RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 ZNF705FA8MVS1 300 aaPredicted RBP9.51□□□□□ -0.89
ERCC3-209ENST00000494464 ZNF705DP0CH99 300 aaPredicted RBP9.51□□□□□ -0.89
ERCC3-209ENST00000494464 ZNF705BP0CI00 300 aaPredicted RBP9.51□□□□□ -0.89
ERCC3-209ENST00000494464 PSG3Q16557 428 aa9.51□□□□□ -0.89
ERCC3-209ENST00000494464 ZFP82Q8N141 532 aa9.51□□□□□ -0.89
ERCC3-209ENST00000494464 MRPL53Q96EL3 112 aaKnown RBP9.51□□□□□ -0.89
ERCC3-209ENST00000494464 NEU1Q99519 415 aa9.51□□□□□ -0.89
ERCC3-209ENST00000494464 RNASE7Q9H1E1 156 aaKnown RBP9.51□□□□□ -0.89
ERCC3-209ENST00000494464 ZFP30Q9Y2G7 519 aa9.51□□□□□ -0.89
ERCC3-209ENST00000494464 F6UB75 175 aa9.5□□□□□ -0.89
ERCC3-209ENST00000494464 PHOX2AO14813 284 aa9.5□□□□□ -0.89
ERCC3-209ENST00000494464 IGKV3-20P01619 116 aa9.5□□□□□ -0.89
ERCC3-209ENST00000494464 CT83Q5H943 113 aa9.5□□□□□ -0.89
ERCC3-209ENST00000494464 NHLRC2Q8NBF2 726 aa9.5□□□□□ -0.89
ERCC3-209ENST00000494464 OR4B1Q8NGF8 309 aa9.5□□□□□ -0.89
ERCC3-209ENST00000494464 TRAV8-2A0A0B4J237 113 aa9.5□□□□□ -0.89
ERCC3-209ENST00000494464 SMIM27A0A1W2PRY6 76 aa9.5□□□□□ -0.89
ERCC3-209ENST00000494464 C19orf71A6NCJ1 209 aa9.5□□□□□ -0.89
ERCC3-209ENST00000494464 M0R3E3 92 aa9.5□□□□□ -0.89
ERCC3-209ENST00000494464 GATCO43716 136 aaKnown RBP9.5□□□□□ -0.89
ERCC3-209ENST00000494464 TRGC2P03986 189 aa9.5□□□□□ -0.89
ERCC3-209ENST00000494464 TCTAP57738 103 aa9.5□□□□□ -0.89
ERCC3-209ENST00000494464 RPL19P84098 196 aaKnown RBP9.5□□□□□ -0.89
ERCC3-209ENST00000494464 COX8CQ7Z4L0 72 aa9.5□□□□□ -0.89
ERCC3-209ENST00000494464 PSG8Q9UQ74 426 aa9.5□□□□□ -0.89
ERCC3-209ENST00000494464 TRAV8-1A0A0A6YYK1 113 aa9.49□□□□□ -0.89
ERCC3-209ENST00000494464 RBAKDNA6NC62 111 aa9.49□□□□□ -0.89
ERCC3-209ENST00000494464 SMIM9A6NGZ8 99 aa9.49□□□□□ -0.89
ERCC3-209ENST00000494464 ZNF705GA8MUZ8 300 aaPredicted RBP9.49□□□□□ -0.89
ERCC3-209ENST00000494464 NPIPB6E9PJ23 425 aa9.49□□□□□ -0.89
ERCC3-209ENST00000494464 LY6G6CO95867 125 aa9.49□□□□□ -0.89
ERCC3-209ENST00000494464 S100A6P06703 90 aa9.49□□□□□ -0.89
ERCC3-209ENST00000494464 HLA-DMBP28068 263 aa9.49□□□□□ -0.89
ERCC3-209ENST00000494464 FXYD7P58549 80 aa9.49□□□□□ -0.89
ERCC3-209ENST00000494464 AMTNQ6UX39 209 aa9.49□□□□□ -0.89
ERCC3-209ENST00000494464 PRNTQ86SH4 94 aa9.49□□□□□ -0.89
ERCC3-209ENST00000494464 NUDT10Q8NFP7 164 aa9.49□□□□□ -0.89
ERCC3-209ENST00000494464 NUDT11Q96G61 164 aa9.49□□□□□ -0.89
ERCC3-209ENST00000494464 TMEM189A5PLL7 270 aa9.48□□□□□ -0.89
ERCC3-209ENST00000494464 C5orf52A6NGY3 159 aa9.48□□□□□ -0.89
ERCC3-209ENST00000494464 DUSP14O95147 198 aaKnown RBP9.48□□□□□ -0.89
ERCC3-209ENST00000494464 AMBPP02760 352 aa9.48□□□□□ -0.89
ERCC3-209ENST00000494464 COX19Q49B96 90 aa9.48□□□□□ -0.89
ERCC3-209ENST00000494464 LGALS9CQ6DKI2 356 aa9.48□□□□□ -0.89
ERCC3-209ENST00000494464 PRR27Q6MZM9 219 aa9.48□□□□□ -0.89
ERCC3-209ENST00000494464 Q6ZTC4 211 aa9.48□□□□□ -0.89
ERCC3-209ENST00000494464 SGK494Q96LW2 274 aa9.48□□□□□ -0.89
ERCC3-209ENST00000494464 RPP21Q9H633 154 aaKnown RBP9.48□□□□□ -0.89
ERCC3-209ENST00000494464 CELA1Q9UNI1 258 aa9.48□□□□□ -0.89
ERCC3-209ENST00000494464 GOLT1BQ9Y3E0 138 aa9.48□□□□□ -0.89
ERCC3-209ENST00000494464 VPS13DQ5THJ4 4388 aa9.47□□□□□ -0.89
ERCC3-209ENST00000494464 TRAV10A0A0B4J240 114 aa9.47□□□□□ -0.89
ERCC3-209ENST00000494464 HIST1H2BKO60814 126 aa9.47□□□□□ -0.89
ERCC3-209ENST00000494464 HIST1H2BJP06899 126 aa9.47□□□□□ -0.89
ERCC3-209ENST00000494464 HIST1H2BOP23527 126 aa9.47□□□□□ -0.89
ERCC3-209ENST00000494464 HIST1H2BBP33778 126 aa9.47□□□□□ -0.89
ERCC3-209ENST00000494464 HIST1H2BDP58876 126 aa9.47□□□□□ -0.89
ERCC3-209ENST00000494464 HIST1H2BCP62807 126 aa9.47□□□□□ -0.89
ERCC3-209ENST00000494464 HIST2H2BEQ16778 126 aa9.47□□□□□ -0.89
ERCC3-209ENST00000494464 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.47□□□□□ -0.89
ERCC3-209ENST00000494464 IGFL4Q6B9Z1 124 aa9.47□□□□□ -0.89
ERCC3-209ENST00000494464 RNF182Q8N6D2 247 aa9.47□□□□□ -0.89
ERCC3-209ENST00000494464 ZNF738Q8NE65 137 aa9.47□□□□□ -0.89
ERCC3-209ENST00000494464 TSKUQ8WUA8 353 aa9.47□□□□□ -0.89
ERCC3-209ENST00000494464 HIST1H2BHQ93079 126 aa9.47□□□□□ -0.89
ERCC3-209ENST00000494464 HIST1H2BNQ99877 126 aa9.47□□□□□ -0.89
ERCC3-209ENST00000494464 HIST1H2BMQ99879 126 aa9.47□□□□□ -0.89
ERCC3-209ENST00000494464 FAM231BA6NCW3 169 aa9.46□□□□□ -0.9
ERCC3-209ENST00000494464 P01737 135 aa9.46□□□□□ -0.9
ERCC3-209ENST00000494464 TRGC1P0CF51 173 aa9.46□□□□□ -0.9
ERCC3-209ENST00000494464 SAPCD1Q5SSQ6 148 aa9.46□□□□□ -0.9
ERCC3-209ENST00000494464 RASL11AQ6T310 242 aa9.46□□□□□ -0.9
ERCC3-209ENST00000494464 C1orf158Q8N1D5 194 aa9.46□□□□□ -0.9
ERCC3-209ENST00000494464 FRZBQ92765 325 aa9.46□□□□□ -0.9
ERCC3-209ENST00000494464 GFRA4Q9GZZ7 299 aa9.46□□□□□ -0.9
ERCC3-209ENST00000494464 EPPK1P58107 5090 aaKnown RBP9.45□□□□□ -0.9
ERCC3-209ENST00000494464 KMT2AQ03164 3969 aa9.45□□□□□ -0.9
ERCC3-209ENST00000494464 IGHV3OR16-12A0A075B7B8 117 aa9.45□□□□□ -0.9
ERCC3-209ENST00000494464 IGKV2-40A0A087WW87 121 aaPredicted RBP9.45□□□□□ -0.9
ERCC3-209ENST00000494464 TEX48A0A1B0GUV7 120 aa9.45□□□□□ -0.9
ERCC3-209ENST00000494464 IGKV2D-40P01614 121 aaPredicted RBP9.45□□□□□ -0.9
ERCC3-209ENST00000494464 MT-ND6P03923 174 aa9.45□□□□□ -0.9
ERCC3-209ENST00000494464 C12orf74Q32Q52 190 aa9.45□□□□□ -0.9
ERCC3-209ENST00000494464 WDR73Q6P4I2 378 aa9.45□□□□□ -0.9
ERCC3-209ENST00000494464 OR8A1Q8NGG7 326 aa9.45□□□□□ -0.9
ERCC3-209ENST00000494464 DAZAP1Q96EP5 407 aaKnown RBP9.45□□□□□ -0.9
ERCC3-209ENST00000494464 ZC2HC1AQ96GY0 325 aa9.45□□□□□ -0.9
ERCC3-209ENST00000494464 NAT8BQ9UHF3 227 aa9.45□□□□□ -0.9
ERCC3-209ENST00000494464 DNAH6Q9C0G6 4158 aa9.44□□□□□ -0.9
ERCC3-209ENST00000494464 A8MWL6 223 aa9.44□□□□□ -0.9
ERCC3-209ENST00000494464 INSP01308 110 aa9.44□□□□□ -0.9
ERCC3-209ENST00000494464 SPART-AS1P0CW21 52 aa9.44□□□□□ -0.9
ERCC3-209ENST00000494464 CT45A10P0DMU9 189 aa9.44□□□□□ -0.9
ERCC3-209ENST00000494464 SNRPEP62304 92 aaKnown RBP9.44□□□□□ -0.9
ERCC3-209ENST00000494464 SPINK13Q1W4C9 94 aa9.44□□□□□ -0.9
ERCC3-209ENST00000494464 GNB1LQ9BYB4 327 aa9.44□□□□□ -0.9
ERCC3-209ENST00000494464 APLNQ9ULZ1 77 aa9.44□□□□□ -0.9
ERCC3-209ENST00000494464 IGLL5B9A064 214 aa9.43□□□□□ -0.9
ERCC3-209ENST00000494464 M0R2Z0 102 aa9.43□□□□□ -0.9
ERCC3-209ENST00000494464 CRXO43186 299 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 156.4 ms