RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 PRR9Q5T870 116 aa4.3□□□□□ -1.72
PRPF40A-210ENST00000489741 TRIQKQ629K1 86 aa4.3□□□□□ -1.72
PRPF40A-210ENST00000489741 LYPD5Q6UWN5 251 aa4.3□□□□□ -1.72
PRPF40A-210ENST00000489741 IQCF2Q8IXL9 164 aa4.3□□□□□ -1.72
PRPF40A-210ENST00000489741 C12orf45Q8N5I9 185 aaPredicted RBP4.3□□□□□ -1.72
PRPF40A-210ENST00000489741 EIF4E3Q8N5X7 224 aaKnown RBP4.3□□□□□ -1.72
PRPF40A-210ENST00000489741 TMEM252Q8N6L7 170 aa4.3□□□□□ -1.72
PRPF40A-210ENST00000489741 ST6GAL2Q96JF0 529 aa4.3□□□□□ -1.72
PRPF40A-210ENST00000489741 FAM167A-AS1Q96KT0 104 aa4.3□□□□□ -1.72
PRPF40A-210ENST00000489741 C2orf50Q96LR7 162 aa4.3□□□□□ -1.72
PRPF40A-210ENST00000489741 C20orf85Q9H1P6 137 aa4.3□□□□□ -1.72
PRPF40A-210ENST00000489741 LYRM2Q9NU23 88 aaPredicted RBP4.3□□□□□ -1.72
PRPF40A-210ENST00000489741 PRO0255Q9UI72 69 aa4.3□□□□□ -1.72
PRPF40A-210ENST00000489741 TP53TG3Q9ULZ0 132 aa4.3□□□□□ -1.72
PRPF40A-210ENST00000489741 FUT9Q9Y231 359 aa4.3□□□□□ -1.72
PRPF40A-210ENST00000489741 IGSF23A1L1A6 192 aa4.29□□□□□ -1.72
PRPF40A-210ENST00000489741 EPM2AB3EWF7 344 aa4.29□□□□□ -1.72
PRPF40A-210ENST00000489741 L7N2F9 121 aa4.29□□□□□ -1.72
PRPF40A-210ENST00000489741 NXPH4O95158 308 aa4.29□□□□□ -1.72
PRPF40A-210ENST00000489741 TCRBP04435 133 aa4.29□□□□□ -1.72
PRPF40A-210ENST00000489741 PYYP10082 97 aa4.29□□□□□ -1.72
PRPF40A-210ENST00000489741 IL7P13232 177 aa4.29□□□□□ -1.72
PRPF40A-210ENST00000489741 RNASE4P34096 147 aaKnown RBP4.29□□□□□ -1.72
PRPF40A-210ENST00000489741 INPP1P49441 399 aa4.29□□□□□ -1.72
PRPF40A-210ENST00000489741 SULT1A1P50225 295 aa4.29□□□□□ -1.72
PRPF40A-210ENST00000489741 CAV2P51636 162 aa4.29□□□□□ -1.72
PRPF40A-210ENST00000489741 VAMP2P63027 116 aa4.29□□□□□ -1.72
PRPF40A-210ENST00000489741 SLAQ13239 276 aa4.29□□□□□ -1.72
PRPF40A-210ENST00000489741 ATP6V1FQ16864 119 aa4.29□□□□□ -1.72
PRPF40A-210ENST00000489741 GCSAMLQ5JQS6 135 aa4.29□□□□□ -1.72
PRPF40A-210ENST00000489741 EXOC3-AS1Q8N2X6 119 aa4.29□□□□□ -1.72
PRPF40A-210ENST00000489741 VGLL1Q99990 258 aa4.29□□□□□ -1.72
PRPF40A-210ENST00000489741 MRPL32Q9BYC8 188 aaKnown RBP4.29□□□□□ -1.72
PRPF40A-210ENST00000489741 ZNF492Q9P255 531 aa4.29□□□□□ -1.72
PRPF40A-210ENST00000489741 HHLA3Q9XRX5 114 aa4.29□□□□□ -1.72
PRPF40A-210ENST00000489741 LSM5Q9Y4Y9 91 aaKnown RBP4.29□□□□□ -1.72
PRPF40A-210ENST00000489741 ICOSQ9Y6W8 199 aa4.29□□□□□ -1.72
PRPF40A-210ENST00000489741 FLG2Q5D862 2391 aaPredicted RBP4.29□□□□□ -1.72
PRPF40A-210ENST00000489741 IGHV1OR15-1A0A075B7D0 117 aa4.28□□□□□ -1.72
PRPF40A-210ENST00000489741 A0A087WTM6 91 aa4.28□□□□□ -1.72
PRPF40A-210ENST00000489741 CCDC160A6NGH7 325 aa4.28□□□□□ -1.72
PRPF40A-210ENST00000489741 K7EP13 123 aa4.28□□□□□ -1.72
PRPF40A-210ENST00000489741 LYRM1O43325 122 aa4.28□□□□□ -1.72
PRPF40A-210ENST00000489741 PRAF2O60831 178 aa4.28□□□□□ -1.72
PRPF40A-210ENST00000489741 GPX1P07203 203 aa4.28□□□□□ -1.72
PRPF40A-210ENST00000489741 NBEAP1P0C6P0 100 aa4.28□□□□□ -1.72
PRPF40A-210ENST00000489741 FUSP35637 526 aaKnown RBP eCLIP4.28□□□□□ -1.72
PRPF40A-210ENST00000489741 BCAP31P51572 246 aa4.28□□□□□ -1.72
PRPF40A-210ENST00000489741 KRTAP10-1P60331 282 aa4.28□□□□□ -1.72
PRPF40A-210ENST00000489741 ZNF846Q147U1 533 aa4.28□□□□□ -1.72
PRPF40A-210ENST00000489741 MRPL23Q16540 153 aaKnown RBP4.28□□□□□ -1.72
PRPF40A-210ENST00000489741 NFE4Q86UQ8 179 aa4.28□□□□□ -1.72
PRPF40A-210ENST00000489741 RASL10AQ92737 203 aa4.28□□□□□ -1.72
PRPF40A-210ENST00000489741 SEC22CQ9BRL7 303 aa4.28□□□□□ -1.72
PRPF40A-210ENST00000489741 SLC25A2Q9BXI2 301 aa4.28□□□□□ -1.72
PRPF40A-210ENST00000489741 NPCDR1Q9BY65 106 aa4.28□□□□□ -1.72
PRPF40A-210ENST00000489741 TIMM9Q9Y5J7 89 aa4.28□□□□□ -1.72
PRPF40A-210ENST00000489741 IGKV2-40A0A087WW87 121 aaPredicted RBP4.27□□□□□ -1.73
PRPF40A-210ENST00000489741 UBE2L5PA0A1B0GUS4 154 aa4.27□□□□□ -1.73
PRPF40A-210ENST00000489741 C5orf51A6NDU8 294 aa4.27□□□□□ -1.73
PRPF40A-210ENST00000489741 FAM25EA8MYX2 175 aa4.27□□□□□ -1.73
PRPF40A-210ENST00000489741 K7EQD1 137 aa4.27□□□□□ -1.73
PRPF40A-210ENST00000489741 IGKV2D-40P01614 121 aaPredicted RBP4.27□□□□□ -1.73
PRPF40A-210ENST00000489741 IGHV3-53P01767 116 aa4.27□□□□□ -1.73
PRPF40A-210ENST00000489741 DNAH10OSP0CZ25 163 aa4.27□□□□□ -1.73
PRPF40A-210ENST00000489741 INAFM2P0DMQ5 153 aa4.27□□□□□ -1.73
PRPF40A-210ENST00000489741 FGF7P21781 194 aa4.27□□□□□ -1.73
PRPF40A-210ENST00000489741 HBG1P69891 147 aa4.27□□□□□ -1.73
PRPF40A-210ENST00000489741 HBG2P69892 147 aa4.27□□□□□ -1.73
PRPF40A-210ENST00000489741 BAXQ07812 192 aa4.27□□□□□ -1.73
PRPF40A-210ENST00000489741 ZNF266Q14584 549 aa4.27□□□□□ -1.73
PRPF40A-210ENST00000489741 TMEM78Q5T7P6 136 aa4.27□□□□□ -1.73
PRPF40A-210ENST00000489741 Q6AWC8 147 aa4.27□□□□□ -1.73
PRPF40A-210ENST00000489741 NEGR1Q7Z3B1 354 aa4.27□□□□□ -1.73
PRPF40A-210ENST00000489741 OR10G4Q8NGN3 311 aa4.27□□□□□ -1.73
PRPF40A-210ENST00000489741 BLNKQ8WV28 456 aa4.27□□□□□ -1.73
PRPF40A-210ENST00000489741 FXYD5Q96DB9 178 aa4.27□□□□□ -1.73
PRPF40A-210ENST00000489741 MRPL16Q9NX20 251 aaKnown RBP4.27□□□□□ -1.73
PRPF40A-210ENST00000489741 DNAH8Q96JB1 4490 aa4.27□□□□□ -1.73
PRPF40A-210ENST00000489741 TRAV6A0A075B6T7 132 aa4.26□□□□□ -1.73
PRPF40A-210ENST00000489741 TRAV9-2A0A087WT02 112 aa4.26□□□□□ -1.73
PRPF40A-210ENST00000489741 RBAKDNA6NC62 111 aa4.26□□□□□ -1.73
PRPF40A-210ENST00000489741 LRCOL1A6NCL2 159 aa4.26□□□□□ -1.73
PRPF40A-210ENST00000489741 PVALBP20472 110 aaPredicted RBP4.26□□□□□ -1.73
PRPF40A-210ENST00000489741 ZNF138P52744 262 aa4.26□□□□□ -1.73
PRPF40A-210ENST00000489741 TDRG1Q3Y452 100 aa4.26□□□□□ -1.73
PRPF40A-210ENST00000489741 Q5VSD8 79 aa4.26□□□□□ -1.73
PRPF40A-210ENST00000489741 MIR17HGQ75NE6 70 aa4.26□□□□□ -1.73
PRPF40A-210ENST00000489741 STX12Q86Y82 276 aa4.26□□□□□ -1.73
PRPF40A-210ENST00000489741 SPXQ9BT56 116 aa4.26□□□□□ -1.73
PRPF40A-210ENST00000489741 OR51M1Q9H341 326 aa4.26□□□□□ -1.73
PRPF40A-210ENST00000489741 NUDT15Q9NV35 164 aa4.26□□□□□ -1.73
PRPF40A-210ENST00000489741 LENEPQ9Y5L5 61 aa4.26□□□□□ -1.73
PRPF40A-210ENST00000489741 LY96Q9Y6Y9 160 aa4.26□□□□□ -1.73
PRPF40A-210ENST00000489741 E5RGE8 158 aa4.25□□□□□ -1.73
PRPF40A-210ENST00000489741 ORM1P02763 201 aa4.25□□□□□ -1.73
PRPF40A-210ENST00000489741 SFTA3P0C7M3 94 aa4.25□□□□□ -1.73
PRPF40A-210ENST00000489741 S100A10P60903 97 aa4.25□□□□□ -1.73
PRPF40A-210ENST00000489741 ZNF415Q09FC8 603 aa4.25□□□□□ -1.73
PRPF40A-210ENST00000489741 WFDC10BQ8IUB3 73 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms