RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 ZNF22P17026 224 aaPredicted RBP1.38□□□□□ -2.19
PTPN12-212ENST00000494248 FAUP35544 74 aaKnown RBP1.38□□□□□ -2.19
PTPN12-212ENST00000494248 RPS10P46783 165 aaKnown RBP1.38□□□□□ -2.19
PTPN12-212ENST00000494248 HINT1P49773 126 aaPredicted RBP1.38□□□□□ -2.19
PTPN12-212ENST00000494248 GNGT1P63211 74 aa1.38□□□□□ -2.19
PTPN12-212ENST00000494248 CCL8P80075 99 aa1.38□□□□□ -2.19
PTPN12-212ENST00000494248 NNATQ16517 81 aa1.38□□□□□ -2.19
PTPN12-212ENST00000494248 DEFB116Q30KQ4 102 aa1.38□□□□□ -2.19
PTPN12-212ENST00000494248 FAM27BQ5VT28 67 aa1.38□□□□□ -2.19
PTPN12-212ENST00000494248 HEPN1Q6WQI6 88 aa1.38□□□□□ -2.19
PTPN12-212ENST00000494248 Q6ZQT0 140 aa1.38□□□□□ -2.19
PTPN12-212ENST00000494248 TMEM136Q6ZRR5 245 aa1.38□□□□□ -2.19
PTPN12-212ENST00000494248 HMGN2P46Q86SG4 172 aa1.38□□□□□ -2.19
PTPN12-212ENST00000494248 OR10AG1Q8NH19 301 aa1.38□□□□□ -2.19
PTPN12-212ENST00000494248 TMEM141Q96I45 108 aa1.38□□□□□ -2.19
PTPN12-212ENST00000494248 CXCL16Q9H2A7 254 aa1.38□□□□□ -2.19
PTPN12-212ENST00000494248 MRPL35Q9NZE8 188 aaKnown RBP1.38□□□□□ -2.19
PTPN12-212ENST00000494248 SPCS1Q9Y6A9 102 aa1.38□□□□□ -2.19
PTPN12-212ENST00000494248 TDRD6O60522 2096 aaKnown RBP1.38□□□□□ -2.19
PTPN12-212ENST00000494248 DSCAML1Q8TD84 2053 aa1.38□□□□□ -2.19
PTPN12-212ENST00000494248 KIF13AQ9H1H9 1805 aa1.38□□□□□ -2.19
PTPN12-212ENST00000494248 DIP2BQ9P265 1576 aa1.38□□□□□ -2.19
PTPN12-212ENST00000494248 LAMC3Q9Y6N6 1575 aa1.38□□□□□ -2.19
PTPN12-212ENST00000494248 GON4LQ3T8J9 2241 aa1.38□□□□□ -2.19
PTPN12-212ENST00000494248 SCN2AQ99250 2005 aa1.37□□□□□ -2.19
PTPN12-212ENST00000494248 EPRSP07814 1512 aaKnown RBP1.37□□□□□ -2.19
PTPN12-212ENST00000494248 TICRRQ7Z2Z1 1910 aa1.37□□□□□ -2.19
PTPN12-212ENST00000494248 RAI1Q7Z5J4 1906 aaPredicted RBP1.37□□□□□ -2.19
PTPN12-212ENST00000494248 ALPK3Q96L96 1907 aa1.37□□□□□ -2.19
PTPN12-212ENST00000494248 TOPAZ1Q8N9V7 1692 aa1.37□□□□□ -2.19
PTPN12-212ENST00000494248 ROBO1Q9Y6N7 1651 aa1.37□□□□□ -2.19
PTPN12-212ENST00000494248 A0A087WSZ3 146 aa1.37□□□□□ -2.19
PTPN12-212ENST00000494248 TRBV6-6A0A0A6YYG2 114 aa1.37□□□□□ -2.19
PTPN12-212ENST00000494248 IGHV1-18A0A0C4DH31 117 aa1.37□□□□□ -2.19
PTPN12-212ENST00000494248 LOC107984156A0A0G2JMH3 177 aa1.37□□□□□ -2.19
PTPN12-212ENST00000494248 A0A1W2PPM0 123 aa1.37□□□□□ -2.19
PTPN12-212ENST00000494248 hADV29S1A0JD25 119 aa1.37□□□□□ -2.19
PTPN12-212ENST00000494248 NAP1L6A6NFF2 107 aa1.37□□□□□ -2.19
PTPN12-212ENST00000494248 C11orf86A6NJI1 115 aa1.37□□□□□ -2.19
PTPN12-212ENST00000494248 B4DSR2 109 aa1.37□□□□□ -2.19
PTPN12-212ENST00000494248 E7EUB6 86 aa1.37□□□□□ -2.19
PTPN12-212ENST00000494248 NUPR1O60356 82 aa1.37□□□□□ -2.19
PTPN12-212ENST00000494248 CRPP02741 224 aa1.37□□□□□ -2.19
PTPN12-212ENST00000494248 BAALC-AS2P0C853 105 aa1.37□□□□□ -2.19
PTPN12-212ENST00000494248 ADCYAP1P18509 176 aa1.37□□□□□ -2.19
PTPN12-212ENST00000494248 DSCR4P56555 118 aaPredicted RBP1.37□□□□□ -2.19
PTPN12-212ENST00000494248 RBM3P98179 157 aaKnown RBP1.37□□□□□ -2.19
PTPN12-212ENST00000494248 ZNF816Q0VGE8 651 aaPredicted RBP1.37□□□□□ -2.19
PTPN12-212ENST00000494248 ZNF345Q14585 488 aa1.37□□□□□ -2.19
PTPN12-212ENST00000494248 RHOHQ15669 191 aa1.37□□□□□ -2.19
PTPN12-212ENST00000494248 LGALSLQ3ZCW2 172 aaPredicted RBP1.37□□□□□ -2.19
PTPN12-212ENST00000494248 SPANXN5Q5MJ07 72 aa1.37□□□□□ -2.19
PTPN12-212ENST00000494248 BVES-AS1Q5T3Y7 98 aa1.37□□□□□ -2.19
PTPN12-212ENST00000494248 C1orf134Q5TEV5 83 aa1.37□□□□□ -2.19
PTPN12-212ENST00000494248 Q6ZS52 159 aa1.37□□□□□ -2.19
PTPN12-212ENST00000494248 ZNF826PQ6ZT77 177 aa1.37□□□□□ -2.19
PTPN12-212ENST00000494248 ARPINQ7Z6K5 226 aa1.37□□□□□ -2.19
PTPN12-212ENST00000494248 ARL17AQ8IVW1 177 aa1.37□□□□□ -2.19
PTPN12-212ENST00000494248 LINC00269Q8N2A0 174 aa1.37□□□□□ -2.19
PTPN12-212ENST00000494248 FAM19A2Q8N3H0 131 aa1.37□□□□□ -2.19
PTPN12-212ENST00000494248 SERP2Q8N6R1 65 aa1.37□□□□□ -2.19
PTPN12-212ENST00000494248 ST20-AS1Q8NBB2 130 aa1.37□□□□□ -2.19
PTPN12-212ENST00000494248 FAM213BQ8TBF2 198 aa1.37□□□□□ -2.19
PTPN12-212ENST00000494248 MUCL1Q96DR8 90 aa1.37□□□□□ -2.19
PTPN12-212ENST00000494248 TRGV9Q99603 122 aa1.37□□□□□ -2.19
PTPN12-212ENST00000494248 CYTL1Q9NRR1 136 aa1.37□□□□□ -2.19
PTPN12-212ENST00000494248 NDUFA12Q9UI09 145 aa1.37□□□□□ -2.19
PTPN12-212ENST00000494248 BLMP54132 1417 aaPredicted RBP1.37□□□□□ -2.19
PTPN12-212ENST00000494248 CCDC88AQ3V6T2 1871 aa1.37□□□□□ -2.19
PTPN12-212ENST00000494248 GOLGA3Q08378 1498 aa1.37□□□□□ -2.19
PTPN12-212ENST00000494248 COL1A2P08123 1366 aa1.36□□□□□ -2.19
PTPN12-212ENST00000494248 ADGRB3O60242 1522 aa1.36□□□□□ -2.19
PTPN12-212ENST00000494248 LMTK2Q8IWU2 1503 aa1.36□□□□□ -2.19
PTPN12-212ENST00000494248 UGGT2Q9NYU1 1516 aa1.36□□□□□ -2.19
PTPN12-212ENST00000494248 ZSWIM8A7E2V4 1837 aa1.36□□□□□ -2.19
PTPN12-212ENST00000494248 SBF2Q86WG5 1849 aa1.36□□□□□ -2.19
PTPN12-212ENST00000494248 KIF20BQ96Q89 1820 aa1.36□□□□□ -2.19
PTPN12-212ENST00000494248 IGLV10-54A0A075B6I4 117 aa1.36□□□□□ -2.19
PTPN12-212ENST00000494248 IGKV1D-17A0A075B6S4 117 aa1.36□□□□□ -2.19
PTPN12-212ENST00000494248 TRAV3A0A0B4J244 114 aa1.36□□□□□ -2.19
PTPN12-212ENST00000494248 TRAV17A0A0B4J275 112 aa1.36□□□□□ -2.19
PTPN12-212ENST00000494248 A0A1B0GU33 70 aa1.36□□□□□ -2.19
PTPN12-212ENST00000494248 KANTRA0A1W2PQU2 76 aa1.36□□□□□ -2.19
PTPN12-212ENST00000494248 A6NIN4 97 aa1.36□□□□□ -2.19
PTPN12-212ENST00000494248 C5orf67F2Z3F1 127 aa1.36□□□□□ -2.19
PTPN12-212ENST00000494248 CCL16O15467 120 aa1.36□□□□□ -2.19
PTPN12-212ENST00000494248 CISD3P0C7P0 127 aa1.36□□□□□ -2.19
PTPN12-212ENST00000494248 MGST1P10620 155 aaKnown RBP1.36□□□□□ -2.19
PTPN12-212ENST00000494248 DEFA4P12838 97 aa1.36□□□□□ -2.19
PTPN12-212ENST00000494248 MIFP14174 115 aa1.36□□□□□ -2.19
PTPN12-212ENST00000494248 GNG11P61952 73 aa1.36□□□□□ -2.19
PTPN12-212ENST00000494248 CASC2Q6XLA1 102 aa1.36□□□□□ -2.19
PTPN12-212ENST00000494248 CYB561D1Q8N8Q1 229 aa1.36□□□□□ -2.19
PTPN12-212ENST00000494248 Q8NAQ8 132 aa1.36□□□□□ -2.19
PTPN12-212ENST00000494248 UBALD1Q8TB05 177 aa1.36□□□□□ -2.19
PTPN12-212ENST00000494248 KLF14Q8TD94 323 aaPredicted RBP1.36□□□□□ -2.19
PTPN12-212ENST00000494248 LINC01600Q96MT4 127 aa1.36□□□□□ -2.19
PTPN12-212ENST00000494248 AMELYQ99218 206 aa1.36□□□□□ -2.19
PTPN12-212ENST00000494248 CFAP74Q9C0B2 1584 aa1.36□□□□□ -2.19
PTPN12-212ENST00000494248 NDUFB11Q9NX14 153 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms