RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 UPK3BQ9BT76 320 aa6.6□□□□□ -1.35
MSH5-218ENST00000494646 MED28Q9H204 178 aa6.6□□□□□ -1.35
MSH5-218ENST00000494646 PRO0255Q9UI72 69 aa6.6□□□□□ -1.35
MSH5-218ENST00000494646 ICOSQ9Y6W8 199 aa6.6□□□□□ -1.35
MSH5-218ENST00000494646 TRGV4A0A0C4DH28 118 aa6.59□□□□□ -1.35
MSH5-218ENST00000494646 F6UZH7 168 aa6.59□□□□□ -1.35
MSH5-218ENST00000494646 MALP21145 153 aa6.59□□□□□ -1.35
MSH5-218ENST00000494646 ATP6V0CP27449 155 aa6.59□□□□□ -1.35
MSH5-218ENST00000494646 Q6AWC8 147 aa6.59□□□□□ -1.35
MSH5-218ENST00000494646 LYPD5Q6UWN5 251 aa6.59□□□□□ -1.35
MSH5-218ENST00000494646 PQLC2Q6ZP29 291 aa6.59□□□□□ -1.35
MSH5-218ENST00000494646 SPATA12Q7Z6I5 190 aa6.59□□□□□ -1.35
MSH5-218ENST00000494646 RAB24Q969Q5 203 aa6.59□□□□□ -1.35
MSH5-218ENST00000494646 TVP23CQ96ET8 276 aa6.59□□□□□ -1.35
MSH5-218ENST00000494646 TREM1Q9NP99 234 aa6.59□□□□□ -1.35
MSH5-218ENST00000494646 LENEPQ9Y5L5 61 aa6.59□□□□□ -1.35
MSH5-218ENST00000494646 TNFRSF18Q9Y5U5 241 aa6.59□□□□□ -1.35
MSH5-218ENST00000494646 SIVA1O15304 175 aa6.58□□□□□ -1.36
MSH5-218ENST00000494646 ARL14EPLP0DKL9 152 aa6.58□□□□□ -1.36
MSH5-218ENST00000494646 CDC34P49427 236 aaPredicted RBP6.58□□□□□ -1.36
MSH5-218ENST00000494646 SLAQ13239 276 aa6.58□□□□□ -1.36
MSH5-218ENST00000494646 TTC32Q5I0X7 151 aa6.58□□□□□ -1.36
MSH5-218ENST00000494646 SPXQ9BT56 116 aa6.58□□□□□ -1.36
MSH5-218ENST00000494646 TRGV11A0A075B6L2 103 aa6.57□□□□□ -1.36
MSH5-218ENST00000494646 TRAV21A0A0B4J279 112 aa6.57□□□□□ -1.36
MSH5-218ENST00000494646 NXPH4O95158 308 aa6.57□□□□□ -1.36
MSH5-218ENST00000494646 TYMSP04818 313 aa6.57□□□□□ -1.36
MSH5-218ENST00000494646 STAG3L2P0CL84 134 aa6.57□□□□□ -1.36
MSH5-218ENST00000494646 STAG3L3P0CL85 134 aa6.57□□□□□ -1.36
MSH5-218ENST00000494646 GYPEP15421 78 aa6.57□□□□□ -1.36
MSH5-218ENST00000494646 LINC00315P59091 139 aa6.57□□□□□ -1.36
MSH5-218ENST00000494646 MRPL23Q16540 153 aaKnown RBP6.57□□□□□ -1.36
MSH5-218ENST00000494646 OR4C5Q8NGB2 326 aa6.57□□□□□ -1.36
MSH5-218ENST00000494646 TMED6Q8WW62 240 aa6.57□□□□□ -1.36
MSH5-218ENST00000494646 RASL10AQ92737 203 aa6.57□□□□□ -1.36
MSH5-218ENST00000494646 KRTAP4-5Q9BYR2 181 aa6.57□□□□□ -1.36
MSH5-218ENST00000494646 SH3BGRL3Q9H299 93 aa6.57□□□□□ -1.36
MSH5-218ENST00000494646 IGHV3-16A0A0C4DH30 117 aa6.56□□□□□ -1.36
MSH5-218ENST00000494646 A0A1W2PPQ1 181 aa6.56□□□□□ -1.36
MSH5-218ENST00000494646 C9JCJ5 164 aa6.56□□□□□ -1.36
MSH5-218ENST00000494646 K7EQD1 137 aa6.56□□□□□ -1.36
MSH5-218ENST00000494646 PTTG1O95997 202 aa6.56□□□□□ -1.36
MSH5-218ENST00000494646 GCHFRP30047 84 aa6.56□□□□□ -1.36
MSH5-218ENST00000494646 FUSP35637 526 aaKnown RBP eCLIP6.56□□□□□ -1.36
MSH5-218ENST00000494646 ZNF80P51504 273 aaPredicted RBP6.56□□□□□ -1.36
MSH5-218ENST00000494646 RPL7L1Q6DKI1 246 aaKnown RBP6.56□□□□□ -1.36
MSH5-218ENST00000494646 NEGR1Q7Z3B1 354 aa6.56□□□□□ -1.36
MSH5-218ENST00000494646 IQCF2Q8IXL9 164 aa6.56□□□□□ -1.36
MSH5-218ENST00000494646 OR2G3Q8NGZ4 309 aa6.56□□□□□ -1.36
MSH5-218ENST00000494646 AQP10Q96PS8 301 aa6.56□□□□□ -1.36
MSH5-218ENST00000494646 ACTR3CQ9C0K3 210 aaPredicted RBP6.56□□□□□ -1.36
MSH5-218ENST00000494646 PSG8Q9UQ74 426 aa6.56□□□□□ -1.36
MSH5-218ENST00000494646 LOC100131303A0A0U1RQF7 123 aa6.55□□□□□ -1.36
MSH5-218ENST00000494646 M0R2P5 195 aa6.55□□□□□ -1.36
MSH5-218ENST00000494646 MBP02144 154 aa6.55□□□□□ -1.36
MSH5-218ENST00000494646 TCRAP04437 139 aa6.55□□□□□ -1.36
MSH5-218ENST00000494646 SRIP30626 198 aa6.55□□□□□ -1.36
MSH5-218ENST00000494646 KRTAP10-2P60368 255 aa6.55□□□□□ -1.36
MSH5-218ENST00000494646 SERF2P84101 59 aa6.55□□□□□ -1.36
MSH5-218ENST00000494646 TDRG1Q3Y452 100 aa6.55□□□□□ -1.36
MSH5-218ENST00000494646 WDR73Q6P4I2 378 aa6.55□□□□□ -1.36
MSH5-218ENST00000494646 PRNTQ86SH4 94 aa6.55□□□□□ -1.36
MSH5-218ENST00000494646 INO80EQ8NBZ0 244 aaPredicted RBP6.55□□□□□ -1.36
MSH5-218ENST00000494646 SUN5Q8TC36 379 aa6.55□□□□□ -1.36
MSH5-218ENST00000494646 ASB13Q8WXK3 278 aa6.55□□□□□ -1.36
MSH5-218ENST00000494646 PSMG3Q9BT73 122 aaPredicted RBP6.55□□□□□ -1.36
MSH5-218ENST00000494646 SDF2L1Q9HCN8 221 aa6.55□□□□□ -1.36
MSH5-218ENST00000494646 C11orf21Q9P2W6 132 aa6.55□□□□□ -1.36
MSH5-218ENST00000494646 EPDR1Q9UM22 224 aa6.55□□□□□ -1.36
MSH5-218ENST00000494646 VPS13BQ7Z7G8 4022 aa6.54□□□□□ -1.36
MSH5-218ENST00000494646 FXYD6-FXYD2A0A087WZ82 144 aa6.54□□□□□ -1.36
MSH5-218ENST00000494646 TRAV4A0A0B4J268 109 aa6.54□□□□□ -1.36
MSH5-218ENST00000494646 CXorf1O96002 111 aa6.54□□□□□ -1.36
MSH5-218ENST00000494646 GCGP01275 180 aa6.54□□□□□ -1.36
MSH5-218ENST00000494646 WFDC10BQ8IUB3 73 aa6.54□□□□□ -1.36
MSH5-218ENST00000494646 TMEM75Q8N9X5 138 aa6.54□□□□□ -1.36
MSH5-218ENST00000494646 C5orf17Q8NAS9 161 aa6.54□□□□□ -1.36
MSH5-218ENST00000494646 PCNPQ8WW12 178 aaKnown RBP6.54□□□□□ -1.36
MSH5-218ENST00000494646 KCNS1Q96KK3 526 aa6.54□□□□□ -1.36
MSH5-218ENST00000494646 LINC00479Q96M42 142 aa6.54□□□□□ -1.36
MSH5-218ENST00000494646 NDFIP1Q9BT67 221 aa6.54□□□□□ -1.36
MSH5-218ENST00000494646 TNFSF18Q9UNG2 199 aa6.54□□□□□ -1.36
MSH5-218ENST00000494646 IGHV3-73A0A0B4J1V6 119 aa6.53□□□□□ -1.36
MSH5-218ENST00000494646 TRAV34A0A0B4J273 112 aa6.53□□□□□ -1.36
MSH5-218ENST00000494646 GGTLC3B5MD39 225 aa6.53□□□□□ -1.36
MSH5-218ENST00000494646 K7EQM0 130 aa6.53□□□□□ -1.36
MSH5-218ENST00000494646 IGLV2-11P01706 119 aa6.53□□□□□ -1.36
MSH5-218ENST00000494646 ORM1P02763 201 aa6.53□□□□□ -1.36
MSH5-218ENST00000494646 GIPP09681 153 aaPredicted RBP6.53□□□□□ -1.36
MSH5-218ENST00000494646 FGF8P55075 233 aaPredicted RBP6.53□□□□□ -1.36
MSH5-218ENST00000494646 UBE2G2P60604 165 aa6.53□□□□□ -1.36
MSH5-218ENST00000494646 FLI1Q01543 452 aaPredicted RBP6.53□□□□□ -1.36
MSH5-218ENST00000494646 ZNF726P1Q15940 193 aa6.53□□□□□ -1.36
MSH5-218ENST00000494646 ZNF876PQ49A33 203 aa6.53□□□□□ -1.36
MSH5-218ENST00000494646 SMUG1Q53HV7 270 aa6.53□□□□□ -1.36
MSH5-218ENST00000494646 DPPA3Q6W0C5 159 aa6.53□□□□□ -1.36
MSH5-218ENST00000494646 TMEM167BQ9NRX6 74 aa6.53□□□□□ -1.36
MSH5-218ENST00000494646 LY96Q9Y6Y9 160 aa6.53□□□□□ -1.36
MSH5-218ENST00000494646 TRAV9-2A0A087WT02 112 aa6.52□□□□□ -1.37
MSH5-218ENST00000494646 SERTM2A0A1B0GWG4 89 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms