RNA–Protein interactions for RNA: ENST00000490387.1

RAPGEF3-212, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-212ENST00000490387 TMEM263Q8WUH6 116 aaKnown RBP12.22□□□□□ -0.45
RAPGEF3-212ENST00000490387 DNAH1Q9P2D7 4330 aa12.21□□□□□ -0.45
RAPGEF3-212ENST00000490387 PGPEP1LA6NFU8 196 aa12.21□□□□□ -0.45
RAPGEF3-212ENST00000490387 FABP5P3A8MUU1 101 aa12.21□□□□□ -0.45
RAPGEF3-212ENST00000490387 SH2D1AO60880 128 aa12.21□□□□□ -0.45
RAPGEF3-212ENST00000490387 MUC21Q5SSG8 566 aa12.21□□□□□ -0.45
RAPGEF3-212ENST00000490387 FAM162BQ5T6X4 162 aa12.21□□□□□ -0.45
RAPGEF3-212ENST00000490387 ZNF493Q6ZR52 646 aa12.21□□□□□ -0.45
RAPGEF3-212ENST00000490387 C11orf72Q8NBR9 251 aa12.21□□□□□ -0.45
RAPGEF3-212ENST00000490387 C16orf74Q96GX8 76 aa12.21□□□□□ -0.45
RAPGEF3-212ENST00000490387 TP53TG3Q9ULZ0 132 aa12.21□□□□□ -0.45
RAPGEF3-212ENST00000490387 TMEM189A5PLL7 270 aa12.2□□□□□ -0.46
RAPGEF3-212ENST00000490387 HTN1P15515 57 aa12.2□□□□□ -0.46
RAPGEF3-212ENST00000490387 IGKV3D-20A0A0C4DH25 116 aa12.19□□□□□ -0.46
RAPGEF3-212ENST00000490387 LINC00862A6NCI5 91 aa12.19□□□□□ -0.46
RAPGEF3-212ENST00000490387 CBY3A6NI87 242 aa12.19□□□□□ -0.46
RAPGEF3-212ENST00000490387 CEBPGP53567 150 aa12.19□□□□□ -0.46
RAPGEF3-212ENST00000490387 FAM159AQ6UWV7 190 aa12.19□□□□□ -0.46
RAPGEF3-212ENST00000490387 ZNF575Q86XF7 245 aa12.19□□□□□ -0.46
RAPGEF3-212ENST00000490387 SMIM7Q9BQ49 75 aa12.19□□□□□ -0.46
RAPGEF3-212ENST00000490387 NAGKQ9UJ70 344 aa12.19□□□□□ -0.46
RAPGEF3-212ENST00000490387 K7EN84 100 aa12.18□□□□□ -0.46
RAPGEF3-212ENST00000490387 TYMSP04818 313 aa12.18□□□□□ -0.46
RAPGEF3-212ENST00000490387 LINC01559Q495D7 138 aa12.18□□□□□ -0.46
RAPGEF3-212ENST00000490387 IBA57Q5T440 356 aaKnown RBP12.18□□□□□ -0.46
RAPGEF3-212ENST00000490387 CEMP1Q6PRD7 247 aaPredicted RBP12.18□□□□□ -0.46
RAPGEF3-212ENST00000490387 OCC1Q8TAD7 63 aa12.18□□□□□ -0.46
RAPGEF3-212ENST00000490387 KCNS1Q96KK3 526 aa12.18□□□□□ -0.46
RAPGEF3-212ENST00000490387 CELA1Q9UNI1 258 aa12.18□□□□□ -0.46
RAPGEF3-212ENST00000490387 LY96Q9Y6Y9 160 aa12.18□□□□□ -0.46
RAPGEF3-212ENST00000490387 ALMS1Q8TCU4 4167 aa12.17□□□□□ -0.46
RAPGEF3-212ENST00000490387 C19orf71A6NCJ1 209 aa12.17□□□□□ -0.46
RAPGEF3-212ENST00000490387 ZNF727A8MUV8 499 aa12.17□□□□□ -0.46
RAPGEF3-212ENST00000490387 TCL1AP56279 114 aa12.17□□□□□ -0.46
RAPGEF3-212ENST00000490387 FAM74A3Q4VXF1 159 aa12.17□□□□□ -0.46
RAPGEF3-212ENST00000490387 SDF2L1Q9HCN8 221 aa12.17□□□□□ -0.46
RAPGEF3-212ENST00000490387 DKK2Q9UBU2 259 aa12.17□□□□□ -0.46
RAPGEF3-212ENST00000490387 KLK5Q9Y337 293 aaPredicted RBP12.17□□□□□ -0.46
RAPGEF3-212ENST00000490387 TRGV11A0A075B6L2 103 aa12.16□□□□□ -0.46
RAPGEF3-212ENST00000490387 IGHV3-16A0A0C4DH30 117 aa12.16□□□□□ -0.46
RAPGEF3-212ENST00000490387 KRBOX1C9JBD0 128 aa12.16□□□□□ -0.46
RAPGEF3-212ENST00000490387 GNRH2O43555 120 aa12.16□□□□□ -0.46
RAPGEF3-212ENST00000490387 MGST1P10620 155 aaKnown RBP12.16□□□□□ -0.46
RAPGEF3-212ENST00000490387 EMP1P54849 157 aa12.16□□□□□ -0.46
RAPGEF3-212ENST00000490387 PRR27Q6MZM9 219 aa12.16□□□□□ -0.46
RAPGEF3-212ENST00000490387 UQCC3Q6UW78 93 aa12.16□□□□□ -0.46
RAPGEF3-212ENST00000490387 LINC00476Q8WZB0 136 aa12.16□□□□□ -0.46
RAPGEF3-212ENST00000490387 GSN-AS1Q9NRJ2 163 aa12.16□□□□□ -0.46
RAPGEF3-212ENST00000490387 MDFICQ9P1T7 246 aa12.16□□□□□ -0.46
RAPGEF3-212ENST00000490387 LY6G6CO95867 125 aa12.15□□□□□ -0.46
RAPGEF3-212ENST00000490387 SFTA3P0C7M3 94 aa12.15□□□□□ -0.46
RAPGEF3-212ENST00000490387 DAZ2Q13117 558 aaKnown RBP12.15□□□□□ -0.46
RAPGEF3-212ENST00000490387 OR5I1Q13606 314 aa12.15□□□□□ -0.46
RAPGEF3-212ENST00000490387 SOHLH1Q5JUK2 328 aa12.15□□□□□ -0.46
RAPGEF3-212ENST00000490387 DNLZQ5SXM8 178 aa12.15□□□□□ -0.46
RAPGEF3-212ENST00000490387 FAM222AQ5U5X8 452 aa12.15□□□□□ -0.46
RAPGEF3-212ENST00000490387 LINC01551Q86U37 167 aa12.15□□□□□ -0.46
RAPGEF3-212ENST00000490387 COMMD7Q86VX2 200 aa12.15□□□□□ -0.46
RAPGEF3-212ENST00000490387 PHLDA1Q8WV24 401 aaPredicted RBP12.15□□□□□ -0.46
RAPGEF3-212ENST00000490387 BIN3Q9NQY0 253 aa12.15□□□□□ -0.46
RAPGEF3-212ENST00000490387 TIMM8BQ9Y5J9 83 aaPredicted RBP12.15□□□□□ -0.46
RAPGEF3-212ENST00000490387 LYRM9A8MSI8 78 aa12.14□□□□□ -0.47
RAPGEF3-212ENST00000490387 M0R036 132 aa12.14□□□□□ -0.47
RAPGEF3-212ENST00000490387 ORM1P02763 201 aa12.14□□□□□ -0.47
RAPGEF3-212ENST00000490387 ZNF415Q09FC8 603 aa12.14□□□□□ -0.47
RAPGEF3-212ENST00000490387 LINC00612Q8N6U2 182 aa12.14□□□□□ -0.47
RAPGEF3-212ENST00000490387 MUC4Q99102 2169 aa12.13□□□□□ -0.47
RAPGEF3-212ENST00000490387 HYDINQ4G0P3 5121 aa12.13□□□□□ -0.47
RAPGEF3-212ENST00000490387 TEX48A0A1B0GUV7 120 aa12.13□□□□□ -0.47
RAPGEF3-212ENST00000490387 B4DEV8 164 aa12.13□□□□□ -0.47
RAPGEF3-212ENST00000490387 SPART-AS1P0CW21 52 aa12.13□□□□□ -0.47
RAPGEF3-212ENST00000490387 RNASE3P12724 160 aaKnown RBP12.13□□□□□ -0.47
RAPGEF3-212ENST00000490387 C11orf45Q8TAV5 145 aa12.13□□□□□ -0.47
RAPGEF3-212ENST00000490387 C9orf85Q96MD7 179 aa12.13□□□□□ -0.47
RAPGEF3-212ENST00000490387 NOP10Q9NPE3 64 aaKnown RBP12.13□□□□□ -0.47
RAPGEF3-212ENST00000490387 PLECQ15149 4684 aaKnown RBP12.13□□□□□ -0.47
RAPGEF3-212ENST00000490387 SNURFLB1AK76 121 aa12.12□□□□□ -0.47
RAPGEF3-212ENST00000490387 CXCL1P09341 107 aa12.12□□□□□ -0.47
RAPGEF3-212ENST00000490387 NANOS2P60321 138 aaKnown RBP12.12□□□□□ -0.47
RAPGEF3-212ENST00000490387 RPL19P84098 196 aaKnown RBP12.12□□□□□ -0.47
RAPGEF3-212ENST00000490387 TMEM241Q24JQ0 296 aa12.12□□□□□ -0.47
RAPGEF3-212ENST00000490387 NAT8Q9UHE5 227 aa12.12□□□□□ -0.47
RAPGEF3-212ENST00000490387 SPINK4O60575 86 aa12.11□□□□□ -0.47
RAPGEF3-212ENST00000490387 RPL23P62829 140 aaKnown RBP12.11□□□□□ -0.47
RAPGEF3-212ENST00000490387 C12orf74Q32Q52 190 aa12.11□□□□□ -0.47
RAPGEF3-212ENST00000490387 FAM231DQ6ZW35 169 aa12.11□□□□□ -0.47
RAPGEF3-212ENST00000490387 NUDT10Q8NFP7 164 aa12.11□□□□□ -0.47
RAPGEF3-212ENST00000490387 NUDT11Q96G61 164 aa12.11□□□□□ -0.47
RAPGEF3-212ENST00000490387 SPXQ9BT56 116 aa12.11□□□□□ -0.47
RAPGEF3-212ENST00000490387 TMSB15BA0A087X1C1 80 aa12.1□□□□□ -0.47
RAPGEF3-212ENST00000490387 P01737 135 aa12.1□□□□□ -0.47
RAPGEF3-212ENST00000490387 ASIPP42127 132 aa12.1□□□□□ -0.47
RAPGEF3-212ENST00000490387 LGALS9BQ3B8N2 356 aa12.1□□□□□ -0.47
RAPGEF3-212ENST00000490387 Q6ZTI0 123 aa12.1□□□□□ -0.47
RAPGEF3-212ENST00000490387 DAZAP1Q96EP5 407 aaKnown RBP12.1□□□□□ -0.47
RAPGEF3-212ENST00000490387 RNASE7Q9H1E1 156 aaKnown RBP12.1□□□□□ -0.47
RAPGEF3-212ENST00000490387 IL36BQ9NZH7 164 aa12.1□□□□□ -0.47
RAPGEF3-212ENST00000490387 TMEM218A2RU14 115 aa12.09□□□□□ -0.47
RAPGEF3-212ENST00000490387 GRIFINA4D1Z8 144 aa12.09□□□□□ -0.47
RAPGEF3-212ENST00000490387 ADCYAP1P18509 176 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms