RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 TYMSP04818 313 aa10.51□□□□□ -0.73
USP48-210ENST00000489108 OR10J4P0C629 311 aa10.51□□□□□ -0.73
USP48-210ENST00000489108 FGF7P21781 194 aa10.51□□□□□ -0.73
USP48-210ENST00000489108 CSN1S1P47710 185 aa10.51□□□□□ -0.73
USP48-210ENST00000489108 TOR2AQ5JU69 321 aa10.51□□□□□ -0.73
USP48-210ENST00000489108 CFAP126Q5VTH2 177 aa10.51□□□□□ -0.73
USP48-210ENST00000489108 FXYD5Q96DB9 178 aa10.51□□□□□ -0.73
USP48-210ENST00000489108 C5orf51A6NDU8 294 aa10.5□□□□□ -0.73
USP48-210ENST00000489108 CCSO14618 274 aa10.5□□□□□ -0.73
USP48-210ENST00000489108 S100A11P31949 105 aa10.5□□□□□ -0.73
USP48-210ENST00000489108 RANP62826 216 aaKnown RBP10.5□□□□□ -0.73
USP48-210ENST00000489108 DPPA3Q6W0C5 159 aa10.5□□□□□ -0.73
USP48-210ENST00000489108 PAXXQ9BUH6 204 aa10.5□□□□□ -0.73
USP48-210ENST00000489108 C11orf1Q9H5F2 150 aa10.5□□□□□ -0.73
USP48-210ENST00000489108 LENEPQ9Y5L5 61 aa10.5□□□□□ -0.73
USP48-210ENST00000489108 IGKV2D-24A0A075B6R9 120 aa10.49□□□□□ -0.73
USP48-210ENST00000489108 ZNF876PQ49A33 203 aa10.49□□□□□ -0.73
USP48-210ENST00000489108 TNXBP22105 4242 aa10.49□□□□□ -0.73
USP48-210ENST00000489108 DIRC3C9JPN6 131 aa10.48□□□□□ -0.73
USP48-210ENST00000489108 CIDEAO60543 219 aa10.48□□□□□ -0.73
USP48-210ENST00000489108 ASIPP42127 132 aa10.48□□□□□ -0.73
USP48-210ENST00000489108 MITD1Q8WV92 249 aa10.48□□□□□ -0.73
USP48-210ENST00000489108 RMI2Q96E14 147 aa10.48□□□□□ -0.73
USP48-210ENST00000489108 MRPS26Q9BYN8 205 aaKnown RBP10.48□□□□□ -0.73
USP48-210ENST00000489108 TRAV8-1A0A0A6YYK1 113 aa10.47□□□□□ -0.73
USP48-210ENST00000489108 IGSF23A1L1A6 192 aa10.47□□□□□ -0.73
USP48-210ENST00000489108 SULT1A1P50225 295 aa10.47□□□□□ -0.73
USP48-210ENST00000489108 TMBIM6P55061 237 aa10.47□□□□□ -0.73
USP48-210ENST00000489108 TMEM252Q8N6L7 170 aa10.47□□□□□ -0.73
USP48-210ENST00000489108 NPCDR1Q9BY65 106 aa10.47□□□□□ -0.73
USP48-210ENST00000489108 SDF2L1Q9HCN8 221 aa10.47□□□□□ -0.73
USP48-210ENST00000489108 TRAV21A0A0B4J279 112 aa10.46□□□□□ -0.73
USP48-210ENST00000489108 FAM25EA8MYX2 175 aa10.46□□□□□ -0.73
USP48-210ENST00000489108 ATP5SQ99766 215 aa10.46□□□□□ -0.73
USP48-210ENST00000489108 BCL7BQ9BQE9 202 aa10.46□□□□□ -0.73
USP48-210ENST00000489108 GAGE12JA6NER3 117 aa10.45□□□□□ -0.74
USP48-210ENST00000489108 NAP1L6A6NFF2 107 aa10.45□□□□□ -0.74
USP48-210ENST00000489108 MGST1P10620 155 aaKnown RBP10.45□□□□□ -0.74
USP48-210ENST00000489108 INPP1P49441 399 aa10.45□□□□□ -0.74
USP48-210ENST00000489108 HBG1P69891 147 aa10.45□□□□□ -0.74
USP48-210ENST00000489108 HBG2P69892 147 aa10.45□□□□□ -0.74
USP48-210ENST00000489108 GAGE1Q13065 139 aa10.45□□□□□ -0.74
USP48-210ENST00000489108 GAGE4Q13068 117 aa10.45□□□□□ -0.74
USP48-210ENST00000489108 GAGE5Q13069 117 aa10.45□□□□□ -0.74
USP48-210ENST00000489108 ATP6V1FQ16864 119 aa10.45□□□□□ -0.74
USP48-210ENST00000489108 GAGE13Q4V321 117 aa10.45□□□□□ -0.74
USP48-210ENST00000489108 Q6ZRU5 148 aa10.45□□□□□ -0.74
USP48-210ENST00000489108 TMED6Q8WW62 240 aa10.45□□□□□ -0.74
USP48-210ENST00000489108 ASB13Q8WXK3 278 aa10.45□□□□□ -0.74
USP48-210ENST00000489108 KCNS1Q96KK3 526 aa10.45□□□□□ -0.74
USP48-210ENST00000489108 SH3BGRL3Q9H299 93 aa10.45□□□□□ -0.74
USP48-210ENST00000489108 LYRM2Q9NU23 88 aaPredicted RBP10.45□□□□□ -0.74
USP48-210ENST00000489108 RPH3ALQ9UNE2 315 aa10.45□□□□□ -0.74
USP48-210ENST00000489108 F6UZH7 168 aa10.44□□□□□ -0.74
USP48-210ENST00000489108 H3BMQ9 156 aa10.44□□□□□ -0.74
USP48-210ENST00000489108 PVALBP20472 110 aaPredicted RBP10.44□□□□□ -0.74
USP48-210ENST00000489108 TVP23CQ96ET8 276 aa10.44□□□□□ -0.74
USP48-210ENST00000489108 HYLS1Q96M11 299 aa10.44□□□□□ -0.74
USP48-210ENST00000489108 Q9UF83 564 aa10.44□□□□□ -0.74
USP48-210ENST00000489108 KLK12Q9UKR0 248 aa10.44□□□□□ -0.74
USP48-210ENST00000489108 PGPEP1LA6NFU8 196 aa10.43□□□□□ -0.74
USP48-210ENST00000489108 OR7C2O60412 319 aa10.43□□□□□ -0.74
USP48-210ENST00000489108 SPANXN2Q5MJ10 180 aa10.43□□□□□ -0.74
USP48-210ENST00000489108 STX12Q86Y82 276 aa10.43□□□□□ -0.74
USP48-210ENST00000489108 THAP6Q8TBB0 222 aa10.43□□□□□ -0.74
USP48-210ENST00000489108 UBE2WQ96B02 151 aa10.43□□□□□ -0.74
USP48-210ENST00000489108 LINC00694P0DN24 101 aa10.42□□□□□ -0.74
USP48-210ENST00000489108 ZNF506Q5JVG8 444 aa10.42□□□□□ -0.74
USP48-210ENST00000489108 NIT1Q86X76 327 aa10.42□□□□□ -0.74
USP48-210ENST00000489108 CYB561D1Q8N8Q1 229 aa10.42□□□□□ -0.74
USP48-210ENST00000489108 C2orf50Q96LR7 162 aa10.42□□□□□ -0.74
USP48-210ENST00000489108 TREM1Q9NP99 234 aa10.42□□□□□ -0.74
USP48-210ENST00000489108 URGCP-MRPS24S4R325 110 aa10.42□□□□□ -0.74
USP48-210ENST00000489108 A0A087WWC5 75 aa10.41□□□□□ -0.74
USP48-210ENST00000489108 BTCP35070 178 aa10.41□□□□□ -0.74
USP48-210ENST00000489108 S100A10P60903 97 aa10.41□□□□□ -0.74
USP48-210ENST00000489108 SAMD10Q9BYL1 202 aa10.41□□□□□ -0.74
USP48-210ENST00000489108 NMES1Q9C002 83 aa10.41□□□□□ -0.74
USP48-210ENST00000489108 C11orf21Q9P2W6 132 aa10.41□□□□□ -0.74
USP48-210ENST00000489108 PGPA6NDG6 321 aa10.4□□□□□ -0.74
USP48-210ENST00000489108 S100A5P33763 92 aa10.4□□□□□ -0.74
USP48-210ENST00000489108 UBE2L3P68036 154 aaKnown RBP10.4□□□□□ -0.74
USP48-210ENST00000489108 C14orf177Q52M58 125 aa10.4□□□□□ -0.74
USP48-210ENST00000489108 OR2T35Q8NGX2 323 aa10.4□□□□□ -0.74
USP48-210ENST00000489108 C9orf85Q96MD7 179 aa10.4□□□□□ -0.74
USP48-210ENST00000489108 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.4□□□□□ -0.74
USP48-210ENST00000489108 NOL3O60936 208 aaKnown RBP10.39□□□□□ -0.75
USP48-210ENST00000489108 SEC11BP0C7V7 166 aa10.39□□□□□ -0.75
USP48-210ENST00000489108 NHLH2Q02577 135 aa10.39□□□□□ -0.75
USP48-210ENST00000489108 RAB32Q13637 225 aa10.39□□□□□ -0.75
USP48-210ENST00000489108 ATRAIDQ6UW56 229 aa10.39□□□□□ -0.75
USP48-210ENST00000489108 GOLT1AQ6ZVE7 132 aa10.39□□□□□ -0.75
USP48-210ENST00000489108 PTH2Q96A98 100 aa10.39□□□□□ -0.75
USP48-210ENST00000489108 PANO1I0J062 215 aa10.38□□□□□ -0.75
USP48-210ENST00000489108 IL15RAQ13261 267 aa10.38□□□□□ -0.75
USP48-210ENST00000489108 TRIQKQ629K1 86 aa10.38□□□□□ -0.75
USP48-210ENST00000489108 CMTM2Q8TAZ6 248 aa10.38□□□□□ -0.75
USP48-210ENST00000489108 PARLQ9H300 379 aa10.38□□□□□ -0.75
USP48-210ENST00000489108 OTORQ9NRC9 128 aa10.38□□□□□ -0.75
USP48-210ENST00000489108 EIF3GO75821 320 aaKnown RBP eCLIP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms