RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 KHDC3LQ587J8 217 aa6.02□□□□□ -1.45
HDAC3-211ENST00000491581 FAM159AQ6UWV7 190 aa6.02□□□□□ -1.45
HDAC3-211ENST00000491581 OR10G4Q8NGN3 311 aa6.02□□□□□ -1.45
HDAC3-211ENST00000491581 OR10G9Q8NGN4 311 aa6.02□□□□□ -1.45
HDAC3-211ENST00000491581 OR10G7Q8NGN6 311 aa6.02□□□□□ -1.45
HDAC3-211ENST00000491581 LINC00479Q96M42 142 aa6.02□□□□□ -1.45
HDAC3-211ENST00000491581 RBAKDNA6NC62 111 aa6.01□□□□□ -1.45
HDAC3-211ENST00000491581 IFNA5P01569 189 aa6.01□□□□□ -1.45
HDAC3-211ENST00000491581 IGLV2-11P01706 119 aa6.01□□□□□ -1.45
HDAC3-211ENST00000491581 SMR3BP02814 79 aaPredicted RBP6.01□□□□□ -1.45
HDAC3-211ENST00000491581 CYCSP99999 105 aaKnown RBP6.01□□□□□ -1.45
HDAC3-211ENST00000491581 LINC00299Q6ZSB3 139 aa6.01□□□□□ -1.45
HDAC3-211ENST00000491581 Q6ZSN1 163 aa6.01□□□□□ -1.45
HDAC3-211ENST00000491581 NEGR1Q7Z3B1 354 aa6.01□□□□□ -1.45
HDAC3-211ENST00000491581 KRTAP4-12Q9BQ66 201 aa6.01□□□□□ -1.45
HDAC3-211ENST00000491581 TREM1Q9NP99 234 aa6.01□□□□□ -1.45
HDAC3-211ENST00000491581 OTORQ9NRC9 128 aa6.01□□□□□ -1.45
HDAC3-211ENST00000491581 A0A087WTM6 91 aa6□□□□□ -1.45
HDAC3-211ENST00000491581 TRAV34A0A0B4J273 112 aa6□□□□□ -1.45
HDAC3-211ENST00000491581 A0A1W2PPQ1 181 aa6□□□□□ -1.45
HDAC3-211ENST00000491581 PGPEP1LA6NFU8 196 aa6□□□□□ -1.45
HDAC3-211ENST00000491581 GGTLC3B5MD39 225 aa6□□□□□ -1.45
HDAC3-211ENST00000491581 BTF3P20290 206 aaKnown RBP6□□□□□ -1.45
HDAC3-211ENST00000491581 ATP6V0CP27449 155 aa6□□□□□ -1.45
HDAC3-211ENST00000491581 SRIP30626 198 aa6□□□□□ -1.45
HDAC3-211ENST00000491581 ZNF726P1Q15940 193 aa6□□□□□ -1.45
HDAC3-211ENST00000491581 MRPL23Q16540 153 aaKnown RBP6□□□□□ -1.45
HDAC3-211ENST00000491581 OR4C5Q8NGB2 326 aa6□□□□□ -1.45
HDAC3-211ENST00000491581 CMTM2Q8TAZ6 248 aa6□□□□□ -1.45
HDAC3-211ENST00000491581 RASL10AQ92737 203 aa6□□□□□ -1.45
HDAC3-211ENST00000491581 RAB24Q969Q5 203 aa6□□□□□ -1.45
HDAC3-211ENST00000491581 JPT2Q9H910 190 aa6□□□□□ -1.45
HDAC3-211ENST00000491581 KCNIP2Q9NS61 270 aa6□□□□□ -1.45
HDAC3-211ENST00000491581 FAT1Q14517 4588 aa5.99□□□□□ -1.45
HDAC3-211ENST00000491581 A0A1W2PPV4 95 aa5.99□□□□□ -1.45
HDAC3-211ENST00000491581 IGHV3-30P01768 117 aa5.99□□□□□ -1.45
HDAC3-211ENST00000491581 IGHV3-33P01772 117 aa5.99□□□□□ -1.45
HDAC3-211ENST00000491581 IGHV3-30-3P0DP02 117 aa5.99□□□□□ -1.45
HDAC3-211ENST00000491581 IGHV3-30-5P0DP03 117 aa5.99□□□□□ -1.45
HDAC3-211ENST00000491581 GCHFRP30047 84 aa5.99□□□□□ -1.45
HDAC3-211ENST00000491581 CDC34P49427 236 aaPredicted RBP5.99□□□□□ -1.45
HDAC3-211ENST00000491581 TAS2R45P59539 299 aa5.99□□□□□ -1.45
HDAC3-211ENST00000491581 WFDC2Q14508 124 aa5.99□□□□□ -1.45
HDAC3-211ENST00000491581 ACOT6Q3I5F7 207 aaPredicted RBP5.99□□□□□ -1.45
HDAC3-211ENST00000491581 C4orf48Q5BLP8 95 aa5.99□□□□□ -1.45
HDAC3-211ENST00000491581 PRNTQ86SH4 94 aa5.99□□□□□ -1.45
HDAC3-211ENST00000491581 LYPD1Q8N2G4 141 aa5.99□□□□□ -1.45
HDAC3-211ENST00000491581 SLC25A29Q8N8R3 303 aa5.99□□□□□ -1.45
HDAC3-211ENST00000491581 NHLRC2Q8NBF2 726 aa5.99□□□□□ -1.45
HDAC3-211ENST00000491581 DNAJC30Q96LL9 226 aa5.99□□□□□ -1.45
HDAC3-211ENST00000491581 Q9HAA7 133 aa5.99□□□□□ -1.45
HDAC3-211ENST00000491581 LY96Q9Y6Y9 160 aa5.99□□□□□ -1.45
HDAC3-211ENST00000491581 TRGV11A0A075B6L2 103 aa5.98□□□□□ -1.45
HDAC3-211ENST00000491581 TRAV4A0A0B4J268 109 aa5.98□□□□□ -1.45
HDAC3-211ENST00000491581 TRAV21A0A0B4J279 112 aa5.98□□□□□ -1.45
HDAC3-211ENST00000491581 TRBV7-9A0A0J9YWB2 115 aa5.98□□□□□ -1.45
HDAC3-211ENST00000491581 RNF222A6NCQ9 220 aa5.98□□□□□ -1.45
HDAC3-211ENST00000491581 M0R2P5 195 aa5.98□□□□□ -1.45
HDAC3-211ENST00000491581 GCGP01275 180 aa5.98□□□□□ -1.45
HDAC3-211ENST00000491581 TCRAP04437 139 aa5.98□□□□□ -1.45
HDAC3-211ENST00000491581 STAG3L2P0CL84 134 aa5.98□□□□□ -1.45
HDAC3-211ENST00000491581 STAG3L3P0CL85 134 aa5.98□□□□□ -1.45
HDAC3-211ENST00000491581 RNASE3P12724 160 aaKnown RBP5.98□□□□□ -1.45
HDAC3-211ENST00000491581 GATA1P15976 413 aaPredicted RBP5.98□□□□□ -1.45
HDAC3-211ENST00000491581 FGF8P55075 233 aaPredicted RBP5.98□□□□□ -1.45
HDAC3-211ENST00000491581 UBE2G2P60604 165 aa5.98□□□□□ -1.45
HDAC3-211ENST00000491581 SUMO1P63165 101 aaKnown RBP5.98□□□□□ -1.45
HDAC3-211ENST00000491581 TDRG1Q3Y452 100 aa5.98□□□□□ -1.45
HDAC3-211ENST00000491581 CFAP126Q5VTH2 177 aa5.98□□□□□ -1.45
HDAC3-211ENST00000491581 RPL7L1Q6DKI1 246 aaKnown RBP5.98□□□□□ -1.45
HDAC3-211ENST00000491581 IQCF2Q8IXL9 164 aa5.98□□□□□ -1.45
HDAC3-211ENST00000491581 ASB13Q8WXK3 278 aa5.98□□□□□ -1.45
HDAC3-211ENST00000491581 MSRB1Q9NZV6 116 aa5.98□□□□□ -1.45
HDAC3-211ENST00000491581 PSG8Q9UQ74 426 aa5.98□□□□□ -1.45
HDAC3-211ENST00000491581 IGKV3D-20A0A0C4DH25 116 aa5.97□□□□□ -1.45
HDAC3-211ENST00000491581 G3V3Q6 166 aa5.97□□□□□ -1.45
HDAC3-211ENST00000491581 SMLR1H3BR10 107 aa5.97□□□□□ -1.45
HDAC3-211ENST00000491581 CRYGDP07320 174 aa5.97□□□□□ -1.45
HDAC3-211ENST00000491581 PET100P0DJ07 73 aa5.97□□□□□ -1.45
HDAC3-211ENST00000491581 DEFA1P59665 94 aa5.97□□□□□ -1.45
HDAC3-211ENST00000491581 DEFA3P59666 94 aa5.97□□□□□ -1.45
HDAC3-211ENST00000491581 ERVFC1-1P60608 527 aa5.97□□□□□ -1.45
HDAC3-211ENST00000491581 ZNF876PQ49A33 203 aa5.97□□□□□ -1.45
HDAC3-211ENST00000491581 ZNF506Q5JVG8 444 aa5.97□□□□□ -1.45
HDAC3-211ENST00000491581 PQLC2Q6ZP29 291 aa5.97□□□□□ -1.45
HDAC3-211ENST00000491581 PCNPQ8WW12 178 aaKnown RBP5.97□□□□□ -1.45
HDAC3-211ENST00000491581 SPXQ9BT56 116 aa5.97□□□□□ -1.45
HDAC3-211ENST00000491581 SAMD10Q9BYL1 202 aa5.97□□□□□ -1.45
HDAC3-211ENST00000491581 SDF2L1Q9HCN8 221 aa5.97□□□□□ -1.45
HDAC3-211ENST00000491581 LENEPQ9Y5L5 61 aa5.97□□□□□ -1.45
HDAC3-211ENST00000491581 LRCOL1A6NCL2 159 aa5.96□□□□□ -1.46
HDAC3-211ENST00000491581 LECT2O14960 151 aa5.96□□□□□ -1.46
HDAC3-211ENST00000491581 RS1O15537 224 aa5.96□□□□□ -1.46
HDAC3-211ENST00000491581 LINC01620Q4KN68 170 aa5.96□□□□□ -1.46
HDAC3-211ENST00000491581 TMED6Q8WW62 240 aa5.96□□□□□ -1.46
HDAC3-211ENST00000491581 C9orf85Q96MD7 179 aa5.96□□□□□ -1.46
HDAC3-211ENST00000491581 AQP10Q96PS8 301 aa5.96□□□□□ -1.46
HDAC3-211ENST00000491581 FAM30AQ9NZY2 134 aa5.96□□□□□ -1.46
HDAC3-211ENST00000491581 EPDR1Q9UM22 224 aa5.96□□□□□ -1.46
HDAC3-211ENST00000491581 GRIFINA4D1Z8 144 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms