RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 NAGKQ9UJ70 344 aa5.7□□□□□ -1.5
LSM2-213ENST00000491421 ICOSQ9Y6W8 199 aa5.7□□□□□ -1.5
LSM2-213ENST00000491421 HMGB3O15347 200 aaKnown RBP5.69□□□□□ -1.5
LSM2-213ENST00000491421 PTTG1O95997 202 aa5.69□□□□□ -1.5
LSM2-213ENST00000491421 ARL14EPLP0DKL9 152 aa5.69□□□□□ -1.5
LSM2-213ENST00000491421 CDC34P49427 236 aaPredicted RBP5.69□□□□□ -1.5
LSM2-213ENST00000491421 CRYBA4P53673 196 aa5.69□□□□□ -1.5
LSM2-213ENST00000491421 FHL2Q14192 279 aa5.69□□□□□ -1.5
LSM2-213ENST00000491421 HSD17B11Q8NBQ5 300 aa5.69□□□□□ -1.5
LSM2-213ENST00000491421 C1orf43Q9BWL3 253 aa5.69□□□□□ -1.5
LSM2-213ENST00000491421 MED28Q9H204 178 aa5.69□□□□□ -1.5
LSM2-213ENST00000491421 CDIP1Q9H305 208 aa5.69□□□□□ -1.5
LSM2-213ENST00000491421 HHLA3Q9XRX5 114 aa5.69□□□□□ -1.5
LSM2-213ENST00000491421 ABCA13Q86UQ4 5058 aa5.69□□□□□ -1.5
LSM2-213ENST00000491421 TRAV8-1A0A0A6YYK1 113 aa5.68□□□□□ -1.5
LSM2-213ENST00000491421 TRAV21A0A0B4J279 112 aa5.68□□□□□ -1.5
LSM2-213ENST00000491421 TRGV4A0A0C4DH28 118 aa5.68□□□□□ -1.5
LSM2-213ENST00000491421 F6UZH7 168 aa5.68□□□□□ -1.5
LSM2-213ENST00000491421 SIVA1O15304 175 aa5.68□□□□□ -1.5
LSM2-213ENST00000491421 NXPH4O95158 308 aa5.68□□□□□ -1.5
LSM2-213ENST00000491421 SFTA3P0C7M3 94 aa5.68□□□□□ -1.5
LSM2-213ENST00000491421 GNG5P63218 68 aa5.68□□□□□ -1.5
LSM2-213ENST00000491421 MRPL23Q16540 153 aaKnown RBP5.68□□□□□ -1.5
LSM2-213ENST00000491421 TDRG1Q3Y452 100 aa5.68□□□□□ -1.5
LSM2-213ENST00000491421 DGAT2L7PQ6IED9 249 aa5.68□□□□□ -1.5
LSM2-213ENST00000491421 OR2G3Q8NGZ4 309 aa5.68□□□□□ -1.5
LSM2-213ENST00000491421 RASL10AQ92737 203 aa5.68□□□□□ -1.5
LSM2-213ENST00000491421 AQP10Q96PS8 301 aa5.68□□□□□ -1.5
LSM2-213ENST00000491421 TREM1Q9NP99 234 aa5.68□□□□□ -1.5
LSM2-213ENST00000491421 SERTM2A0A1B0GWG4 89 aa5.67□□□□□ -1.5
LSM2-213ENST00000491421 MBP02144 154 aa5.67□□□□□ -1.5
LSM2-213ENST00000491421 STAG3L2P0CL84 134 aa5.67□□□□□ -1.5
LSM2-213ENST00000491421 STAG3L3P0CL85 134 aa5.67□□□□□ -1.5
LSM2-213ENST00000491421 ATP6V0CP27449 155 aa5.67□□□□□ -1.5
LSM2-213ENST00000491421 CTAG1AP78358 180 aa5.67□□□□□ -1.5
LSM2-213ENST00000491421 NEGR1Q7Z3B1 354 aa5.67□□□□□ -1.5
LSM2-213ENST00000491421 SPATA12Q7Z6I5 190 aa5.67□□□□□ -1.5
LSM2-213ENST00000491421 LINC00528Q8N1L1 170 aa5.67□□□□□ -1.5
LSM2-213ENST00000491421 PCNPQ8WW12 178 aaKnown RBP5.67□□□□□ -1.5
LSM2-213ENST00000491421 TVP23CQ96ET8 276 aa5.67□□□□□ -1.5
LSM2-213ENST00000491421 ZNF479Q96JC4 524 aa5.67□□□□□ -1.5
LSM2-213ENST00000491421 NDFIP1Q9BT67 221 aa5.67□□□□□ -1.5
LSM2-213ENST00000491421 PSMG3Q9BT73 122 aaPredicted RBP5.67□□□□□ -1.5
LSM2-213ENST00000491421 SDF2L1Q9HCN8 221 aa5.67□□□□□ -1.5
LSM2-213ENST00000491421 TRAV4A0A0B4J268 109 aa5.66□□□□□ -1.5
LSM2-213ENST00000491421 IGHV3-16A0A0C4DH30 117 aa5.66□□□□□ -1.5
LSM2-213ENST00000491421 GAGE10A6NGK3 116 aa5.66□□□□□ -1.5
LSM2-213ENST00000491421 K7EQD1 137 aa5.66□□□□□ -1.5
LSM2-213ENST00000491421 K7EQM0 130 aa5.66□□□□□ -1.5
LSM2-213ENST00000491421 M0R2P5 195 aa5.66□□□□□ -1.5
LSM2-213ENST00000491421 GNRH2O43555 120 aa5.66□□□□□ -1.5
LSM2-213ENST00000491421 ORM1P02763 201 aa5.66□□□□□ -1.5
LSM2-213ENST00000491421 TCRAP04437 139 aa5.66□□□□□ -1.5
LSM2-213ENST00000491421 GIPP09681 153 aaPredicted RBP5.66□□□□□ -1.5
LSM2-213ENST00000491421 GYPEP15421 78 aa5.66□□□□□ -1.5
LSM2-213ENST00000491421 GCHFRP30047 84 aa5.66□□□□□ -1.5
LSM2-213ENST00000491421 SRIP30626 198 aa5.66□□□□□ -1.5
LSM2-213ENST00000491421 LINC00315P59091 139 aa5.66□□□□□ -1.5
LSM2-213ENST00000491421 SERF2P84101 59 aa5.66□□□□□ -1.5
LSM2-213ENST00000491421 Q5BKY6 102 aa5.66□□□□□ -1.5
LSM2-213ENST00000491421 LYPD5Q6UWN5 251 aa5.66□□□□□ -1.5
LSM2-213ENST00000491421 C5orf17Q8NAS9 161 aa5.66□□□□□ -1.5
LSM2-213ENST00000491421 INO80EQ8NBZ0 244 aaPredicted RBP5.66□□□□□ -1.5
LSM2-213ENST00000491421 OR4C5Q8NGB2 326 aa5.66□□□□□ -1.5
LSM2-213ENST00000491421 ASB13Q8WXK3 278 aa5.66□□□□□ -1.5
LSM2-213ENST00000491421 KCNS1Q96KK3 526 aa5.66□□□□□ -1.5
LSM2-213ENST00000491421 SGK494Q96LW2 274 aa5.66□□□□□ -1.5
LSM2-213ENST00000491421 TPPP3Q9BW30 176 aa5.66□□□□□ -1.5
LSM2-213ENST00000491421 SH3BGRL3Q9H299 93 aa5.66□□□□□ -1.5
LSM2-213ENST00000491421 LRP1BQ9NZR2 4599 aa5.65□□□□□ -1.5
LSM2-213ENST00000491421 FXYD6-FXYD2A0A087WZ82 144 aa5.65□□□□□ -1.5
LSM2-213ENST00000491421 BORCS7-ASMTA0A0B4J1R7 106 aa5.65□□□□□ -1.5
LSM2-213ENST00000491421 GGTLC3B5MD39 225 aa5.65□□□□□ -1.5
LSM2-213ENST00000491421 C9JCJ5 164 aa5.65□□□□□ -1.5
LSM2-213ENST00000491421 CDK2AP2O75956 126 aa5.65□□□□□ -1.5
LSM2-213ENST00000491421 CXorf1O96002 111 aa5.65□□□□□ -1.5
LSM2-213ENST00000491421 TYMSP04818 313 aa5.65□□□□□ -1.5
LSM2-213ENST00000491421 ACTR3CQ9C0K3 210 aaPredicted RBP5.65□□□□□ -1.5
LSM2-213ENST00000491421 TMEM167BQ9NRX6 74 aa5.65□□□□□ -1.5
LSM2-213ENST00000491421 TNFSF18Q9UNG2 199 aa5.65□□□□□ -1.5
LSM2-213ENST00000491421 DNAH5Q8TE73 4624 aa5.64□□□□□ -1.51
LSM2-213ENST00000491421 TRAV9-2A0A087WT02 112 aa5.64□□□□□ -1.51
LSM2-213ENST00000491421 RNF222A6NCQ9 220 aa5.64□□□□□ -1.51
LSM2-213ENST00000491421 TAAR5O14804 337 aa5.64□□□□□ -1.51
LSM2-213ENST00000491421 CIDEAO60543 219 aa5.64□□□□□ -1.51
LSM2-213ENST00000491421 GCGP01275 180 aa5.64□□□□□ -1.51
LSM2-213ENST00000491421 KRTAP10-2P60368 255 aa5.64□□□□□ -1.51
LSM2-213ENST00000491421 FLI1Q01543 452 aaPredicted RBP5.64□□□□□ -1.51
LSM2-213ENST00000491421 ZFP69Q49AA0 526 aa5.64□□□□□ -1.51
LSM2-213ENST00000491421 RPL7L1Q6DKI1 246 aaKnown RBP5.64□□□□□ -1.51
LSM2-213ENST00000491421 PRNTQ86SH4 94 aa5.64□□□□□ -1.51
LSM2-213ENST00000491421 CYB561D1Q8N8Q1 229 aa5.64□□□□□ -1.51
LSM2-213ENST00000491421 NHLRC2Q8NBF2 726 aa5.64□□□□□ -1.51
LSM2-213ENST00000491421 TXNDC17Q9BRA2 123 aa5.64□□□□□ -1.51
LSM2-213ENST00000491421 EPDR1Q9UM22 224 aa5.64□□□□□ -1.51
LSM2-213ENST00000491421 PSG8Q9UQ74 426 aa5.64□□□□□ -1.51
LSM2-213ENST00000491421 LY96Q9Y6Y9 160 aa5.64□□□□□ -1.51
LSM2-213ENST00000491421 MUC4Q99102 2169 aa5.63□□□□□ -1.51
LSM2-213ENST00000491421 HSPG2P98160 4391 aa5.63□□□□□ -1.51
LSM2-213ENST00000491421 A0A087WWL8 130 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms