RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 IGKV2D-26A0A0A0MRZ7 120 aa11.71□□□□□ -0.54
TNFRSF1B-203ENST00000492361 IGHV2-70DA0A0C4DH43 119 aa11.71□□□□□ -0.54
TNFRSF1B-203ENST00000492361 MS4A6AQ9H2W1 248 aa11.71□□□□□ -0.54
TNFRSF1B-203ENST00000492361 A0A096LNJ9 63 aa11.71□□□□□ -0.54
TNFRSF1B-203ENST00000492361 MEGF9Q9H1U4 602 aa11.71□□□□□ -0.54
TNFRSF1B-203ENST00000492361 A0A0G2JLM5 398 aa11.7□□□□□ -0.54
TNFRSF1B-203ENST00000492361 A0A1B0GW15 77 aa11.7□□□□□ -0.54
TNFRSF1B-203ENST00000492361 SMAD7O15105 426 aaKnown RBP11.7□□□□□ -0.54
TNFRSF1B-203ENST00000492361 Q6ZS46 218 aa11.7□□□□□ -0.54
TNFRSF1B-203ENST00000492361 RPL39LQ96EH5 51 aaKnown RBP11.7□□□□□ -0.54
TNFRSF1B-203ENST00000492361 COL25A1Q9BXS0 654 aaPredicted RBP11.7□□□□□ -0.54
TNFRSF1B-203ENST00000492361 ZNF256Q9Y2P7 627 aaPredicted RBP11.7□□□□□ -0.54
TNFRSF1B-203ENST00000492361 ZNF688P0C7X2 276 aa11.7□□□□□ -0.54
TNFRSF1B-203ENST00000492361 DEFB125Q8N687 156 aa11.7□□□□□ -0.54
TNFRSF1B-203ENST00000492361 CENPVL3A0A0U1RRI6 287 aa11.69□□□□□ -0.54
TNFRSF1B-203ENST00000492361 UBE2E1P51965 193 aa11.69□□□□□ -0.54
TNFRSF1B-203ENST00000492361 SCGB3A1Q96QR1 104 aa11.69□□□□□ -0.54
TNFRSF1B-203ENST00000492361 IGHV3-64A0A075B6Q5 118 aa11.69□□□□□ -0.54
TNFRSF1B-203ENST00000492361 TRAV12-2A0A075B6T6 113 aa11.69□□□□□ -0.54
TNFRSF1B-203ENST00000492361 ODF3BA8MYP8 253 aa11.69□□□□□ -0.54
TNFRSF1B-203ENST00000492361 IGKCP01834 107 aa11.69□□□□□ -0.54
TNFRSF1B-203ENST00000492361 EDN2P20800 178 aa11.69□□□□□ -0.54
TNFRSF1B-203ENST00000492361 FAM110DQ8TAY7 271 aaPredicted RBP11.69□□□□□ -0.54
TNFRSF1B-203ENST00000492361 IGHV4-61A0A0C4DH41 118 aa11.69□□□□□ -0.54
TNFRSF1B-203ENST00000492361 MINOS1Q5TGZ0 78 aa11.69□□□□□ -0.54
TNFRSF1B-203ENST00000492361 MRPL52Q86TS9 123 aaKnown RBP11.69□□□□□ -0.54
TNFRSF1B-203ENST00000492361 MINOS1-NBL1R4GNA1 71 aa11.69□□□□□ -0.54
TNFRSF1B-203ENST00000492361 CFAP46Q8IYW2 2715 aa11.68□□□□□ -0.54
TNFRSF1B-203ENST00000492361 TRAV12-3A0A0B4J271 114 aa11.68□□□□□ -0.54
TNFRSF1B-203ENST00000492361 GTF2H5Q6ZYL4 71 aa11.68□□□□□ -0.54
TNFRSF1B-203ENST00000492361 SRSF8Q9BRL6 282 aaKnown RBP11.68□□□□□ -0.54
TNFRSF1B-203ENST00000492361 JPT2Q9H910 190 aa11.68□□□□□ -0.54
TNFRSF1B-203ENST00000492361 IGHV3-73A0A0B4J1V6 119 aa11.68□□□□□ -0.54
TNFRSF1B-203ENST00000492361 H7C2G1 150 aa11.68□□□□□ -0.54
TNFRSF1B-203ENST00000492361 CD5LO43866 347 aa11.68□□□□□ -0.54
TNFRSF1B-203ENST00000492361 SFTPCP11686 197 aa11.68□□□□□ -0.54
TNFRSF1B-203ENST00000492361 CD300EQ496F6 205 aaPredicted RBP11.68□□□□□ -0.54
TNFRSF1B-203ENST00000492361 C2orf91Q6ZV80 131 aa11.68□□□□□ -0.54
TNFRSF1B-203ENST00000492361 IGHG4P01861 327 aa11.67□□□□□ -0.54
TNFRSF1B-203ENST00000492361 SRSF9Q13242 221 aaKnown RBP eCLIP11.67□□□□□ -0.54
TNFRSF1B-203ENST00000492361 AMTNQ6UX39 209 aa11.67□□□□□ -0.54
TNFRSF1B-203ENST00000492361 CCL19Q99731 98 aa11.67□□□□□ -0.54
TNFRSF1B-203ENST00000492361 CYSLTR1Q9Y271 337 aa11.67□□□□□ -0.54
TNFRSF1B-203ENST00000492361 OR4X2Q8NGF9 303 aa11.67□□□□□ -0.54
TNFRSF1B-203ENST00000492361 DOPEY1Q5JWR5 2465 aa11.67□□□□□ -0.54
TNFRSF1B-203ENST00000492361 ANXA2RQ3ZCQ2 193 aa11.67□□□□□ -0.54
TNFRSF1B-203ENST00000492361 CLEC2AQ6UVW9 174 aa11.67□□□□□ -0.54
TNFRSF1B-203ENST00000492361 C11orf44Q8N8P7 122 aa11.67□□□□□ -0.54
TNFRSF1B-203ENST00000492361 SIRPDQ9H106 197 aa11.67□□□□□ -0.54
TNFRSF1B-203ENST00000492361 CD7P09564 240 aa11.66□□□□□ -0.54
TNFRSF1B-203ENST00000492361 FABP2P12104 132 aa11.66□□□□□ -0.54
TNFRSF1B-203ENST00000492361 FXYD2P54710 66 aa11.66□□□□□ -0.54
TNFRSF1B-203ENST00000492361 UCNP55089 124 aa11.66□□□□□ -0.54
TNFRSF1B-203ENST00000492361 SLC50A1Q9BRV3 221 aa11.66□□□□□ -0.54
TNFRSF1B-203ENST00000492361 DPM2O94777 84 aa11.66□□□□□ -0.54
TNFRSF1B-203ENST00000492361 OCIAD2Q56VL3 154 aa11.66□□□□□ -0.54
TNFRSF1B-203ENST00000492361 PRR9Q5T870 116 aa11.66□□□□□ -0.54
TNFRSF1B-203ENST00000492361 C10orf99Q6UWK7 81 aa11.66□□□□□ -0.54
TNFRSF1B-203ENST00000492361 RHPN1-AS1Q9BWJ2 59 aa11.66□□□□□ -0.54
TNFRSF1B-203ENST00000492361 CELSR2Q9HCU4 2923 aa11.66□□□□□ -0.54
TNFRSF1B-203ENST00000492361 CRXO43186 299 aaPredicted RBP11.66□□□□□ -0.54
TNFRSF1B-203ENST00000492361 NXT2Q9NPJ8 142 aaKnown RBP11.66□□□□□ -0.54
TNFRSF1B-203ENST00000492361 IGHV4-39P01824 125 aa11.65□□□□□ -0.54
TNFRSF1B-203ENST00000492361 SMIM13P0DJ93 91 aa11.65□□□□□ -0.54
TNFRSF1B-203ENST00000492361 C20orf173Q96LM9 149 aa11.65□□□□□ -0.54
TNFRSF1B-203ENST00000492361 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.65□□□□□ -0.54
TNFRSF1B-203ENST00000492361 LAGE3Q14657 143 aa11.65□□□□□ -0.54
TNFRSF1B-203ENST00000492361 RNF185Q96GF1 192 aa11.65□□□□□ -0.54
TNFRSF1B-203ENST00000492361 LOC107984156A0A0G2JMH3 177 aa11.64□□□□□ -0.55
TNFRSF1B-203ENST00000492361 APOMO95445 188 aa11.64□□□□□ -0.55
TNFRSF1B-203ENST00000492361 ASIPP42127 132 aa11.64□□□□□ -0.55
TNFRSF1B-203ENST00000492361 LMO4P61968 165 aa11.64□□□□□ -0.55
TNFRSF1B-203ENST00000492361 ARL17AQ8IVW1 177 aa11.64□□□□□ -0.55
TNFRSF1B-203ENST00000492361 CHAC1Q9BUX1 264 aa11.64□□□□□ -0.55
TNFRSF1B-203ENST00000492361 NPFFR1Q9GZQ6 430 aa11.64□□□□□ -0.55
TNFRSF1B-203ENST00000492361 K7ERU9 68 aa11.64□□□□□ -0.55
TNFRSF1B-203ENST00000492361 LGALS9BQ3B8N2 356 aa11.64□□□□□ -0.55
TNFRSF1B-203ENST00000492361 LGALS9CQ6DKI2 356 aa11.64□□□□□ -0.55
TNFRSF1B-203ENST00000492361 MOB4Q9Y3A3 225 aa11.64□□□□□ -0.55
TNFRSF1B-203ENST00000492361 PSMG4Q5JS54 123 aa11.64□□□□□ -0.55
TNFRSF1B-203ENST00000492361 HSD52Q0P140 79 aa11.63□□□□□ -0.55
TNFRSF1B-203ENST00000492361 SAMD5Q5TGI4 173 aa11.63□□□□□ -0.55
TNFRSF1B-203ENST00000492361 C11orf71Q6IPW1 123 aa11.63□□□□□ -0.55
TNFRSF1B-203ENST00000492361 TMEM170BQ5T4T1 132 aa11.63□□□□□ -0.55
TNFRSF1B-203ENST00000492361 FAM159AQ6UWV7 190 aa11.63□□□□□ -0.55
TNFRSF1B-203ENST00000492361 ZFAND3Q9H8U3 227 aa11.63□□□□□ -0.55
TNFRSF1B-203ENST00000492361 KLK9Q9UKQ9 250 aa11.63□□□□□ -0.55
TNFRSF1B-203ENST00000492361 ZNF56Q15929 161 aa11.63□□□□□ -0.55
TNFRSF1B-203ENST00000492361 PPBPP02775 128 aa11.62□□□□□ -0.55
TNFRSF1B-203ENST00000492361 TRAV8-2A0A0B4J237 113 aa11.62□□□□□ -0.55
TNFRSF1B-203ENST00000492361 OR11H12B2RN74 326 aa11.62□□□□□ -0.55
TNFRSF1B-203ENST00000492361 IGLC6P0CF74 106 aa11.62□□□□□ -0.55
TNFRSF1B-203ENST00000492361 C5orf56Q8N8D9 126 aa11.62□□□□□ -0.55
TNFRSF1B-203ENST00000492361 OR11H1Q8NG94 326 aa11.62□□□□□ -0.55
TNFRSF1B-203ENST00000492361 OR11H2Q8NH07 326 aa11.62□□□□□ -0.55
TNFRSF1B-203ENST00000492361 PIMREGQ9BSJ6 248 aa11.62□□□□□ -0.55
TNFRSF1B-203ENST00000492361 IGHV4-30-2A0A087WSY4 118 aa11.62□□□□□ -0.55
TNFRSF1B-203ENST00000492361 CLPSL1A2RUU4 121 aa11.62□□□□□ -0.55
TNFRSF1B-203ENST00000492361 DUX3Q96PT4 197 aa11.62□□□□□ -0.55
TNFRSF1B-203ENST00000492361 CSTL1Q9H114 145 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 198.2 ms