RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 SPCS2Q15005 226 aa3.48□□□□□ -1.85
PTCD3-219ENST00000494323 ACOT7LQ6ZUV0 252 aa3.48□□□□□ -1.85
PTCD3-219ENST00000494323 LINC00612Q8N6U2 182 aa3.48□□□□□ -1.85
PTCD3-219ENST00000494323 ZNF431Q8TF32 576 aaPredicted RBP3.48□□□□□ -1.85
PTCD3-219ENST00000494323 FRZBQ92765 325 aa3.48□□□□□ -1.85
PTCD3-219ENST00000494323 CIB3Q96Q77 187 aaPredicted RBP3.48□□□□□ -1.85
PTCD3-219ENST00000494323 CHCHD5Q9BSY4 110 aa3.48□□□□□ -1.85
PTCD3-219ENST00000494323 ARL6Q9H0F7 186 aa3.48□□□□□ -1.85
PTCD3-219ENST00000494323 JPT2Q9H910 190 aa3.48□□□□□ -1.85
PTCD3-219ENST00000494323 RABL2BQ9UNT1 228 aa3.48□□□□□ -1.85
PTCD3-219ENST00000494323 TRGV2A0A075B6R0 118 aa3.47□□□□□ -1.85
PTCD3-219ENST00000494323 LINC00854A0A1B0GVQ3 168 aa3.47□□□□□ -1.85
PTCD3-219ENST00000494323 H3BNG1 76 aa3.47□□□□□ -1.85
PTCD3-219ENST00000494323 SLC17A3O00476 420 aa3.47□□□□□ -1.85
PTCD3-219ENST00000494323 MRPS12O15235 138 aaKnown RBP3.47□□□□□ -1.85
PTCD3-219ENST00000494323 SLC25A6P12236 298 aa3.47□□□□□ -1.85
PTCD3-219ENST00000494323 PLP1P60201 277 aa3.47□□□□□ -1.85
PTCD3-219ENST00000494323 POLR2GP62487 172 aaKnown RBP eCLIP3.47□□□□□ -1.85
PTCD3-219ENST00000494323 PPP1R1AQ13522 171 aa3.47□□□□□ -1.85
PTCD3-219ENST00000494323 ZNF846Q147U1 533 aa3.47□□□□□ -1.85
PTCD3-219ENST00000494323 TMEM128Q5BJH2 165 aa3.47□□□□□ -1.85
PTCD3-219ENST00000494323 REG3GQ6UW15 175 aa3.47□□□□□ -1.85
PTCD3-219ENST00000494323 LYPD5Q6UWN5 251 aa3.47□□□□□ -1.85
PTCD3-219ENST00000494323 LINC00305Q7Z4B0 112 aa3.47□□□□□ -1.85
PTCD3-219ENST00000494323 DYNC2LI1Q8TCX1 351 aa3.47□□□□□ -1.85
PTCD3-219ENST00000494323 ARV1Q9H2C2 271 aa3.47□□□□□ -1.85
PTCD3-219ENST00000494323 ZNF331Q9NQX6 463 aaPredicted RBP3.47□□□□□ -1.85
PTCD3-219ENST00000494323 PSENENQ9NZ42 101 aa3.47□□□□□ -1.85
PTCD3-219ENST00000494323 RABL2AQ9UBK7 228 aaPredicted RBP3.47□□□□□ -1.85
PTCD3-219ENST00000494323 A0A087WTM6 91 aa3.46□□□□□ -1.86
PTCD3-219ENST00000494323 TRGV1A0A0A0MS02 117 aa3.46□□□□□ -1.86
PTCD3-219ENST00000494323 TRAV5A0A0B4J249 113 aa3.46□□□□□ -1.86
PTCD3-219ENST00000494323 DUXBA0A1W2PPF3 345 aa3.46□□□□□ -1.86
PTCD3-219ENST00000494323 FABP12A6NFH5 140 aa3.46□□□□□ -1.86
PTCD3-219ENST00000494323 H3BQ15 152 aa3.46□□□□□ -1.86
PTCD3-219ENST00000494323 K7EQM0 130 aa3.46□□□□□ -1.86
PTCD3-219ENST00000494323 GOSR2O14653 212 aa3.46□□□□□ -1.86
PTCD3-219ENST00000494323 SSSCA1O60232 199 aa3.46□□□□□ -1.86
PTCD3-219ENST00000494323 ZNF324O75467 553 aaPredicted RBP3.46□□□□□ -1.86
PTCD3-219ENST00000494323 SFT2D2O95562 160 aa3.46□□□□□ -1.86
PTCD3-219ENST00000494323 IGHV3-53P01767 116 aa3.46□□□□□ -1.86
PTCD3-219ENST00000494323 METTL15P1P0C7V9 234 aa3.46□□□□□ -1.86
PTCD3-219ENST00000494323 RNASE4P34096 147 aaKnown RBP3.46□□□□□ -1.86
PTCD3-219ENST00000494323 SLC38A11Q08AI6 406 aa3.46□□□□□ -1.86
PTCD3-219ENST00000494323 DAZ2Q13117 558 aaKnown RBP3.46□□□□□ -1.86
PTCD3-219ENST00000494323 ERCC8Q13216 396 aa3.46□□□□□ -1.86
PTCD3-219ENST00000494323 SPANXN2Q5MJ10 180 aa3.46□□□□□ -1.86
PTCD3-219ENST00000494323 Q6ZQT7 251 aa3.46□□□□□ -1.86
PTCD3-219ENST00000494323 MCFD2Q8NI22 146 aa3.46□□□□□ -1.86
PTCD3-219ENST00000494323 C18orf15Q96N68 181 aa3.46□□□□□ -1.86
PTCD3-219ENST00000494323 C20orf144Q9BQM9 153 aa3.46□□□□□ -1.86
PTCD3-219ENST00000494323 NPVFQ9HCQ7 196 aa3.46□□□□□ -1.86
PTCD3-219ENST00000494323 TP53TG3Q9ULZ0 132 aa3.46□□□□□ -1.86
PTCD3-219ENST00000494323 FUT9Q9Y231 359 aa3.46□□□□□ -1.86
PTCD3-219ENST00000494323 KLF12Q9Y4X4 402 aa3.46□□□□□ -1.86
PTCD3-219ENST00000494323 AGPAT2O15120 278 aa3.45□□□□□ -1.86
PTCD3-219ENST00000494323 KRTAP5-9P26371 169 aa3.45□□□□□ -1.86
PTCD3-219ENST00000494323 LEPP41159 167 aa3.45□□□□□ -1.86
PTCD3-219ENST00000494323 SELENOTP62341 195 aa3.45□□□□□ -1.86
PTCD3-219ENST00000494323 MAJINQ3KP22 176 aa3.45□□□□□ -1.86
PTCD3-219ENST00000494323 PYDC2Q56P42 97 aa3.45□□□□□ -1.86
PTCD3-219ENST00000494323 C10orf113Q5VZT2 155 aa3.45□□□□□ -1.86
PTCD3-219ENST00000494323 KRTAP5-4Q6L8H1 288 aa3.45□□□□□ -1.86
PTCD3-219ENST00000494323 LCN15Q6UWW0 184 aa3.45□□□□□ -1.86
PTCD3-219ENST00000494323 BPIFA4PQ86YQ2 179 aa3.45□□□□□ -1.86
PTCD3-219ENST00000494323 TOMM5Q8N4H5 51 aa3.45□□□□□ -1.86
PTCD3-219ENST00000494323 C11orf72Q8NBR9 251 aa3.45□□□□□ -1.86
PTCD3-219ENST00000494323 OR10P1Q8NGE3 313 aa3.45□□□□□ -1.86
PTCD3-219ENST00000494323 SMIM8Q96KF7 97 aa3.45□□□□□ -1.86
PTCD3-219ENST00000494323 SOSTQ9BQB4 213 aa3.45□□□□□ -1.86
PTCD3-219ENST00000494323 PYGO2Q9BRQ0 406 aa3.45□□□□□ -1.86
PTCD3-219ENST00000494323 SLC50A1Q9BRV3 221 aa3.45□□□□□ -1.86
PTCD3-219ENST00000494323 CCDC32Q9BV29 185 aa3.45□□□□□ -1.86
PTCD3-219ENST00000494323 HHLA3Q9XRX5 114 aa3.45□□□□□ -1.86
PTCD3-219ENST00000494323 RNF24Q9Y225 148 aa3.45□□□□□ -1.86
PTCD3-219ENST00000494323 FAT1Q14517 4588 aa3.44□□□□□ -1.86
PTCD3-219ENST00000494323 TRAV9-2A0A087WT02 112 aa3.44□□□□□ -1.86
PTCD3-219ENST00000494323 PIGBOS1A0A0B4J2F0 54 aa3.44□□□□□ -1.86
PTCD3-219ENST00000494323 TRBV7-9A0A0J9YWB2 115 aa3.44□□□□□ -1.86
PTCD3-219ENST00000494323 C9orf170A2RU37 121 aa3.44□□□□□ -1.86
PTCD3-219ENST00000494323 C7orf71A4D174 169 aa3.44□□□□□ -1.86
PTCD3-219ENST00000494323 M0R3E3 92 aa3.44□□□□□ -1.86
PTCD3-219ENST00000494323 COX7A2P2O60397 106 aa3.44□□□□□ -1.86
PTCD3-219ENST00000494323 SPINK4O60575 86 aa3.44□□□□□ -1.86
PTCD3-219ENST00000494323 GPX1P07203 203 aa3.44□□□□□ -1.86
PTCD3-219ENST00000494323 IGLC2P0DOY2 106 aa3.44□□□□□ -1.86
PTCD3-219ENST00000494323 FAUP35544 74 aaKnown RBP3.44□□□□□ -1.86
PTCD3-219ENST00000494323 CRYBA4P53673 196 aa3.44□□□□□ -1.86
PTCD3-219ENST00000494323 DEFA1P59665 94 aa3.44□□□□□ -1.86
PTCD3-219ENST00000494323 DEFA3P59666 94 aa3.44□□□□□ -1.86
PTCD3-219ENST00000494323 BTN1A1Q13410 526 aa3.44□□□□□ -1.86
PTCD3-219ENST00000494323 MRPL23Q16540 153 aaKnown RBP3.44□□□□□ -1.86
PTCD3-219ENST00000494323 ZNF506Q5JVG8 444 aa3.44□□□□□ -1.86
PTCD3-219ENST00000494323 MIC13Q5XKP0 118 aa3.44□□□□□ -1.86
PTCD3-219ENST00000494323 TMEM14EPQ6UXP3 125 aa3.44□□□□□ -1.86
PTCD3-219ENST00000494323 NEGR1Q7Z3B1 354 aa3.44□□□□□ -1.86
PTCD3-219ENST00000494323 S100A7AQ86SG5 101 aa3.44□□□□□ -1.86
PTCD3-219ENST00000494323 WFDC10BQ8IUB3 73 aa3.44□□□□□ -1.86
PTCD3-219ENST00000494323 RASL10AQ92737 203 aa3.44□□□□□ -1.86
PTCD3-219ENST00000494323 MGST2Q99735 147 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms