RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 FAM231CP0DMU5 169 aa9.05□□□□□ -0.96
BRCA1-222ENST00000493919 HILS1P60008 231 aa9.05□□□□□ -0.96
BRCA1-222ENST00000493919 ARL16Q0P5N6 197 aa9.05□□□□□ -0.96
BRCA1-222ENST00000493919 UNC119Q13432 240 aa9.05□□□□□ -0.96
BRCA1-222ENST00000493919 LINC00596Q86U02 117 aa9.05□□□□□ -0.96
BRCA1-222ENST00000493919 A8MWV9 139 aa9.04□□□□□ -0.96
BRCA1-222ENST00000493919 LEPROTL1O95214 131 aa9.04□□□□□ -0.96
BRCA1-222ENST00000493919 BRD3OSQ6XYD6 125 aa9.04□□□□□ -0.96
BRCA1-222ENST00000493919 PQLC2Q6ZP29 291 aa9.04□□□□□ -0.96
BRCA1-222ENST00000493919 SLC25A48Q6ZT89 311 aaKnown RBP9.04□□□□□ -0.96
BRCA1-222ENST00000493919 C15orf53Q8NAA6 179 aa9.04□□□□□ -0.96
BRCA1-222ENST00000493919 Q96M66 194 aa9.04□□□□□ -0.96
BRCA1-222ENST00000493919 AP5S1Q9NUS5 200 aa9.04□□□□□ -0.96
BRCA1-222ENST00000493919 RUSC1-AS1Q66K80 236 aa9.03□□□□□ -0.96
BRCA1-222ENST00000493919 Q6ZQT7 251 aa9.03□□□□□ -0.96
BRCA1-222ENST00000493919 ZNF714Q96N38 554 aa9.03□□□□□ -0.96
BRCA1-222ENST00000493919 AGPAT4-IT1Q9H0P7 198 aa9.03□□□□□ -0.96
BRCA1-222ENST00000493919 TMEM14DPA8MWL7 114 aa9.03□□□□□ -0.96
BRCA1-222ENST00000493919 M0R1W7 72 aa9.03□□□□□ -0.96
BRCA1-222ENST00000493919 Q8N7P7 452 aa9.03□□□□□ -0.96
BRCA1-222ENST00000493919 DSCAML1Q8TD84 2053 aa9.03□□□□□ -0.96
BRCA1-222ENST00000493919 CHEK1O14757 476 aa9.02□□□□□ -0.97
BRCA1-222ENST00000493919 FSHBP01225 129 aa9.02□□□□□ -0.97
BRCA1-222ENST00000493919 VPREB1P12018 145 aa9.02□□□□□ -0.97
BRCA1-222ENST00000493919 GP9P14770 177 aa9.02□□□□□ -0.97
BRCA1-222ENST00000493919 COX7A1P24310 79 aa9.02□□□□□ -0.97
BRCA1-222ENST00000493919 ZNF726P1Q15940 193 aa9.02□□□□□ -0.97
BRCA1-222ENST00000493919 VMA21Q3ZAQ7 101 aa9.02□□□□□ -0.97
BRCA1-222ENST00000493919 STPG3Q8N7X2 389 aa9.02□□□□□ -0.97
BRCA1-222ENST00000493919 CYYR1Q96J86 154 aa9.02□□□□□ -0.97
BRCA1-222ENST00000493919 ZNF286AQ9HBT8 521 aa9.02□□□□□ -0.97
BRCA1-222ENST00000493919 CACNG5Q9UF02 275 aa9.02□□□□□ -0.97
BRCA1-222ENST00000493919 KLK5Q9Y337 293 aaPredicted RBP9.02□□□□□ -0.97
BRCA1-222ENST00000493919 NDUFC2-KCTD14E9PQ53 114 aa9.01□□□□□ -0.97
BRCA1-222ENST00000493919 PDCD6O75340 191 aa9.01□□□□□ -0.97
BRCA1-222ENST00000493919 CD7P09564 240 aa9.01□□□□□ -0.97
BRCA1-222ENST00000493919 SCGB1C2P0DMR2 95 aa9.01□□□□□ -0.97
BRCA1-222ENST00000493919 QRFPP83859 136 aa9.01□□□□□ -0.97
BRCA1-222ENST00000493919 ASPHD1Q5U4P2 390 aa9.01□□□□□ -0.97
BRCA1-222ENST00000493919 AMN1Q8IY45 258 aa9.01□□□□□ -0.97
BRCA1-222ENST00000493919 BCL6BQ8N143 479 aaPredicted RBP9.01□□□□□ -0.97
BRCA1-222ENST00000493919 TMEM252Q8N6L7 170 aa9.01□□□□□ -0.97
BRCA1-222ENST00000493919 OR5C1Q8NGR4 320 aa9.01□□□□□ -0.97
BRCA1-222ENST00000493919 PIFOQ8TCI5 191 aa9.01□□□□□ -0.97
BRCA1-222ENST00000493919 NPIPB3Q92617 1050 aa9.01□□□□□ -0.97
BRCA1-222ENST00000493919 KIAA2026Q5HYC2 2103 aa9.01□□□□□ -0.97
BRCA1-222ENST00000493919 A0A0A6YYD4 124 aa9.01□□□□□ -0.97
BRCA1-222ENST00000493919 TMEM30CPA0ZSE6 113 aa9.01□□□□□ -0.97
BRCA1-222ENST00000493919 C6orf201Q7Z4U5 140 aa9.01□□□□□ -0.97
BRCA1-222ENST00000493919 MMD2Q8IY49 270 aa9.01□□□□□ -0.97
BRCA1-222ENST00000493919 TRAV2A0A0B4J234 112 aa9□□□□□ -0.97
BRCA1-222ENST00000493919 IGHV1-69DA0A0B4J2H0 117 aa9□□□□□ -0.97
BRCA1-222ENST00000493919 CRYM-AS1A6NIL9 109 aa9□□□□□ -0.97
BRCA1-222ENST00000493919 EPM2AB3EWF7 344 aa9□□□□□ -0.97
BRCA1-222ENST00000493919 IGHV1-69P01742 117 aa9□□□□□ -0.97
BRCA1-222ENST00000493919 GATA1P15976 413 aaPredicted RBP9□□□□□ -0.97
BRCA1-222ENST00000493919 ZC2HC1BQ5TFG8 222 aa9□□□□□ -0.97
BRCA1-222ENST00000493919 LAMTOR3Q9UHA4 124 aa9□□□□□ -0.97
BRCA1-222ENST00000493919 TRAV8-2A0A0B4J237 113 aa8.99□□□□□ -0.97
BRCA1-222ENST00000493919 NPIPB11E5RHQ5 1161 aa8.99□□□□□ -0.97
BRCA1-222ENST00000493919 IGHV1-8P0DP01 117 aa8.99□□□□□ -0.97
BRCA1-222ENST00000493919 DYNLT3P51808 116 aa8.99□□□□□ -0.97
BRCA1-222ENST00000493919 FXYD2P54710 66 aa8.99□□□□□ -0.97
BRCA1-222ENST00000493919 ZNF493Q6ZR52 646 aa8.99□□□□□ -0.97
BRCA1-222ENST00000493919 WFDC3Q8IUB2 231 aa8.99□□□□□ -0.97
BRCA1-222ENST00000493919 POM121L12Q8N7R1 296 aa8.99□□□□□ -0.97
BRCA1-222ENST00000493919 UBALD1Q8TB05 177 aa8.99□□□□□ -0.97
BRCA1-222ENST00000493919 FAM19A4Q96LR4 140 aa8.99□□□□□ -0.97
BRCA1-222ENST00000493919 SHANK2-AS3Q9BTD1 123 aa8.99□□□□□ -0.97
BRCA1-222ENST00000493919 PRR13Q9NZ81 148 aa8.99□□□□□ -0.97
BRCA1-222ENST00000493919 TIMM9Q9Y5J7 89 aa8.99□□□□□ -0.97
BRCA1-222ENST00000493919 FAM240AA0A1B0GVK7 77 aa8.99□□□□□ -0.97
BRCA1-222ENST00000493919 C17orf98A8MV24 154 aa8.99□□□□□ -0.97
BRCA1-222ENST00000493919 PRSS46E5RG02 174 aa8.99□□□□□ -0.97
BRCA1-222ENST00000493919 NDUFB4O95168 129 aa8.99□□□□□ -0.97
BRCA1-222ENST00000493919 ELANEP08246 267 aa8.99□□□□□ -0.97
BRCA1-222ENST00000493919 PYYP10082 97 aa8.99□□□□□ -0.97
BRCA1-222ENST00000493919 ZNF497Q6ZNH5 498 aa8.99□□□□□ -0.97
BRCA1-222ENST00000493919 C2orf48Q96LS8 159 aa8.99□□□□□ -0.97
BRCA1-222ENST00000493919 ODF3Q96PU9 254 aa8.99□□□□□ -0.97
BRCA1-222ENST00000493919 CALYQ9NYX4 217 aa8.99□□□□□ -0.97
BRCA1-222ENST00000493919 CTXND1A0A1B0GTU2 59 aa8.98□□□□□ -0.97
BRCA1-222ENST00000493919 APOHP02749 345 aaPredicted RBP8.98□□□□□ -0.97
BRCA1-222ENST00000493919 HLA-DRB4P13762 266 aa8.98□□□□□ -0.97
BRCA1-222ENST00000493919 SAA4P35542 130 aa8.98□□□□□ -0.97
BRCA1-222ENST00000493919 RTL8BQ17RB0 113 aa8.98□□□□□ -0.97
BRCA1-222ENST00000493919 RFESDQ8TAC1 157 aa8.98□□□□□ -0.97
BRCA1-222ENST00000493919 ARHGAP5-AS1Q96IT6 56 aa8.98□□□□□ -0.97
BRCA1-222ENST00000493919 LINC01600Q96MT4 127 aa8.98□□□□□ -0.97
BRCA1-222ENST00000493919 ZNF331Q9NQX6 463 aaPredicted RBP8.98□□□□□ -0.97
BRCA1-222ENST00000493919 NHP2Q9NX24 153 aaKnown RBP8.98□□□□□ -0.97
BRCA1-222ENST00000493919 HLA-DRB4X5D2U9 266 aa8.98□□□□□ -0.97
BRCA1-222ENST00000493919 ATRQ13535 2644 aa8.98□□□□□ -0.97
BRCA1-222ENST00000493919 TRAV8-4A0A0B4J246 113 aa8.97□□□□□ -0.97
BRCA1-222ENST00000493919 TRAV26-2A0A0B4J265 109 aa8.97□□□□□ -0.97
BRCA1-222ENST00000493919 UBE2E1P51965 193 aa8.97□□□□□ -0.97
BRCA1-222ENST00000493919 RPL30P62888 115 aaKnown RBP8.97□□□□□ -0.97
BRCA1-222ENST00000493919 DEFB112Q30KQ8 113 aa8.97□□□□□ -0.97
BRCA1-222ENST00000493919 C12orf74Q32Q52 190 aa8.97□□□□□ -0.97
BRCA1-222ENST00000493919 PIP4P2Q8N4L2 257 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms