RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 RAB3DO95716 219 aa7.1□□□□□ -1.27
HDAC6-233ENST00000489352 ANGP03950 147 aaKnown RBP7.1□□□□□ -1.27
HDAC6-233ENST00000489352 ANXA3P12429 323 aa7.1□□□□□ -1.27
HDAC6-233ENST00000489352 ZNF266Q14584 549 aa7.1□□□□□ -1.27
HDAC6-233ENST00000489352 MIAQ16674 131 aa7.1□□□□□ -1.27
HDAC6-233ENST00000489352 PRR26Q8N8Z3 221 aa7.1□□□□□ -1.27
HDAC6-233ENST00000489352 DIRC3C9JPN6 131 aa7.09□□□□□ -1.27
HDAC6-233ENST00000489352 SRPXP78539 464 aa7.09□□□□□ -1.27
HDAC6-233ENST00000489352 EXOC3-AS1Q8N2X6 119 aa7.09□□□□□ -1.27
HDAC6-233ENST00000489352 GPN1Q9HCN4 374 aaPredicted RBP7.09□□□□□ -1.27
HDAC6-233ENST00000489352 MGAT4CQ9UBM8 478 aa7.09□□□□□ -1.27
HDAC6-233ENST00000489352 K7EPK0 472 aa7.08□□□□□ -1.28
HDAC6-233ENST00000489352 HOXB5P09067 269 aa7.08□□□□□ -1.28
HDAC6-233ENST00000489352 COX6A2Q02221 97 aa7.08□□□□□ -1.28
HDAC6-233ENST00000489352 Q6AWC8 147 aa7.08□□□□□ -1.28
HDAC6-233ENST00000489352 Q6ZRG5 221 aa7.08□□□□□ -1.28
HDAC6-233ENST00000489352 C12orf45Q8N5I9 185 aaPredicted RBP7.08□□□□□ -1.28
HDAC6-233ENST00000489352 OR2T35Q8NGX2 323 aa7.08□□□□□ -1.28
HDAC6-233ENST00000489352 SDF2L1Q9HCN8 221 aa7.08□□□□□ -1.28
HDAC6-233ENST00000489352 NDUFA13Q9P0J0 144 aa7.08□□□□□ -1.28
HDAC6-233ENST00000489352 TAS2R19P59542 299 aa7.07□□□□□ -1.28
HDAC6-233ENST00000489352 PDE6HQ13956 83 aa7.07□□□□□ -1.28
HDAC6-233ENST00000489352 KCNS1Q96KK3 526 aa7.07□□□□□ -1.28
HDAC6-233ENST00000489352 CCDC59Q9P031 241 aaKnown RBP7.07□□□□□ -1.28
HDAC6-233ENST00000489352 MUC21A0A0G2JKD1 596 aa7.06□□□□□ -1.28
HDAC6-233ENST00000489352 DISC1C4P0D8 188 aa7.06□□□□□ -1.28
HDAC6-233ENST00000489352 NDUFS6O75380 124 aaKnown RBP7.06□□□□□ -1.28
HDAC6-233ENST00000489352 TMEM229BQ8NBD8 167 aa7.06□□□□□ -1.28
HDAC6-233ENST00000489352 OR1L4Q8NGR5 311 aa7.06□□□□□ -1.28
HDAC6-233ENST00000489352 OR2G3Q8NGZ4 309 aa7.06□□□□□ -1.28
HDAC6-233ENST00000489352 SOSTQ9BQB4 213 aa7.06□□□□□ -1.28
HDAC6-233ENST00000489352 COMMD3Q9UBI1 195 aa7.06□□□□□ -1.28
HDAC6-233ENST00000489352 GPR132Q9UNW8 380 aa7.06□□□□□ -1.28
HDAC6-233ENST00000489352 A6NHS1 94 aa7.05□□□□□ -1.28
HDAC6-233ENST00000489352 NDUFB4O95168 129 aa7.05□□□□□ -1.28
HDAC6-233ENST00000489352 APOA1P02647 267 aa7.05□□□□□ -1.28
HDAC6-233ENST00000489352 TYMSP04818 313 aa7.05□□□□□ -1.28
HDAC6-233ENST00000489352 LINC00694P0DN24 101 aa7.05□□□□□ -1.28
HDAC6-233ENST00000489352 CSN1S1P47710 185 aa7.05□□□□□ -1.28
HDAC6-233ENST00000489352 NEDD8Q15843 81 aa7.05□□□□□ -1.28
HDAC6-233ENST00000489352 PFDN5Q99471 154 aa7.05□□□□□ -1.28
HDAC6-233ENST00000489352 SAMD10Q9BYL1 202 aa7.05□□□□□ -1.28
HDAC6-233ENST00000489352 PSENENQ9NZ42 101 aa7.05□□□□□ -1.28
HDAC6-233ENST00000489352 TRAV1-1A0A0B4J248 108 aa7.04□□□□□ -1.28
HDAC6-233ENST00000489352 DUXBA0A1W2PPF3 345 aa7.04□□□□□ -1.28
HDAC6-233ENST00000489352 FNDC10F2Z333 226 aa7.04□□□□□ -1.28
HDAC6-233ENST00000489352 CTDSPLO15194 276 aa7.04□□□□□ -1.28
HDAC6-233ENST00000489352 NOL3O60936 208 aaKnown RBP7.04□□□□□ -1.28
HDAC6-233ENST00000489352 SLC25A6P12236 298 aa7.04□□□□□ -1.28
HDAC6-233ENST00000489352 FAAP20Q6NZ36 180 aa7.04□□□□□ -1.28
HDAC6-233ENST00000489352 ASB13Q8WXK3 278 aa7.04□□□□□ -1.28
HDAC6-233ENST00000489352 SCGB3A2Q96PL1 93 aa7.04□□□□□ -1.28
HDAC6-233ENST00000489352 MTFP1Q9UDX5 166 aa7.04□□□□□ -1.28
HDAC6-233ENST00000489352 A0A087WWL8 130 aa7.03□□□□□ -1.28
HDAC6-233ENST00000489352 TRAV21A0A0B4J279 112 aa7.03□□□□□ -1.28
HDAC6-233ENST00000489352 CAV2P51636 162 aa7.03□□□□□ -1.28
HDAC6-233ENST00000489352 ZFP2Q6ZN57 461 aa7.03□□□□□ -1.28
HDAC6-233ENST00000489352 INO80EQ8NBZ0 244 aaPredicted RBP7.03□□□□□ -1.28
HDAC6-233ENST00000489352 TRIM63Q969Q1 353 aa7.03□□□□□ -1.28
HDAC6-233ENST00000489352 LINC00474Q9P2X8 69 aa7.03□□□□□ -1.28
HDAC6-233ENST00000489352 CCDC160A6NGH7 325 aa7.02□□□□□ -1.29
HDAC6-233ENST00000489352 FAM25AB3EWG3 89 aa7.02□□□□□ -1.29
HDAC6-233ENST00000489352 FAM25CB3EWG5 89 aa7.02□□□□□ -1.29
HDAC6-233ENST00000489352 FAM25GB3EWG6 89 aa7.02□□□□□ -1.29
HDAC6-233ENST00000489352 RPS19P39019 145 aaKnown RBP7.02□□□□□ -1.29
HDAC6-233ENST00000489352 UBE2D1P51668 147 aa7.02□□□□□ -1.29
HDAC6-233ENST00000489352 MPV17L2Q567V2 206 aa7.02□□□□□ -1.29
HDAC6-233ENST00000489352 ZNF506Q5JVG8 444 aa7.02□□□□□ -1.29
HDAC6-233ENST00000489352 CLPSL2Q6UWE3 100 aa7.02□□□□□ -1.29
HDAC6-233ENST00000489352 PRSS3P2Q8NHM4 247 aa7.02□□□□□ -1.29
HDAC6-233ENST00000489352 CDIP1Q9H305 208 aa7.02□□□□□ -1.29
HDAC6-233ENST00000489352 TMEM14CQ9P0S9 112 aa7.02□□□□□ -1.29
HDAC6-233ENST00000489352 Q9UF83 564 aa7.02□□□□□ -1.29
HDAC6-233ENST00000489352 LENEPQ9Y5L5 61 aa7.02□□□□□ -1.29
HDAC6-233ENST00000489352 IGLV1-50A0A075B6I6 118 aa7.01□□□□□ -1.29
HDAC6-233ENST00000489352 RBAKDNA6NC62 111 aa7.01□□□□□ -1.29
HDAC6-233ENST00000489352 PGPEP1LA6NFU8 196 aa7.01□□□□□ -1.29
HDAC6-233ENST00000489352 A8MWV9 139 aa7.01□□□□□ -1.29
HDAC6-233ENST00000489352 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.01□□□□□ -1.29
HDAC6-233ENST00000489352 SLPIP03973 132 aa7.01□□□□□ -1.29
HDAC6-233ENST00000489352 METTL15P1P0C7V9 234 aa7.01□□□□□ -1.29
HDAC6-233ENST00000489352 PYYP10082 97 aa7.01□□□□□ -1.29
HDAC6-233ENST00000489352 RPS10P46783 165 aaKnown RBP7.01□□□□□ -1.29
HDAC6-233ENST00000489352 CAMLGP49069 296 aa7.01□□□□□ -1.29
HDAC6-233ENST00000489352 PKIAP61925 76 aa7.01□□□□□ -1.29
HDAC6-233ENST00000489352 CLVS1Q8IUQ0 354 aaPredicted RBP7.01□□□□□ -1.29
HDAC6-233ENST00000489352 FER1L6-AS1Q8NA97 138 aa7.01□□□□□ -1.29
HDAC6-233ENST00000489352 DYNC2LI1Q8TCX1 351 aa7.01□□□□□ -1.29
HDAC6-233ENST00000489352 PRRT1Q99946 306 aa7.01□□□□□ -1.29
HDAC6-233ENST00000489352 BCL7BQ9BQE9 202 aa7.01□□□□□ -1.29
HDAC6-233ENST00000489352 RABL2AQ9UBK7 228 aaPredicted RBP7.01□□□□□ -1.29
HDAC6-233ENST00000489352 RSL24D1Q9UHA3 163 aaKnown RBP7.01□□□□□ -1.29
HDAC6-233ENST00000489352 RABL2BQ9UNT1 228 aa7.01□□□□□ -1.29
HDAC6-233ENST00000489352 IGLV10-54A0A075B6I4 117 aa7□□□□□ -1.29
HDAC6-233ENST00000489352 TMBIM6P55061 237 aa7□□□□□ -1.29
HDAC6-233ENST00000489352 LGALSLQ3ZCW2 172 aaPredicted RBP7□□□□□ -1.29
HDAC6-233ENST00000489352 C14orf178Q8N769 122 aaPredicted RBP7□□□□□ -1.29
HDAC6-233ENST00000489352 OR10G7Q8NGN6 311 aa7□□□□□ -1.29
HDAC6-233ENST00000489352 DIRC1Q969H9 104 aa7□□□□□ -1.29
HDAC6-233ENST00000489352 MGST2Q99735 147 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms