RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 SUMO1P63165 101 aaKnown RBP21.61■■□□□ 1.05
LDB1-204ENST00000490751 IQCF2Q8IXL9 164 aa21.61■■□□□ 1.05
LDB1-204ENST00000490751 TRGV4A0A0C4DH28 118 aa21.6■■□□□ 1.05
LDB1-204ENST00000490751 IGHV3-16A0A0C4DH30 117 aa21.6■■□□□ 1.05
LDB1-204ENST00000490751 K7EQM0 130 aa21.6■■□□□ 1.05
LDB1-204ENST00000490751 ZNF479Q96JC4 524 aa21.6■■□□□ 1.05
LDB1-204ENST00000490751 TYMSP04818 313 aa21.59■■□□□ 1.05
LDB1-204ENST00000490751 SDF2L1Q9HCN8 221 aa21.59■■□□□ 1.05
LDB1-204ENST00000490751 PSG8Q9UQ74 426 aa21.59■■□□□ 1.05
LDB1-204ENST00000490751 KCNS1Q96KK3 526 aa21.58■■□□□ 1.05
LDB1-204ENST00000490751 EPDR1Q9UM22 224 aa21.58■■□□□ 1.05
LDB1-204ENST00000490751 A0A1W2PPQ1 181 aa21.57■■□□□ 1.04
LDB1-204ENST00000490751 ZNF726P1Q15940 193 aa21.57■■□□□ 1.04
LDB1-204ENST00000490751 CTXND1A0A1B0GTU2 59 aa21.56■■□□□ 1.04
LDB1-204ENST00000490751 M0R2P5 195 aa21.56■■□□□ 1.04
LDB1-204ENST00000490751 MED14OSP0DP75 135 aa21.56■■□□□ 1.04
LDB1-204ENST00000490751 FLI1Q01543 452 aaPredicted RBP21.56■■□□□ 1.04
LDB1-204ENST00000490751 MRPL23Q16540 153 aaKnown RBP21.56■■□□□ 1.04
LDB1-204ENST00000490751 ZNF575Q86XF7 245 aa21.56■■□□□ 1.04
LDB1-204ENST00000490751 CYB561D1Q8N8Q1 229 aa21.56■■□□□ 1.04
LDB1-204ENST00000490751 ARPC5O15511 151 aa21.55■■□□□ 1.04
LDB1-204ENST00000490751 IGLV2-11P01706 119 aa21.55■■□□□ 1.04
LDB1-204ENST00000490751 ZNF80P51504 273 aaPredicted RBP21.55■■□□□ 1.04
LDB1-204ENST00000490751 TRAV4A0A0B4J268 109 aa21.54■■□□□ 1.04
LDB1-204ENST00000490751 A0A1W2PRE2 83 aa21.54■■□□□ 1.04
LDB1-204ENST00000490751 PRNTQ86SH4 94 aa21.54■■□□□ 1.04
LDB1-204ENST00000490751 GCGP01275 180 aa21.53■■□□□ 1.04
LDB1-204ENST00000490751 AKR1C8PQ5T2L2 129 aa21.53■■□□□ 1.04
LDB1-204ENST00000490751 TMEM75Q8N9X5 138 aa21.53■■□□□ 1.04
LDB1-204ENST00000490751 TAAR5O14804 337 aa21.52■■□□□ 1.04
LDB1-204ENST00000490751 NXPH4O95158 308 aa21.52■■□□□ 1.04
LDB1-204ENST00000490751 ZFP69Q49AA0 526 aa21.52■■□□□ 1.04
LDB1-204ENST00000490751 OR4C5Q8NGB2 326 aa21.52■■□□□ 1.04
LDB1-204ENST00000490751 C11orf21Q9P2W6 132 aa21.52■■□□□ 1.04
LDB1-204ENST00000490751 SIVA1O15304 175 aa21.51■■□□□ 1.03
LDB1-204ENST00000490751 SMUG1Q53HV7 270 aa21.51■■□□□ 1.03
LDB1-204ENST00000490751 LYPD5Q6UWN5 251 aa21.51■■□□□ 1.03
LDB1-204ENST00000490751 NEGR1Q7Z3B1 354 aa21.51■■□□□ 1.03
LDB1-204ENST00000490751 CYTL1Q9NRR1 136 aa21.51■■□□□ 1.03
LDB1-204ENST00000490751 FBLL1A6NHQ2 334 aaKnown RBP21.5■■□□□ 1.03
LDB1-204ENST00000490751 SMLR1H3BR10 107 aa21.5■■□□□ 1.03
LDB1-204ENST00000490751 K7EQD1 137 aa21.5■■□□□ 1.03
LDB1-204ENST00000490751 UBE2G2P60604 165 aa21.5■■□□□ 1.03
LDB1-204ENST00000490751 PCNPQ8WW12 178 aaKnown RBP21.5■■□□□ 1.03
LDB1-204ENST00000490751 PFN1P07737 140 aaKnown RBP21.49■■□□□ 1.03
LDB1-204ENST00000490751 GYPEP15421 78 aa21.49■■□□□ 1.03
LDB1-204ENST00000490751 SRIP30626 198 aa21.49■■□□□ 1.03
LDB1-204ENST00000490751 FGF8P55075 233 aaPredicted RBP21.49■■□□□ 1.03
LDB1-204ENST00000490751 SAPCD1Q5SSQ6 148 aa21.48■■□□□ 1.03
LDB1-204ENST00000490751 LINC00479Q96M42 142 aa21.48■■□□□ 1.03
LDB1-204ENST00000490751 IFNA7P01567 189 aa21.47■■□□□ 1.03
LDB1-204ENST00000490751 ORM1P02763 201 aa21.47■■□□□ 1.03
LDB1-204ENST00000490751 BTF3P20290 206 aaKnown RBP21.47■■□□□ 1.03
LDB1-204ENST00000490751 TRAV34A0A0B4J273 112 aa21.46■■□□□ 1.03
LDB1-204ENST00000490751 C9JCJ5 164 aa21.46■■□□□ 1.03
LDB1-204ENST00000490751 LINC00315P59091 139 aa21.45■■□□□ 1.02
LDB1-204ENST00000490751 MAP1LC3B2A6NCE7 125 aa21.44■■□□□ 1.02
LDB1-204ENST00000490751 FAM74A7A6NL05 159 aa21.44■■□□□ 1.02
LDB1-204ENST00000490751 C16orf90A8MZG2 172 aa21.44■■□□□ 1.02
LDB1-204ENST00000490751 PEX7O00628 323 aa21.44■■□□□ 1.02
LDB1-204ENST00000490751 PPT1P50897 306 aa21.44■■□□□ 1.02
LDB1-204ENST00000490751 ZNF876PQ49A33 203 aa21.44■■□□□ 1.02
LDB1-204ENST00000490751 MAP1LC3BQ9GZQ8 125 aa21.44■■□□□ 1.02
LDB1-204ENST00000490751 ARL2-SNX15V9GYD0 113 aa21.44■■□□□ 1.02
LDB1-204ENST00000490751 C9orf85Q96MD7 179 aa21.43■■□□□ 1.02
LDB1-204ENST00000490751 NKX6-2Q9C056 277 aaPredicted RBP21.43■■□□□ 1.02
LDB1-204ENST00000490751 GATA1P15976 413 aaPredicted RBP21.42■■□□□ 1.02
LDB1-204ENST00000490751 TXNDC17Q9BRA2 123 aa21.42■■□□□ 1.02
LDB1-204ENST00000490751 LOC100131303A0A0U1RQF7 123 aa21.41■■□□□ 1.02
LDB1-204ENST00000490751 Q86TA4 180 aa21.41■■□□□ 1.02
LDB1-204ENST00000490751 KCNRGQ8N5I3 272 aa21.41■■□□□ 1.02
LDB1-204ENST00000490751 ZNF345Q14585 488 aa21.4■■□□□ 1.02
LDB1-204ENST00000490751 DPPA3Q6W0C5 159 aa21.4■■□□□ 1.02
LDB1-204ENST00000490751 HIST1H2BAQ96A08 127 aa21.4■■□□□ 1.02
LDB1-204ENST00000490751 RS1O15537 224 aa21.39■■□□□ 1.01
LDB1-204ENST00000490751 RNASE3P12724 160 aaKnown RBP21.39■■□□□ 1.01
LDB1-204ENST00000490751 KRTAP17-1Q9BYP8 105 aa21.39■■□□□ 1.01
LDB1-204ENST00000490751 CFAP126Q5VTH2 177 aa21.38■■□□□ 1.01
LDB1-204ENST00000490751 SPATA12Q7Z6I5 190 aa21.38■■□□□ 1.01
LDB1-204ENST00000490751 WFDC10BQ8IUB3 73 aa21.38■■□□□ 1.01
LDB1-204ENST00000490751 IGKV3D-20A0A0C4DH25 116 aa21.37■■□□□ 1.01
LDB1-204ENST00000490751 PGPEP1LA6NFU8 196 aa21.37■■□□□ 1.01
LDB1-204ENST00000490751 FHITP49789 147 aa21.37■■□□□ 1.01
LDB1-204ENST00000490751 ZNF506Q5JVG8 444 aa21.37■■□□□ 1.01
LDB1-204ENST00000490751 Q6ZRN7 208 aaPredicted RBP21.37■■□□□ 1.01
LDB1-204ENST00000490751 NHLRC2Q8NBF2 726 aa21.37■■□□□ 1.01
LDB1-204ENST00000490751 STOML3Q8TAV4 291 aa21.37■■□□□ 1.01
LDB1-204ENST00000490751 LY96Q9Y6Y9 160 aa21.37■■□□□ 1.01
LDB1-204ENST00000490751 LRP1BQ9NZR2 4599 aa21.36■■□□□ 1.01
LDB1-204ENST00000490751 FABP5P3A8MUU1 101 aa21.36■■□□□ 1.01
LDB1-204ENST00000490751 OR11H4Q8NGC9 324 aa21.36■■□□□ 1.01
LDB1-204ENST00000490751 PTH2Q96A98 100 aa21.36■■□□□ 1.01
LDB1-204ENST00000490751 RYR1P21817 5038 aa21.35■■□□□ 1.01
LDB1-204ENST00000490751 CIDEAO60543 219 aa21.35■■□□□ 1.01
LDB1-204ENST00000490751 SH2D6Q7Z4S9 175 aa21.35■■□□□ 1.01
LDB1-204ENST00000490751 IGHV3-73A0A0B4J1V6 119 aa21.34■■□□□ 1.01
LDB1-204ENST00000490751 HMSDA8MTL9 139 aa21.34■■□□□ 1.01
LDB1-204ENST00000490751 SLC25A29Q8N8R3 303 aa21.34■■□□□ 1.01
LDB1-204ENST00000490751 S100A4P26447 101 aaKnown RBP21.33■■□□□ 1.01
LDB1-204ENST00000490751 TNFRSF18Q9Y5U5 241 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms