RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 GOSR2O14653 212 aa8.85□□□□□ -0.99
USF1-206ENST00000491629 FAUP35544 74 aaKnown RBP8.85□□□□□ -0.99
USF1-206ENST00000491629 MRPL23Q16540 153 aaKnown RBP8.85□□□□□ -0.99
USF1-206ENST00000491629 S100A7AQ86SG5 101 aa8.85□□□□□ -0.99
USF1-206ENST00000491629 UQCC1Q9NVA1 299 aa8.85□□□□□ -0.99
USF1-206ENST00000491629 TRAV9-2A0A087WT02 112 aa8.84□□□□□ -0.99
USF1-206ENST00000491629 E5RGE8 158 aa8.84□□□□□ -0.99
USF1-206ENST00000491629 TSTD3H0UI37 97 aa8.84□□□□□ -0.99
USF1-206ENST00000491629 COX7A2P2O60397 106 aa8.84□□□□□ -0.99
USF1-206ENST00000491629 NDUFB4O95168 129 aa8.84□□□□□ -0.99
USF1-206ENST00000491629 RNASE4P34096 147 aaKnown RBP8.84□□□□□ -0.99
USF1-206ENST00000491629 EIF5AP63241 154 aaKnown RBP8.84□□□□□ -0.99
USF1-206ENST00000491629 IBA57Q5T440 356 aaKnown RBP8.84□□□□□ -0.99
USF1-206ENST00000491629 C10orf113Q5VZT2 155 aa8.84□□□□□ -0.99
USF1-206ENST00000491629 ZNF546Q86UE3 836 aa8.84□□□□□ -0.99
USF1-206ENST00000491629 ZFP82Q8N141 532 aa8.84□□□□□ -0.99
USF1-206ENST00000491629 ZFAND2AQ8N6M9 145 aa8.84□□□□□ -0.99
USF1-206ENST00000491629 MRPL32Q9BYC8 188 aaKnown RBP8.84□□□□□ -0.99
USF1-206ENST00000491629 TNFSF18Q9UNG2 199 aa8.84□□□□□ -0.99
USF1-206ENST00000491629 RCL1Q9Y2P8 373 aaKnown RBP8.84□□□□□ -0.99
USF1-206ENST00000491629 MPDU1O75352 247 aa8.83□□□□□ -1
USF1-206ENST00000491629 CRYGDP07320 174 aa8.83□□□□□ -1
USF1-206ENST00000491629 OR4E1P0C645 316 aa8.83□□□□□ -1
USF1-206ENST00000491629 SFTA3P0C7M3 94 aa8.83□□□□□ -1
USF1-206ENST00000491629 CRISP2P16562 243 aa8.83□□□□□ -1
USF1-206ENST00000491629 S100A2P29034 98 aa8.83□□□□□ -1
USF1-206ENST00000491629 DDTP30046 118 aa8.83□□□□□ -1
USF1-206ENST00000491629 NHLH2Q02577 135 aa8.83□□□□□ -1
USF1-206ENST00000491629 COTL1Q14019 142 aa8.83□□□□□ -1
USF1-206ENST00000491629 MRPL52Q86TS9 123 aaKnown RBP8.83□□□□□ -1
USF1-206ENST00000491629 OR10P1Q8NGE3 313 aa8.83□□□□□ -1
USF1-206ENST00000491629 ZNF479Q96JC4 524 aa8.83□□□□□ -1
USF1-206ENST00000491629 SLC25A21Q9BQT8 299 aaPredicted RBP8.83□□□□□ -1
USF1-206ENST00000491629 RNF24Q9Y225 148 aa8.83□□□□□ -1
USF1-206ENST00000491629 PKHD1L1Q86WI1 4243 aa8.82□□□□□ -1
USF1-206ENST00000491629 TRBV19A0A075B6N1 114 aa8.82□□□□□ -1
USF1-206ENST00000491629 K7EP13 123 aa8.82□□□□□ -1
USF1-206ENST00000491629 ZNF253O75346 499 aa8.82□□□□□ -1
USF1-206ENST00000491629 LINC00614P0C842 121 aa8.82□□□□□ -1
USF1-206ENST00000491629 EVI2AP22794 236 aa8.82□□□□□ -1
USF1-206ENST00000491629 PCP4P48539 62 aa8.82□□□□□ -1
USF1-206ENST00000491629 KRTAP10-4P60372 401 aaPredicted RBP8.82□□□□□ -1
USF1-206ENST00000491629 GAGE1Q13065 139 aa8.82□□□□□ -1
USF1-206ENST00000491629 GUK1Q16774 197 aa8.82□□□□□ -1
USF1-206ENST00000491629 MIC13Q5XKP0 118 aa8.82□□□□□ -1
USF1-206ENST00000491629 NTN5Q8WTR8 489 aaPredicted RBP8.82□□□□□ -1
USF1-206ENST00000491629 MRPL53Q96EL3 112 aaKnown RBP8.82□□□□□ -1
USF1-206ENST00000491629 DNAJC4Q9NNZ3 241 aa8.82□□□□□ -1
USF1-206ENST00000491629 FLVCR2Q9UPI3 526 aa8.82□□□□□ -1
USF1-206ENST00000491629 IGHV1OR15-1A0A075B7D0 117 aa8.81□□□□□ -1
USF1-206ENST00000491629 GYPEP15421 78 aa8.81□□□□□ -1
USF1-206ENST00000491629 RAB5AP20339 215 aa8.81□□□□□ -1
USF1-206ENST00000491629 SRIP30626 198 aa8.81□□□□□ -1
USF1-206ENST00000491629 PPT1P50897 306 aa8.81□□□□□ -1
USF1-206ENST00000491629 H2BFSP57053 126 aa8.81□□□□□ -1
USF1-206ENST00000491629 SLAQ13239 276 aa8.81□□□□□ -1
USF1-206ENST00000491629 WFDC2Q14508 124 aa8.81□□□□□ -1
USF1-206ENST00000491629 C9orf47Q6ZRZ4 202 aa8.81□□□□□ -1
USF1-206ENST00000491629 Q6ZSA8 131 aa8.81□□□□□ -1
USF1-206ENST00000491629 LINC00528Q8N1L1 170 aa8.81□□□□□ -1
USF1-206ENST00000491629 Q8N814 137 aa8.81□□□□□ -1
USF1-206ENST00000491629 LINC00477Q96M19 166 aa8.81□□□□□ -1
USF1-206ENST00000491629 IGKV2-40A0A087WW87 121 aaPredicted RBP8.8□□□□□ -1
USF1-206ENST00000491629 LOC100131303A0A0U1RQF7 123 aa8.8□□□□□ -1
USF1-206ENST00000491629 IGKV2D-40P01614 121 aaPredicted RBP8.8□□□□□ -1
USF1-206ENST00000491629 GPX1P07203 203 aa8.8□□□□□ -1
USF1-206ENST00000491629 TPT1P13693 172 aaKnown RBP8.8□□□□□ -1
USF1-206ENST00000491629 CAV2P51636 162 aa8.8□□□□□ -1
USF1-206ENST00000491629 TAS2R30P59541 319 aa8.8□□□□□ -1
USF1-206ENST00000491629 UBE2MP61081 183 aaKnown RBP8.8□□□□□ -1
USF1-206ENST00000491629 PYY3Q5JQD4 70 aa8.8□□□□□ -1
USF1-206ENST00000491629 EXOC3-AS1Q8N2X6 119 aa8.8□□□□□ -1
USF1-206ENST00000491629 TRGV4A0A0C4DH28 118 aa8.79□□□□□ -1
USF1-206ENST00000491629 SCGB1D2O95969 90 aa8.79□□□□□ -1
USF1-206ENST00000491629 MBP02144 154 aa8.79□□□□□ -1
USF1-206ENST00000491629 MBPP02686 304 aaPredicted RBP8.79□□□□□ -1
USF1-206ENST00000491629 PYYP10082 97 aa8.79□□□□□ -1
USF1-206ENST00000491629 CAMLGP49069 296 aa8.79□□□□□ -1
USF1-206ENST00000491629 SAPCD1Q5SSQ6 148 aa8.79□□□□□ -1
USF1-206ENST00000491629 OR10G4Q8NGN3 311 aa8.79□□□□□ -1
USF1-206ENST00000491629 TREM1Q9NP99 234 aa8.79□□□□□ -1
USF1-206ENST00000491629 IBA57-AS1B1ANH7 110 aa8.78□□□□□ -1
USF1-206ENST00000491629 PLA2G1BP04054 148 aaKnown RBP8.78□□□□□ -1
USF1-206ENST00000491629 ZNF415Q09FC8 603 aa8.78□□□□□ -1
USF1-206ENST00000491629 RHEBQ15382 184 aa8.78□□□□□ -1
USF1-206ENST00000491629 IAH1Q2TAA2 248 aaPredicted RBP8.78□□□□□ -1
USF1-206ENST00000491629 SERTAD4-AS1Q5TG53 156 aa8.78□□□□□ -1
USF1-206ENST00000491629 EIF5AL1Q6IS14 154 aaKnown RBP8.78□□□□□ -1
USF1-206ENST00000491629 C10orf126Q8N4M7 172 aa8.78□□□□□ -1
USF1-206ENST00000491629 DEFB104AQ8WTQ1 72 aa8.78□□□□□ -1
USF1-206ENST00000491629 ZNF471Q9BX82 626 aaPredicted RBP8.78□□□□□ -1
USF1-206ENST00000491629 TMEM238LA0A1B0GVL6 79 aa8.77□□□□□ -1.01
USF1-206ENST00000491629 PSCAO43653 123 aa8.77□□□□□ -1.01
USF1-206ENST00000491629 HIST1H1EP10412 219 aaKnown RBP8.77□□□□□ -1.01
USF1-206ENST00000491629 RASL10AQ92737 203 aa8.77□□□□□ -1.01
USF1-206ENST00000491629 C11orf1Q9H5F2 150 aa8.77□□□□□ -1.01
USF1-206ENST00000491629 TMEM14CQ9P0S9 112 aa8.77□□□□□ -1.01
USF1-206ENST00000491629 ZNF492Q9P255 531 aa8.77□□□□□ -1.01
USF1-206ENST00000491629 WDR83OSQ9Y284 106 aa8.77□□□□□ -1.01
USF1-206ENST00000491629 IGHV3-38A0A0C4DH36 116 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms