RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 TDRG1Q3Y452 100 aa10.47□□□□□ -0.73
BRCA1-223ENST00000494123 EDA2RQ9HAV5 297 aa10.47□□□□□ -0.73
BRCA1-223ENST00000494123 TP53TG3Q9ULZ0 132 aa10.47□□□□□ -0.73
BRCA1-223ENST00000494123 IGLV2-8P01709 118 aa10.46□□□□□ -0.74
BRCA1-223ENST00000494123 C11orf21Q9P2W6 132 aa10.46□□□□□ -0.74
BRCA1-223ENST00000494123 HUWE1Q7Z6Z7 4374 aaKnown RBP10.45□□□□□ -0.74
BRCA1-223ENST00000494123 M0R036 132 aa10.45□□□□□ -0.74
BRCA1-223ENST00000494123 ZNF415Q09FC8 603 aa10.45□□□□□ -0.74
BRCA1-223ENST00000494123 FAM74A3Q4VXF1 159 aa10.45□□□□□ -0.74
BRCA1-223ENST00000494123 SOHLH1Q5JUK2 328 aa10.45□□□□□ -0.74
BRCA1-223ENST00000494123 DAZAP1Q96EP5 407 aaKnown RBP10.45□□□□□ -0.74
BRCA1-223ENST00000494123 TEX48A0A1B0GUV7 120 aa10.44□□□□□ -0.74
BRCA1-223ENST00000494123 CXorf65A6NEN9 183 aa10.44□□□□□ -0.74
BRCA1-223ENST00000494123 B4DEV8 164 aa10.44□□□□□ -0.74
BRCA1-223ENST00000494123 GNRH2O43555 120 aa10.44□□□□□ -0.74
BRCA1-223ENST00000494123 TYMSP04818 313 aa10.44□□□□□ -0.74
BRCA1-223ENST00000494123 SPART-AS1P0CW21 52 aa10.44□□□□□ -0.74
BRCA1-223ENST00000494123 OR5I1Q13606 314 aa10.44□□□□□ -0.74
BRCA1-223ENST00000494123 IBA57Q5T440 356 aaKnown RBP10.44□□□□□ -0.74
BRCA1-223ENST00000494123 COMMD7Q86VX2 200 aa10.44□□□□□ -0.74
BRCA1-223ENST00000494123 OCC1Q8TAD7 63 aa10.44□□□□□ -0.74
BRCA1-223ENST00000494123 C11orf45Q8TAV5 145 aa10.44□□□□□ -0.74
BRCA1-223ENST00000494123 GSN-AS1Q9NRJ2 163 aa10.44□□□□□ -0.74
BRCA1-223ENST00000494123 TIMM8BQ9Y5J9 83 aaPredicted RBP10.44□□□□□ -0.74
BRCA1-223ENST00000494123 PLAC8L1A1L4L8 177 aa10.44□□□□□ -0.74
BRCA1-223ENST00000494123 SFTA3P0C7M3 94 aa10.44□□□□□ -0.74
BRCA1-223ENST00000494123 FAM222AQ5U5X8 452 aa10.44□□□□□ -0.74
BRCA1-223ENST00000494123 NOP10Q9NPE3 64 aaKnown RBP10.44□□□□□ -0.74
BRCA1-223ENST00000494123 TMSB15BA0A087X1C1 80 aa10.43□□□□□ -0.74
BRCA1-223ENST00000494123 IGKV3D-20A0A0C4DH25 116 aa10.43□□□□□ -0.74
BRCA1-223ENST00000494123 TMEM241Q24JQ0 296 aa10.43□□□□□ -0.74
BRCA1-223ENST00000494123 LINC01559Q495D7 138 aa10.43□□□□□ -0.74
BRCA1-223ENST00000494123 UQCC3Q6UW78 93 aa10.43□□□□□ -0.74
BRCA1-223ENST00000494123 C11orf72Q8NBR9 251 aa10.43□□□□□ -0.74
BRCA1-223ENST00000494123 MDFICQ9P1T7 246 aa10.43□□□□□ -0.74
BRCA1-223ENST00000494123 DKK2Q9UBU2 259 aa10.43□□□□□ -0.74
BRCA1-223ENST00000494123 CELA1Q9UNI1 258 aa10.43□□□□□ -0.74
BRCA1-223ENST00000494123 LY96Q9Y6Y9 160 aa10.43□□□□□ -0.74
BRCA1-223ENST00000494123 IGHV3-16A0A0C4DH30 117 aa10.42□□□□□ -0.74
BRCA1-223ENST00000494123 LINC00862A6NCI5 91 aa10.42□□□□□ -0.74
BRCA1-223ENST00000494123 LYRM9A8MSI8 78 aa10.42□□□□□ -0.74
BRCA1-223ENST00000494123 KRBOX1C9JBD0 128 aa10.42□□□□□ -0.74
BRCA1-223ENST00000494123 K7EN84 100 aa10.42□□□□□ -0.74
BRCA1-223ENST00000494123 S100A4P26447 101 aaKnown RBP10.42□□□□□ -0.74
BRCA1-223ENST00000494123 ASIPP42127 132 aa10.42□□□□□ -0.74
BRCA1-223ENST00000494123 TCL1AP56279 114 aa10.42□□□□□ -0.74
BRCA1-223ENST00000494123 IL17DQ8TAD2 202 aa10.42□□□□□ -0.74
BRCA1-223ENST00000494123 WWC2-AS2Q96NR7 200 aa10.42□□□□□ -0.74
BRCA1-223ENST00000494123 P01737 135 aa10.41□□□□□ -0.74
BRCA1-223ENST00000494123 DAZ2Q13117 558 aaKnown RBP10.41□□□□□ -0.74
BRCA1-223ENST00000494123 LINC01551Q86U37 167 aa10.41□□□□□ -0.74
BRCA1-223ENST00000494123 NAT8Q9UHE5 227 aa10.41□□□□□ -0.74
BRCA1-223ENST00000494123 GRIFINA4D1Z8 144 aa10.4□□□□□ -0.74
BRCA1-223ENST00000494123 C19orf71A6NCJ1 209 aa10.4□□□□□ -0.74
BRCA1-223ENST00000494123 DEFB130BP0DP73 79 aa10.4□□□□□ -0.74
BRCA1-223ENST00000494123 DEFB130AP0DP74 79 aa10.4□□□□□ -0.74
BRCA1-223ENST00000494123 NANOS2P60321 138 aaKnown RBP10.4□□□□□ -0.74
BRCA1-223ENST00000494123 RPL19P84098 196 aaKnown RBP10.4□□□□□ -0.74
BRCA1-223ENST00000494123 SPXQ9BT56 116 aa10.4□□□□□ -0.74
BRCA1-223ENST00000494123 TRGV1A0A0A0MS02 117 aa10.4□□□□□ -0.75
BRCA1-223ENST00000494123 DAD1P61803 113 aa10.4□□□□□ -0.75
BRCA1-223ENST00000494123 ADIRFQ15847 76 aa10.4□□□□□ -0.75
BRCA1-223ENST00000494123 OR2D3Q8NGH3 330 aa10.4□□□□□ -0.75
BRCA1-223ENST00000494123 RNASE7Q9H1E1 156 aaKnown RBP10.4□□□□□ -0.75
BRCA1-223ENST00000494123 ERVFC1-1P60608 527 aa10.39□□□□□ -0.75
BRCA1-223ENST00000494123 NUDT10Q8NFP7 164 aa10.39□□□□□ -0.75
BRCA1-223ENST00000494123 NUDT11Q96G61 164 aa10.39□□□□□ -0.75
BRCA1-223ENST00000494123 GAGE12BA1L429 117 aa10.38□□□□□ -0.75
BRCA1-223ENST00000494123 XKRY2A2RUG3 117 aa10.38□□□□□ -0.75
BRCA1-223ENST00000494123 H3BVH4 76 aa10.38□□□□□ -0.75
BRCA1-223ENST00000494123 SPINK4O60575 86 aa10.38□□□□□ -0.75
BRCA1-223ENST00000494123 GAGE7O76087 117 aa10.38□□□□□ -0.75
BRCA1-223ENST00000494123 GAGE12FP0CL80 117 aa10.38□□□□□ -0.75
BRCA1-223ENST00000494123 GAGE12GP0CL81 117 aa10.38□□□□□ -0.75
BRCA1-223ENST00000494123 GAGE12IP0CL82 117 aa10.38□□□□□ -0.75
BRCA1-223ENST00000494123 RPS20P60866 119 aaKnown RBP10.38□□□□□ -0.75
BRCA1-223ENST00000494123 RPL23P62829 140 aaKnown RBP10.38□□□□□ -0.75
BRCA1-223ENST00000494123 C12orf74Q32Q52 190 aa10.38□□□□□ -0.75
BRCA1-223ENST00000494123 MRPL16Q9NX20 251 aaKnown RBP10.38□□□□□ -0.75
BRCA1-223ENST00000494123 M0R2P5 195 aa10.37□□□□□ -0.75
BRCA1-223ENST00000494123 LGALS9BQ3B8N2 356 aa10.37□□□□□ -0.75
BRCA1-223ENST00000494123 Q6ZTI0 123 aa10.37□□□□□ -0.75
BRCA1-223ENST00000494123 FAM231DQ6ZW35 169 aa10.37□□□□□ -0.75
BRCA1-223ENST00000494123 C9orf85Q96MD7 179 aa10.37□□□□□ -0.75
BRCA1-223ENST00000494123 RPP21Q9H633 154 aaKnown RBP10.37□□□□□ -0.75
BRCA1-223ENST00000494123 IL36BQ9NZH7 164 aa10.37□□□□□ -0.75
BRCA1-223ENST00000494123 TRGV2A0A075B6R0 118 aa10.36□□□□□ -0.75
BRCA1-223ENST00000494123 TMEM218A2RU14 115 aa10.36□□□□□ -0.75
BRCA1-223ENST00000494123 GATCO43716 136 aaKnown RBP10.36□□□□□ -0.75
BRCA1-223ENST00000494123 CXCL1P09341 107 aa10.36□□□□□ -0.75
BRCA1-223ENST00000494123 ARMS2P0C7Q2 107 aa10.36□□□□□ -0.75
BRCA1-223ENST00000494123 RNASE3P12724 160 aaKnown RBP10.36□□□□□ -0.75
BRCA1-223ENST00000494123 DNLZQ5SXM8 178 aa10.36□□□□□ -0.75
BRCA1-223ENST00000494123 Q6ZTC4 211 aa10.36□□□□□ -0.75
BRCA1-223ENST00000494123 ISOC2Q96AB3 205 aa10.36□□□□□ -0.75
BRCA1-223ENST00000494123 F8W036 122 aa10.36□□□□□ -0.75
BRCA1-223ENST00000494123 C15orf54Q8N8G6 183 aa10.36□□□□□ -0.75
BRCA1-223ENST00000494123 MUC7Q8TAX7 377 aa10.36□□□□□ -0.75
BRCA1-223ENST00000494123 PHLDA3Q9Y5J5 127 aa10.36□□□□□ -0.75
BRCA1-223ENST00000494123 GZMBP10144 247 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms