RNA–Protein interactions for RNA: ENST00000492723.1

TOM1-216, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 2,568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-216ENST00000492723 RNASE4P34096 147 aaKnown RBP12.6□□□□□ -0.39
TOM1-216ENST00000492723 C18orf65Q6ZTR6 163 aa12.6□□□□□ -0.39
TOM1-216ENST00000492723 NCR2O95944 276 aa12.59□□□□□ -0.39
TOM1-216ENST00000492723 IFI27P40305 119 aaPredicted RBP12.59□□□□□ -0.39
TOM1-216ENST00000492723 DEFB136Q30KP8 78 aa12.59□□□□□ -0.39
TOM1-216ENST00000492723 DMRTA1Q5VZB9 504 aa12.59□□□□□ -0.39
TOM1-216ENST00000492723 FAM19A4Q96LR4 140 aa12.59□□□□□ -0.39
TOM1-216ENST00000492723 TIMM8BQ9Y5J9 83 aaPredicted RBP12.59□□□□□ -0.39
TOM1-216ENST00000492723 KIR3DS1Q14943 382 aa12.59□□□□□ -0.39
TOM1-216ENST00000492723 LINC00173Q6ZV60 143 aa12.59□□□□□ -0.39
TOM1-216ENST00000492723 RNF185Q96GF1 192 aa12.59□□□□□ -0.39
TOM1-216ENST00000492723 H3BVH4 76 aa12.58□□□□□ -0.4
TOM1-216ENST00000492723 ZNF688P0C7X2 276 aa12.58□□□□□ -0.4
TOM1-216ENST00000492723 RAB4AP20338 218 aa12.58□□□□□ -0.4
TOM1-216ENST00000492723 TMEM86BQ8N661 226 aa12.58□□□□□ -0.4
TOM1-216ENST00000492723 SIGLEC8Q9NYZ4 499 aa12.58□□□□□ -0.4
TOM1-216ENST00000492723 C2orf88Q9BSF0 95 aa12.58□□□□□ -0.4
TOM1-216ENST00000492723 TMEM70Q9BUB7 260 aa12.58□□□□□ -0.4
TOM1-216ENST00000492723 UNC79Q9P2D8 2635 aa12.57□□□□□ -0.4
TOM1-216ENST00000492723 OR5AL1P0C617 328 aa12.57□□□□□ -0.4
TOM1-216ENST00000492723 PSMG4Q5JS54 123 aa12.57□□□□□ -0.4
TOM1-216ENST00000492723 KHDC1LQ5JSQ8 128 aa12.57□□□□□ -0.4
TOM1-216ENST00000492723 ATOH7Q8N100 152 aa12.57□□□□□ -0.4
TOM1-216ENST00000492723 DNAJC9-AS1A6NH13 148 aa12.57□□□□□ -0.4
TOM1-216ENST00000492723 NPYP01303 97 aa12.57□□□□□ -0.4
TOM1-216ENST00000492723 SLURP1P55000 103 aa12.57□□□□□ -0.4
TOM1-216ENST00000492723 SPANXN1Q5VSR9 72 aa12.57□□□□□ -0.4
TOM1-216ENST00000492723 SNRPD3P62318 126 aaKnown RBP12.56□□□□□ -0.4
TOM1-216ENST00000492723 C20orf144Q9BQM9 153 aa12.56□□□□□ -0.4
TOM1-216ENST00000492723 TRBV7-9A0A0J9YWB2 115 aa12.56□□□□□ -0.4
TOM1-216ENST00000492723 SNAI2O43623 268 aa12.56□□□□□ -0.4
TOM1-216ENST00000492723 EVI2AP22794 236 aa12.56□□□□□ -0.4
TOM1-216ENST00000492723 WFDC12Q8WWY7 111 aa12.56□□□□□ -0.4
TOM1-216ENST00000492723 ANXA2RQ3ZCQ2 193 aa12.55□□□□□ -0.4
TOM1-216ENST00000492723 SMIM15Q7Z3B0 74 aa12.55□□□□□ -0.4
TOM1-216ENST00000492723 SPATA12Q7Z6I5 190 aa12.55□□□□□ -0.4
TOM1-216ENST00000492723 APRG1Q8IVJ8 170 aa12.55□□□□□ -0.4
TOM1-216ENST00000492723 ACANP16112 2415 aa12.55□□□□□ -0.4
TOM1-216ENST00000492723 K7EQG2 157 aa12.55□□□□□ -0.4
TOM1-216ENST00000492723 GAS8-AS1O95177 125 aa12.55□□□□□ -0.4
TOM1-216ENST00000492723 S100A4P26447 101 aaKnown RBP12.55□□□□□ -0.4
TOM1-216ENST00000492723 TCTEX1D4Q5JR98 221 aa12.55□□□□□ -0.4
TOM1-216ENST00000492723 Q6ZSV7 163 aa12.55□□□□□ -0.4
TOM1-216ENST00000492723 YAE1D1Q9NRH1 226 aa12.55□□□□□ -0.4
TOM1-216ENST00000492723 TCAPO15273 167 aa12.54□□□□□ -0.4
TOM1-216ENST00000492723 PPBPP02775 128 aa12.54□□□□□ -0.4
TOM1-216ENST00000492723 CACNG7P62955 275 aa12.54□□□□□ -0.4
TOM1-216ENST00000492723 KRTAP1-1Q07627 177 aa12.54□□□□□ -0.4
TOM1-216ENST00000492723 SPATA45Q537H7 98 aa12.54□□□□□ -0.4
TOM1-216ENST00000492723 DUX3Q96PT4 197 aa12.54□□□□□ -0.4
TOM1-216ENST00000492723 FOXC2Q99958 501 aa12.54□□□□□ -0.4
TOM1-216ENST00000492723 SYS1-DBNDD2H3BUS1 97 aa12.54□□□□□ -0.4
TOM1-216ENST00000492723 HIST2H2BDQ6DRA6 164 aa12.54□□□□□ -0.4
TOM1-216ENST00000492723 OR11H1Q8NG94 326 aa12.54□□□□□ -0.4
TOM1-216ENST00000492723 HSPB8Q9UJY1 196 aa12.54□□□□□ -0.4
TOM1-216ENST00000492723 IGHV4-4A0A075B6R2 117 aa12.53□□□□□ -0.4
TOM1-216ENST00000492723 LINC01619G3V211 115 aa12.53□□□□□ -0.4
TOM1-216ENST00000492723 TCF21O43680 179 aa12.53□□□□□ -0.4
TOM1-216ENST00000492723 ASIPP42127 132 aa12.53□□□□□ -0.4
TOM1-216ENST00000492723 DPF1Q92782 380 aa12.53□□□□□ -0.4
TOM1-216ENST00000492723 MAP1LC3CQ9BXW4 147 aa12.53□□□□□ -0.4
TOM1-216ENST00000492723 KLLNB2CW77 178 aa12.53□□□□□ -0.4
TOM1-216ENST00000492723 SPRY2O43597 315 aa12.53□□□□□ -0.4
TOM1-216ENST00000492723 ADAMTSL5Q6ZMM2 481 aa12.53□□□□□ -0.4
TOM1-216ENST00000492723 C4orf3Q8WVX3 66 aa12.53□□□□□ -0.4
TOM1-216ENST00000492723 ESM1Q9NQ30 184 aa12.53□□□□□ -0.4
TOM1-216ENST00000492723 AKAP9Q99996 3911 aa12.53□□□□□ -0.4
TOM1-216ENST00000492723 GCN1Q92616 2671 aaKnown RBP12.52□□□□□ -0.4
TOM1-216ENST00000492723 NF1P21359 2839 aa12.52□□□□□ -0.4
TOM1-216ENST00000492723 CRXO43186 299 aaPredicted RBP12.52□□□□□ -0.4
TOM1-216ENST00000492723 CD5LO43866 347 aa12.52□□□□□ -0.4
TOM1-216ENST00000492723 IGKV3-20P01619 116 aa12.52□□□□□ -0.4
TOM1-216ENST00000492723 MAJINQ3KP22 176 aa12.52□□□□□ -0.4
TOM1-216ENST00000492723 MAP1LC3AQ9H492 121 aa12.52□□□□□ -0.4
TOM1-216ENST00000492723 H0Y8G0 127 aa12.52□□□□□ -0.41
TOM1-216ENST00000492723 M0R381 172 aa12.52□□□□□ -0.41
TOM1-216ENST00000492723 GNRH2O43555 120 aa12.52□□□□□ -0.41
TOM1-216ENST00000492723 GATA1P15976 413 aaPredicted RBP12.52□□□□□ -0.41
TOM1-216ENST00000492723 ZNF705AQ6ZN79 300 aaPredicted RBP12.52□□□□□ -0.41
TOM1-216ENST00000492723 A0A0J9YX75 114 aa12.51□□□□□ -0.41
TOM1-216ENST00000492723 TNFRSF6BO95407 300 aa12.51□□□□□ -0.41
TOM1-216ENST00000492723 KLHL30-AS1Q8NEE0 82 aa12.51□□□□□ -0.41
TOM1-216ENST00000492723 OR1N2Q8NGR9 330 aa12.51□□□□□ -0.41
TOM1-216ENST00000492723 MIEN1Q9BRT3 115 aa12.51□□□□□ -0.41
TOM1-216ENST00000492723 FXYD7P58549 80 aa12.51□□□□□ -0.41
TOM1-216ENST00000492723 LAMTOR2Q9Y2Q5 125 aa12.51□□□□□ -0.41
TOM1-216ENST00000492723 PHLDA3Q9Y5J5 127 aa12.51□□□□□ -0.41
TOM1-216ENST00000492723 A0A096LNJ9 63 aa12.5□□□□□ -0.41
TOM1-216ENST00000492723 C20orf202A1L168 122 aa12.5□□□□□ -0.41
TOM1-216ENST00000492723 TRAV12-3A0A0B4J271 114 aa12.5□□□□□ -0.41
TOM1-216ENST00000492723 ZNF747Q9BV97 191 aa12.5□□□□□ -0.41
TOM1-216ENST00000492723 TRAV26-2A0A0B4J265 109 aa12.49□□□□□ -0.41
TOM1-216ENST00000492723 OR4C46A6NHA9 309 aa12.49□□□□□ -0.41
TOM1-216ENST00000492723 EREGO14944 169 aa12.49□□□□□ -0.41
TOM1-216ENST00000492723 G0S2P27469 103 aa12.49□□□□□ -0.41
TOM1-216ENST00000492723 MCRIP2Q9BUT9 160 aaKnown RBP12.49□□□□□ -0.41
TOM1-216ENST00000492723 CUBNO60494 3623 aa12.49□□□□□ -0.41
TOM1-216ENST00000492723 TRAV9-2A0A087WT02 112 aa12.49□□□□□ -0.41
TOM1-216ENST00000492723 LEPP41159 167 aa12.49□□□□□ -0.41
TOM1-216ENST00000492723 FAM159AQ6UWV7 190 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms