RNA–Protein interactions for RNA: ENST00000491467.1

SRGAP3-210, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-210ENST00000491467 ZNF738Q8NE65 137 aa9.04□□□□□ -0.96
SRGAP3-210ENST00000491467 WFDC12Q8WWY7 111 aa9.04□□□□□ -0.96
SRGAP3-210ENST00000491467 IGHV3-49A0A0A0MS15 119 aa9.03□□□□□ -0.96
SRGAP3-210ENST00000491467 HOXA3O43365 443 aaPredicted RBP9.03□□□□□ -0.96
SRGAP3-210ENST00000491467 ZNF80P51504 273 aaPredicted RBP9.03□□□□□ -0.96
SRGAP3-210ENST00000491467 NIT1Q86X76 327 aa9.03□□□□□ -0.96
SRGAP3-210ENST00000491467 Q8TAT8 98 aa9.03□□□□□ -0.96
SRGAP3-210ENST00000491467 PPBPP02775 128 aa9.02□□□□□ -0.97
SRGAP3-210ENST00000491467 LINC00614P0C842 121 aa9.02□□□□□ -0.97
SRGAP3-210ENST00000491467 FAM104BQ5XKR9 115 aa9.02□□□□□ -0.97
SRGAP3-210ENST00000491467 Q6ZWC4 215 aa9.02□□□□□ -0.97
SRGAP3-210ENST00000491467 RCHY1Q96PM5 261 aa9.02□□□□□ -0.97
SRGAP3-210ENST00000491467 TMEM191AQ9H0A3 160 aa9.02□□□□□ -0.97
SRGAP3-210ENST00000491467 U3KQK5 164 aa9.02□□□□□ -0.97
SRGAP3-210ENST00000491467 CACNG7P62955 275 aa9.01□□□□□ -0.97
SRGAP3-210ENST00000491467 TM4SF20Q53R12 229 aa9.01□□□□□ -0.97
SRGAP3-210ENST00000491467 APRG1Q8IVJ8 170 aa9.01□□□□□ -0.97
SRGAP3-210ENST00000491467 LAMTOR2Q9Y2Q5 125 aa9.01□□□□□ -0.97
SRGAP3-210ENST00000491467 DNAH1Q9P2D7 4330 aa9.01□□□□□ -0.97
SRGAP3-210ENST00000491467 IGHV4-4A0A075B6R2 117 aa9□□□□□ -0.97
SRGAP3-210ENST00000491467 TRAV21A0A0B4J279 112 aa9□□□□□ -0.97
SRGAP3-210ENST00000491467 RPLP1P05386 114 aaKnown RBP9□□□□□ -0.97
SRGAP3-210ENST00000491467 ZNF705DP0CH99 300 aaPredicted RBP9□□□□□ -0.97
SRGAP3-210ENST00000491467 ZNF705BP0CI00 300 aaPredicted RBP9□□□□□ -0.97
SRGAP3-210ENST00000491467 MED14OSP0DP75 135 aa9□□□□□ -0.97
SRGAP3-210ENST00000491467 NTF3P20783 257 aa9□□□□□ -0.97
SRGAP3-210ENST00000491467 RPL11P62913 178 aaKnown RBP9□□□□□ -0.97
SRGAP3-210ENST00000491467 TMEM95Q3KNT9 176 aa9□□□□□ -0.97
SRGAP3-210ENST00000491467 CDPF1Q6NVV7 123 aa9□□□□□ -0.97
SRGAP3-210ENST00000491467 TEX43Q6ZNM6 134 aa9□□□□□ -0.97
SRGAP3-210ENST00000491467 OR8A1Q8NGG7 326 aa9□□□□□ -0.97
SRGAP3-210ENST00000491467 C20orf173Q96LM9 149 aa9□□□□□ -0.97
SRGAP3-210ENST00000491467 FAM19A4Q96LR4 140 aa9□□□□□ -0.97
SRGAP3-210ENST00000491467 DUX5Q96PT3 197 aa9□□□□□ -0.97
SRGAP3-210ENST00000491467 ODF3Q96PU9 254 aa9□□□□□ -0.97
SRGAP3-210ENST00000491467 TMSB15BA0A087X1C1 80 aa8.99□□□□□ -0.97
SRGAP3-210ENST00000491467 M0R2Z0 102 aa8.99□□□□□ -0.97
SRGAP3-210ENST00000491467 TWIST1Q15672 202 aa8.99□□□□□ -0.97
SRGAP3-210ENST00000491467 PMCHL1Q16048 86 aa8.99□□□□□ -0.97
SRGAP3-210ENST00000491467 RNASEKQ6P5S7 137 aaKnown RBP8.99□□□□□ -0.97
SRGAP3-210ENST00000491467 LCNL1Q6ZST4 164 aa8.99□□□□□ -0.97
SRGAP3-210ENST00000491467 SMIM15Q7Z3B0 74 aa8.99□□□□□ -0.97
SRGAP3-210ENST00000491467 ZNF575Q86XF7 245 aa8.99□□□□□ -0.97
SRGAP3-210ENST00000491467 ORMDL3Q8N138 153 aa8.99□□□□□ -0.97
SRGAP3-210ENST00000491467 ZNF664Q8N3J9 261 aa8.99□□□□□ -0.97
SRGAP3-210ENST00000491467 TPPP3Q9BW30 176 aa8.99□□□□□ -0.97
SRGAP3-210ENST00000491467 IGKV3D-20A0A0C4DH25 116 aa8.98□□□□□ -0.97
SRGAP3-210ENST00000491467 LINC00587B1AMM8 73 aa8.98□□□□□ -0.97
SRGAP3-210ENST00000491467 C3orf84H3BNL1 204 aa8.98□□□□□ -0.97
SRGAP3-210ENST00000491467 SNAI2O43623 268 aa8.98□□□□□ -0.97
SRGAP3-210ENST00000491467 BTF3P20290 206 aaKnown RBP8.98□□□□□ -0.97
SRGAP3-210ENST00000491467 KPRPQ5T749 579 aaPredicted RBP8.98□□□□□ -0.97
SRGAP3-210ENST00000491467 DCANP1Q8TF63 244 aa8.98□□□□□ -0.97
SRGAP3-210ENST00000491467 LYSTQ99698 3801 aa8.98□□□□□ -0.97
SRGAP3-210ENST00000491467 TRAV2A0A0B4J234 112 aa8.97□□□□□ -0.97
SRGAP3-210ENST00000491467 TMEM213A2RRL7 107 aa8.97□□□□□ -0.97
SRGAP3-210ENST00000491467 C3orf79P0CE67 100 aa8.97□□□□□ -0.97
SRGAP3-210ENST00000491467 DDTP30046 118 aa8.97□□□□□ -0.97
SRGAP3-210ENST00000491467 KRTDAPP60985 99 aa8.97□□□□□ -0.97
SRGAP3-210ENST00000491467 SNRPD3P62318 126 aaKnown RBP8.97□□□□□ -0.97
SRGAP3-210ENST00000491467 FAM19A2Q8N3H0 131 aa8.97□□□□□ -0.97
SRGAP3-210ENST00000491467 ZFAND2AQ8N6M9 145 aa8.97□□□□□ -0.97
SRGAP3-210ENST00000491467 PRSS3P2Q8NHM4 247 aa8.97□□□□□ -0.97
SRGAP3-210ENST00000491467 URB1-AS1Q96HZ7 61 aa8.97□□□□□ -0.97
SRGAP3-210ENST00000491467 PRELID3AQ96N28 172 aa8.97□□□□□ -0.97
SRGAP3-210ENST00000491467 PEMTQ9UBM1 199 aa8.97□□□□□ -0.97
SRGAP3-210ENST00000491467 C20orf202A1L168 122 aa8.96□□□□□ -0.98
SRGAP3-210ENST00000491467 FAM181BA6NEQ2 426 aa8.96□□□□□ -0.98
SRGAP3-210ENST00000491467 K7EQG2 157 aa8.96□□□□□ -0.98
SRGAP3-210ENST00000491467 DUSP14O95147 198 aaKnown RBP8.96□□□□□ -0.98
SRGAP3-210ENST00000491467 LEPP41159 167 aa8.96□□□□□ -0.98
SRGAP3-210ENST00000491467 CTAG1AP78358 180 aa8.96□□□□□ -0.98
SRGAP3-210ENST00000491467 MRPL51Q4U2R6 128 aaKnown RBP8.96□□□□□ -0.98
SRGAP3-210ENST00000491467 FA2HQ7L5A8 372 aa8.96□□□□□ -0.98
SRGAP3-210ENST00000491467 KLHDC1Q8N7A1 406 aa8.96□□□□□ -0.98
SRGAP3-210ENST00000491467 C4orf3Q8WVX3 66 aa8.96□□□□□ -0.98
SRGAP3-210ENST00000491467 CITED1Q99966 193 aa8.96□□□□□ -0.98
SRGAP3-210ENST00000491467 C20orf144Q9BQM9 153 aa8.96□□□□□ -0.98
SRGAP3-210ENST00000491467 AP5S1Q9NUS5 200 aa8.96□□□□□ -0.98
SRGAP3-210ENST00000491467 HSPB8Q9UJY1 196 aa8.96□□□□□ -0.98
SRGAP3-210ENST00000491467 IGHV4OR15-8A0A075B7B6 117 aa8.95□□□□□ -0.98
SRGAP3-210ENST00000491467 A0A087WW49 117 aa8.95□□□□□ -0.98
SRGAP3-210ENST00000491467 KIR2DL5BA0A0G2JN68 375 aa8.95□□□□□ -0.98
SRGAP3-210ENST00000491467 KIR2DL5BA0A0G2JPC4 375 aa8.95□□□□□ -0.98
SRGAP3-210ENST00000491467 LCE6AA0A183 80 aa8.95□□□□□ -0.98
SRGAP3-210ENST00000491467 LINC01619G3V211 115 aa8.95□□□□□ -0.98
SRGAP3-210ENST00000491467 CRXO43186 299 aaPredicted RBP8.95□□□□□ -0.98
SRGAP3-210ENST00000491467 LEPROTL1O95214 131 aa8.95□□□□□ -0.98
SRGAP3-210ENST00000491467 HOXD3P31249 432 aaPredicted RBP8.95□□□□□ -0.98
SRGAP3-210ENST00000491467 CKS2P33552 79 aa8.95□□□□□ -0.98
SRGAP3-210ENST00000491467 C10orf99Q6UWK7 81 aa8.95□□□□□ -0.98
SRGAP3-210ENST00000491467 KIR2DL5AQ8N109 375 aa8.95□□□□□ -0.98
SRGAP3-210ENST00000491467 DPF1Q92782 380 aa8.95□□□□□ -0.98
SRGAP3-210ENST00000491467 TMEM70Q9BUB7 260 aa8.95□□□□□ -0.98
SRGAP3-210ENST00000491467 VAMP8Q9BV40 100 aa8.95□□□□□ -0.98
SRGAP3-210ENST00000491467 MS4A6AQ9H2W1 248 aa8.95□□□□□ -0.98
SRGAP3-210ENST00000491467 CSMD3Q7Z407 3707 aa8.94□□□□□ -0.98
SRGAP3-210ENST00000491467 LINC01546A6NGU7 62 aa8.94□□□□□ -0.98
SRGAP3-210ENST00000491467 C2orf70A6NJV1 201 aa8.94□□□□□ -0.98
SRGAP3-210ENST00000491467 PRSS47A8MTI9 375 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms