RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 CSMD3Q7Z407 3707 aa5.57□□□□□ -1.52
CLDN1-202ENST00000490800 AGRNO00468 2067 aa5.56□□□□□ -1.52
CLDN1-202ENST00000490800 LCE6AA0A183 80 aa5.56□□□□□ -1.52
CLDN1-202ENST00000490800 C19orf71A6NCJ1 209 aa5.56□□□□□ -1.52
CLDN1-202ENST00000490800 RBMY1BA6NDE4 496 aaKnown RBP5.56□□□□□ -1.52
CLDN1-202ENST00000490800 RBMY1EA6NEQ0 496 aaKnown RBP5.56□□□□□ -1.52
CLDN1-202ENST00000490800 OR11H12B2RN74 326 aa5.56□□□□□ -1.52
CLDN1-202ENST00000490800 PPP1R2P9O14990 202 aa5.56□□□□□ -1.52
CLDN1-202ENST00000490800 RBMY1DP0C7P1 496 aaKnown RBP5.56□□□□□ -1.52
CLDN1-202ENST00000490800 CT45A10P0DMU9 189 aa5.56□□□□□ -1.52
CLDN1-202ENST00000490800 CRIP1P50238 77 aa5.56□□□□□ -1.52
CLDN1-202ENST00000490800 ZNF138P52744 262 aa5.56□□□□□ -1.52
CLDN1-202ENST00000490800 ERVFC1-1P60608 527 aa5.56□□□□□ -1.52
CLDN1-202ENST00000490800 HIST1H1AQ02539 215 aaPredicted RBP5.56□□□□□ -1.52
CLDN1-202ENST00000490800 SAPCD1Q5SSQ6 148 aa5.56□□□□□ -1.52
CLDN1-202ENST00000490800 LCE1DQ5T752 114 aa5.56□□□□□ -1.52
CLDN1-202ENST00000490800 TMEM78Q5T7P6 136 aa5.56□□□□□ -1.52
CLDN1-202ENST00000490800 PRR27Q6MZM9 219 aa5.56□□□□□ -1.52
CLDN1-202ENST00000490800 FAM231DQ6ZW35 169 aa5.56□□□□□ -1.52
CLDN1-202ENST00000490800 OR10J6PQ8NGY7 276 aa5.56□□□□□ -1.52
CLDN1-202ENST00000490800 LINC00477Q96M19 166 aa5.56□□□□□ -1.52
CLDN1-202ENST00000490800 YPEL4Q96NS1 127 aa5.56□□□□□ -1.52
CLDN1-202ENST00000490800 SPAG8Q99932 426 aaPredicted RBP5.56□□□□□ -1.52
CLDN1-202ENST00000490800 FAM110AQ9BQ89 295 aa5.56□□□□□ -1.52
CLDN1-202ENST00000490800 KRTAP4-7Q9BYR0 210 aa5.56□□□□□ -1.52
CLDN1-202ENST00000490800 WFDC10AQ9H1F0 79 aa5.56□□□□□ -1.52
CLDN1-202ENST00000490800 BIN3Q9NQY0 253 aa5.56□□□□□ -1.52
CLDN1-202ENST00000490800 PPP1R14DQ9NXH3 145 aa5.56□□□□□ -1.52
CLDN1-202ENST00000490800 V9GYV3 84 aa5.56□□□□□ -1.52
CLDN1-202ENST00000490800 A0A0J9YX75 114 aa5.55□□□□□ -1.52
CLDN1-202ENST00000490800 CXorf65A6NEN9 183 aa5.55□□□□□ -1.52
CLDN1-202ENST00000490800 OR4C46A6NHA9 309 aa5.55□□□□□ -1.52
CLDN1-202ENST00000490800 GATCO43716 136 aaKnown RBP5.55□□□□□ -1.52
CLDN1-202ENST00000490800 PFN1P07737 140 aaKnown RBP5.55□□□□□ -1.52
CLDN1-202ENST00000490800 ZNF80P51504 273 aaPredicted RBP5.55□□□□□ -1.52
CLDN1-202ENST00000490800 IBA57Q5T440 356 aaKnown RBP5.55□□□□□ -1.52
CLDN1-202ENST00000490800 GDF5OSQ5U4N7 250 aa5.55□□□□□ -1.52
CLDN1-202ENST00000490800 C15orf54Q8N8G6 183 aa5.55□□□□□ -1.52
CLDN1-202ENST00000490800 FAM19A4Q96LR4 140 aa5.55□□□□□ -1.52
CLDN1-202ENST00000490800 NDFIP1Q9BT67 221 aa5.55□□□□□ -1.52
CLDN1-202ENST00000490800 SRD5A3Q9H8P0 318 aa5.55□□□□□ -1.52
CLDN1-202ENST00000490800 EPPK1P58107 5090 aaKnown RBP5.55□□□□□ -1.52
CLDN1-202ENST00000490800 KNCNA6PVL3 124 aa5.54□□□□□ -1.52
CLDN1-202ENST00000490800 COLCA2A8K830 154 aa5.54□□□□□ -1.52
CLDN1-202ENST00000490800 ZNF705GA8MUZ8 300 aaPredicted RBP5.54□□□□□ -1.52
CLDN1-202ENST00000490800 SH2D1AO60880 128 aa5.54□□□□□ -1.52
CLDN1-202ENST00000490800 DEFB131AP59861 70 aa5.54□□□□□ -1.52
CLDN1-202ENST00000490800 ELOBQ15370 118 aa5.54□□□□□ -1.52
CLDN1-202ENST00000490800 ODF3L2Q3SX64 289 aa5.54□□□□□ -1.52
CLDN1-202ENST00000490800 SMUG1Q53HV7 270 aa5.54□□□□□ -1.52
CLDN1-202ENST00000490800 FAM162BQ5T6X4 162 aa5.54□□□□□ -1.52
CLDN1-202ENST00000490800 PRR9Q5T870 116 aa5.54□□□□□ -1.52
CLDN1-202ENST00000490800 EBLN2Q6P2I7 272 aa5.54□□□□□ -1.52
CLDN1-202ENST00000490800 FOXI2Q6ZQN5 318 aa5.54□□□□□ -1.52
CLDN1-202ENST00000490800 ZFAND2AQ8N6M9 145 aa5.54□□□□□ -1.52
CLDN1-202ENST00000490800 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.54□□□□□ -1.52
CLDN1-202ENST00000490800 IMMP2LQ96T52 175 aa5.54□□□□□ -1.52
CLDN1-202ENST00000490800 LYSTQ99698 3801 aa5.54□□□□□ -1.52
CLDN1-202ENST00000490800 SAV1Q9H4B6 383 aaPredicted RBP5.54□□□□□ -1.52
CLDN1-202ENST00000490800 MAP6D1Q9H9H5 199 aa5.54□□□□□ -1.52
CLDN1-202ENST00000490800 IL36BQ9NZH7 164 aa5.54□□□□□ -1.52
CLDN1-202ENST00000490800 LENEPQ9Y5L5 61 aa5.54□□□□□ -1.52
CLDN1-202ENST00000490800 URGCP-MRPS24S4R325 110 aa5.54□□□□□ -1.52
CLDN1-202ENST00000490800 DNAH1Q9P2D7 4330 aa5.54□□□□□ -1.52
CLDN1-202ENST00000490800 TRBV7-9A0A0J9YWB2 115 aa5.53□□□□□ -1.52
CLDN1-202ENST00000490800 A8MTW9 85 aa5.53□□□□□ -1.52
CLDN1-202ENST00000490800 DUSP14O95147 198 aaKnown RBP5.53□□□□□ -1.52
CLDN1-202ENST00000490800 CA1P00915 261 aaPredicted RBP5.53□□□□□ -1.52
CLDN1-202ENST00000490800 P01737 135 aa5.53□□□□□ -1.52
CLDN1-202ENST00000490800 CXCL1P09341 107 aa5.53□□□□□ -1.52
CLDN1-202ENST00000490800 CRISP2P16562 243 aa5.53□□□□□ -1.52
CLDN1-202ENST00000490800 APRG1Q8IVJ8 170 aa5.53□□□□□ -1.52
CLDN1-202ENST00000490800 OR4B1Q8NGF8 309 aa5.53□□□□□ -1.52
CLDN1-202ENST00000490800 IL17DQ8TAD2 202 aa5.53□□□□□ -1.52
CLDN1-202ENST00000490800 DAZAP1Q96EP5 407 aaKnown RBP5.53□□□□□ -1.52
CLDN1-202ENST00000490800 ODF3Q96PU9 254 aa5.53□□□□□ -1.52
CLDN1-202ENST00000490800 RPP21Q9H633 154 aaKnown RBP5.53□□□□□ -1.52
CLDN1-202ENST00000490800 HYDINQ4G0P3 5121 aa5.53□□□□□ -1.52
CLDN1-202ENST00000490800 TGIF2-C20orf24A0A0A6YYL0 155 aa5.52□□□□□ -1.53
CLDN1-202ENST00000490800 SMIM27A0A1W2PRY6 76 aa5.52□□□□□ -1.53
CLDN1-202ENST00000490800 GAGE12BA1L429 117 aa5.52□□□□□ -1.53
CLDN1-202ENST00000490800 GAGE12HA6NDE8 117 aa5.52□□□□□ -1.53
CLDN1-202ENST00000490800 KLLNB2CW77 178 aa5.52□□□□□ -1.53
CLDN1-202ENST00000490800 H3BMM0 161 aa5.52□□□□□ -1.53
CLDN1-202ENST00000490800 HLA-DRB4P13762 266 aa5.52□□□□□ -1.53
CLDN1-202ENST00000490800 S100PP25815 95 aa5.52□□□□□ -1.53
CLDN1-202ENST00000490800 TCL1AP56279 114 aa5.52□□□□□ -1.53
CLDN1-202ENST00000490800 FAM3BP58499 235 aaPredicted RBP5.52□□□□□ -1.53
CLDN1-202ENST00000490800 RPL19P84098 196 aaKnown RBP5.52□□□□□ -1.53
CLDN1-202ENST00000490800 ACTL10Q5JWF8 245 aa5.52□□□□□ -1.53
CLDN1-202ENST00000490800 KCNIP4Q6PIL6 250 aa5.52□□□□□ -1.53
CLDN1-202ENST00000490800 AMTNQ6UX39 209 aa5.52□□□□□ -1.53
CLDN1-202ENST00000490800 Q6ZQT7 251 aa5.52□□□□□ -1.53
CLDN1-202ENST00000490800 OR2D3Q8NGH3 330 aa5.52□□□□□ -1.53
CLDN1-202ENST00000490800 TSKUQ8WUA8 353 aa5.52□□□□□ -1.53
CLDN1-202ENST00000490800 PYGO2Q9BRQ0 406 aa5.52□□□□□ -1.53
CLDN1-202ENST00000490800 HLA-DRB4X5D2U9 266 aa5.52□□□□□ -1.53
CLDN1-202ENST00000490800 BIRC6Q9NR09 4857 aa5.51□□□□□ -1.53
CLDN1-202ENST00000490800 TRGV11A0A075B6L2 103 aa5.51□□□□□ -1.53
CLDN1-202ENST00000490800 TRBV24-1A0A075B6N3 115 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms