RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 GAGE7O76087 117 aa10.22□□□□□ -0.77
HLA-F-229ENST00000489502 GAGE12FP0CL80 117 aa10.22□□□□□ -0.77
HLA-F-229ENST00000489502 GAGE12GP0CL81 117 aa10.22□□□□□ -0.77
HLA-F-229ENST00000489502 GAGE12IP0CL82 117 aa10.22□□□□□ -0.77
HLA-F-229ENST00000489502 TDRG1Q3Y452 100 aa10.22□□□□□ -0.77
HLA-F-229ENST00000489502 TOR2AQ5JU69 321 aa10.22□□□□□ -0.77
HLA-F-229ENST00000489502 IBA57Q5T440 356 aaKnown RBP10.22□□□□□ -0.77
HLA-F-229ENST00000489502 SDF2L1Q9HCN8 221 aa10.22□□□□□ -0.77
HLA-F-229ENST00000489502 MRPL16Q9NX20 251 aaKnown RBP10.22□□□□□ -0.77
HLA-F-229ENST00000489502 MDFICQ9P1T7 246 aa10.22□□□□□ -0.77
HLA-F-229ENST00000489502 ZFP30Q9Y2G7 519 aa10.22□□□□□ -0.77
HLA-F-229ENST00000489502 TRGV1A0A0A0MS02 117 aa10.21□□□□□ -0.77
HLA-F-229ENST00000489502 GNRH2O43555 120 aa10.21□□□□□ -0.77
HLA-F-229ENST00000489502 PDE6DO43924 150 aa10.21□□□□□ -0.77
HLA-F-229ENST00000489502 SH2D1AO60880 128 aa10.21□□□□□ -0.77
HLA-F-229ENST00000489502 CRIP1P50238 77 aa10.21□□□□□ -0.77
HLA-F-229ENST00000489502 DAZ2Q13117 558 aaKnown RBP10.21□□□□□ -0.77
HLA-F-229ENST00000489502 CENPWQ5EE01 88 aa10.21□□□□□ -0.77
HLA-F-229ENST00000489502 BAGE2Q86Y30 109 aa10.21□□□□□ -0.77
HLA-F-229ENST00000489502 LINC00612Q8N6U2 182 aa10.21□□□□□ -0.77
HLA-F-229ENST00000489502 MED9Q9NWA0 146 aa10.21□□□□□ -0.77
HLA-F-229ENST00000489502 KLK5Q9Y337 293 aaPredicted RBP10.21□□□□□ -0.77
HLA-F-229ENST00000489502 PLECQ15149 4684 aaKnown RBP10.21□□□□□ -0.78
HLA-F-229ENST00000489502 IGHV3-16A0A0C4DH30 117 aa10.2□□□□□ -0.78
HLA-F-229ENST00000489502 RBFOX3A6NFN3 312 aa10.2□□□□□ -0.78
HLA-F-229ENST00000489502 M0R036 132 aa10.2□□□□□ -0.78
HLA-F-229ENST00000489502 S100A9P06702 114 aaKnown RBP10.2□□□□□ -0.78
HLA-F-229ENST00000489502 TAGLN2P37802 199 aaKnown RBP10.2□□□□□ -0.78
HLA-F-229ENST00000489502 ZNF506Q5JVG8 444 aa10.2□□□□□ -0.78
HLA-F-229ENST00000489502 COX8CQ7Z4L0 72 aa10.2□□□□□ -0.78
HLA-F-229ENST00000489502 ALMS1Q8TCU4 4167 aa10.19□□□□□ -0.78
HLA-F-229ENST00000489502 RAB19A4D1S5 217 aa10.19□□□□□ -0.78
HLA-F-229ENST00000489502 IGLL5B9A064 214 aa10.19□□□□□ -0.78
HLA-F-229ENST00000489502 SPINK4O60575 86 aa10.19□□□□□ -0.78
HLA-F-229ENST00000489502 FAM162BQ5T6X4 162 aa10.19□□□□□ -0.78
HLA-F-229ENST00000489502 PRR27Q6MZM9 219 aa10.19□□□□□ -0.78
HLA-F-229ENST00000489502 KCNS1Q96KK3 526 aa10.19□□□□□ -0.78
HLA-F-229ENST00000489502 KMT2CQ8NEZ4 4911 aaKnown RBP10.19□□□□□ -0.78
HLA-F-229ENST00000489502 TRBV20OR9-2A0A075B6H5 130 aa10.18□□□□□ -0.78
HLA-F-229ENST00000489502 TMSB15BA0A087X1C1 80 aa10.18□□□□□ -0.78
HLA-F-229ENST00000489502 IGKV3D-20A0A0C4DH25 116 aa10.18□□□□□ -0.78
HLA-F-229ENST00000489502 PGPEP1LA6NFU8 196 aa10.18□□□□□ -0.78
HLA-F-229ENST00000489502 FABP5P3A8MUU1 101 aa10.18□□□□□ -0.78
HLA-F-229ENST00000489502 ORM1P02763 201 aa10.18□□□□□ -0.78
HLA-F-229ENST00000489502 ATP5G1P05496 136 aa10.18□□□□□ -0.78
HLA-F-229ENST00000489502 ZNF674Q2M3X9 581 aa10.18□□□□□ -0.78
HLA-F-229ENST00000489502 FAM210AQ96ND0 272 aa10.18□□□□□ -0.78
HLA-F-229ENST00000489502 MLST8Q9BVC4 326 aa10.18□□□□□ -0.78
HLA-F-229ENST00000489502 MUC4Q99102 2169 aa10.17□□□□□ -0.78
HLA-F-229ENST00000489502 TRGV2A0A075B6R0 118 aa10.17□□□□□ -0.78
HLA-F-229ENST00000489502 IGHV4-4A0A075B6R2 117 aa10.17□□□□□ -0.78
HLA-F-229ENST00000489502 B4DEV8 164 aa10.17□□□□□ -0.78
HLA-F-229ENST00000489502 GNG4P50150 75 aa10.17□□□□□ -0.78
HLA-F-229ENST00000489502 CEBPGP53567 150 aa10.17□□□□□ -0.78
HLA-F-229ENST00000489502 EIF5A2Q9GZV4 153 aaKnown RBP10.17□□□□□ -0.78
HLA-F-229ENST00000489502 F5H768 121 aa10.16□□□□□ -0.78
HLA-F-229ENST00000489502 IGLV2-8P01709 118 aa10.16□□□□□ -0.78
HLA-F-229ENST00000489502 IGHV3-53P01767 116 aa10.16□□□□□ -0.78
HLA-F-229ENST00000489502 MGST1P10620 155 aaKnown RBP10.16□□□□□ -0.78
HLA-F-229ENST00000489502 RPL19P84098 196 aaKnown RBP10.16□□□□□ -0.78
HLA-F-229ENST00000489502 TMEM88Q6PEY1 159 aa10.16□□□□□ -0.78
HLA-F-229ENST00000489502 GRIFINA4D1Z8 144 aa10.15□□□□□ -0.78
HLA-F-229ENST00000489502 KRBOX1C9JBD0 128 aa10.15□□□□□ -0.78
HLA-F-229ENST00000489502 TMEM250H0YL14 139 aa10.15□□□□□ -0.78
HLA-F-229ENST00000489502 H3BVH4 76 aa10.15□□□□□ -0.78
HLA-F-229ENST00000489502 RNASE3P12724 160 aaKnown RBP10.15□□□□□ -0.78
HLA-F-229ENST00000489502 ASIPP42127 132 aa10.15□□□□□ -0.78
HLA-F-229ENST00000489502 LINC01559Q495D7 138 aa10.15□□□□□ -0.78
HLA-F-229ENST00000489502 C9orf85Q96MD7 179 aa10.15□□□□□ -0.78
HLA-F-229ENST00000489502 SPXQ9BT56 116 aa10.15□□□□□ -0.78
HLA-F-229ENST00000489502 PARLQ9H300 379 aa10.15□□□□□ -0.78
HLA-F-229ENST00000489502 DNAH1Q9P2D7 4330 aa10.15□□□□□ -0.79
HLA-F-229ENST00000489502 M0R2P5 195 aa10.14□□□□□ -0.79
HLA-F-229ENST00000489502 HOXA5P20719 270 aa10.14□□□□□ -0.79
HLA-F-229ENST00000489502 S100A4P26447 101 aaKnown RBP10.14□□□□□ -0.79
HLA-F-229ENST00000489502 OR5I1Q13606 314 aa10.14□□□□□ -0.79
HLA-F-229ENST00000489502 LGALS9BQ3B8N2 356 aa10.14□□□□□ -0.79
HLA-F-229ENST00000489502 APLNQ9ULZ1 77 aa10.14□□□□□ -0.79
HLA-F-229ENST00000489502 SACSQ9NZJ4 4579 aa10.14□□□□□ -0.79
HLA-F-229ENST00000489502 LCE6AA0A183 80 aa10.13□□□□□ -0.79
HLA-F-229ENST00000489502 C9JCJ5 164 aa10.13□□□□□ -0.79
HLA-F-229ENST00000489502 SRP19P09132 144 aaKnown RBP10.13□□□□□ -0.79
HLA-F-229ENST00000489502 SFTA3P0C7M3 94 aa10.13□□□□□ -0.79
HLA-F-229ENST00000489502 NACAE9PAV3 2078 aa10.13□□□□□ -0.79
HLA-F-229ENST00000489502 SRSF3P84103 164 aaKnown RBP10.12□□□□□ -0.79
HLA-F-229ENST00000489502 IFITM2Q01629 132 aa10.12□□□□□ -0.79
HLA-F-229ENST00000489502 LINC00476Q8WZB0 136 aa10.12□□□□□ -0.79
HLA-F-229ENST00000489502 C18orf15Q96N68 181 aa10.12□□□□□ -0.79
HLA-F-229ENST00000489502 LYSTQ99698 3801 aa10.12□□□□□ -0.79
HLA-F-229ENST00000489502 NDUFAF3Q9BU61 184 aa10.12□□□□□ -0.79
HLA-F-229ENST00000489502 A0A0J9YY99 117 aa10.11□□□□□ -0.79
HLA-F-229ENST00000489502 C9JQL5 133 aa10.11□□□□□ -0.79
HLA-F-229ENST00000489502 K7EN84 100 aa10.11□□□□□ -0.79
HLA-F-229ENST00000489502 ZNF876PQ49A33 203 aa10.11□□□□□ -0.79
HLA-F-229ENST00000489502 ZNF575Q86XF7 245 aa10.11□□□□□ -0.79
HLA-F-229ENST00000489502 RASL10AQ92737 203 aa10.11□□□□□ -0.79
HLA-F-229ENST00000489502 SMIM12Q96EX1 92 aa10.11□□□□□ -0.79
HLA-F-229ENST00000489502 ZNF479Q96JC4 524 aa10.11□□□□□ -0.79
HLA-F-229ENST00000489502 TRAV26-1A0A087WT03 109 aa10.1□□□□□ -0.79
HLA-F-229ENST00000489502 ARMS2P0C7Q2 107 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms