495528 NRN1Q9NPD7 142 aa4.55□□□□□ -1.68
VIM-207ENST00000495528 GNG13Q9P2W3 67 aa4.55□□□□□ -1.68
VIM-207ENST00000495528 A0A087X0K7 114 aa4.54□□□□□ -1.68
VIM-207ENST00000495528 RBFOX3A6NFN3 312 aa4.54□□□□□ -1.68
VIM-207ENST00000495528 ZNF705FA8MVS1 300 aaPredicted RBP4.54□□□□□ -1.68
VIM-207ENST00000495528 K7EQG2 157 aa4.54□□□□□ -1.68
VIM-207ENST00000495528 SLC17A3O00476 420 aa4.54□□□□□ -1.68
VIM-207ENST00000495528 RTL8CO15255 209 aa4.54□□□□□ -1.68
VIM-207ENST00000495528 SLC25A5P05141 298 aaKnown RBP4.54□□□□□ -1.68
VIM-207ENST00000495528 GIG44P09565 113 aaPredicted RBP4.54□□□□□ -1.68
VIM-207ENST00000495528 PPT1P50897 306 aa4.54□□□□□ -1.68
VIM-207ENST00000495528 DEFB131AP59861 70 aa4.54□□□□□ -1.68
VIM-207ENST00000495528 PSG9Q00887 426 aa4.54□□□□□ -1.68
VIM-207ENST00000495528 FAM24BQ8N5W8 94 aa4.54□□□□□ -1.68
VIM-207ENST00000495528 LYPD6BQ8NI32 183 aa4.54□□□□□ -1.68
VIM-207ENST00000495528 SUN5Q8TC36 379 aa4.54□□□□□ -1.68
VIM-207ENST00000495528 DCANP1Q8TF63 244 aa4.54□□□□□ -1.68
VIM-207ENST00000495528 EIF5A2Q9GZV4 153 aaKnown RBP4.54□□□□□ -1.68
VIM-207ENST00000495528 Q9H3A6 140 aa4.54□□□□□ -1.68
VIM-207ENST00000495528 ZNF331Q9NQX6 463 aaPredicted RBP4.54□□□□□ -1.68
VIM-207ENST00000495528 YTHDF2Q9Y5A9 579 aaKnown RBP4.54□□□□□ -1.68
VIM-207ENST00000495528 PKHD1P08F94 4074 aa4.54□□□□□ -1.68
VIM-207ENST00000495528 TRAV8-2A0A0B4J237 113 aa4.53□□□□□ -1.68
VIM-207ENST00000495528 TRAV10A0A0B4J240 114 aa4.53□□□□□ -1.68
VIM-207ENST00000495528 A0A1W2PRE2 83 aa4.53□□□□□ -1.68
VIM-207ENST00000495528 FAM74A7A6NL05 159 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms