RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 IGLV2-11P01706 119 aa12.26□□□□□ -0.45
ITGB1-215ENST00000488494 SFTA3P0C7M3 94 aa12.26□□□□□ -0.45
ITGB1-215ENST00000488494 FGF8P55075 233 aaPredicted RBP12.26□□□□□ -0.45
ITGB1-215ENST00000488494 UBE2G2P60604 165 aa12.26□□□□□ -0.45
ITGB1-215ENST00000488494 Q9H8V8 135 aa12.26□□□□□ -0.45
ITGB1-215ENST00000488494 CYTL1Q9NRR1 136 aa12.26□□□□□ -0.45
ITGB1-215ENST00000488494 EPDR1Q9UM22 224 aa12.26□□□□□ -0.45
ITGB1-215ENST00000488494 PSG8Q9UQ74 426 aa12.26□□□□□ -0.45
ITGB1-215ENST00000488494 TRGV4A0A0C4DH28 118 aa12.25□□□□□ -0.45
ITGB1-215ENST00000488494 ZNF80P51504 273 aaPredicted RBP12.25□□□□□ -0.45
ITGB1-215ENST00000488494 CRYBA4P53673 196 aa12.25□□□□□ -0.45
ITGB1-215ENST00000488494 FLI1Q01543 452 aaPredicted RBP12.25□□□□□ -0.45
ITGB1-215ENST00000488494 FHL2Q14192 279 aa12.25□□□□□ -0.45
ITGB1-215ENST00000488494 PRNTQ86SH4 94 aa12.25□□□□□ -0.45
ITGB1-215ENST00000488494 C6orf223Q8N319 242 aa12.25□□□□□ -0.45
ITGB1-215ENST00000488494 TMEM75Q8N9X5 138 aa12.25□□□□□ -0.45
ITGB1-215ENST00000488494 RASL10AQ92737 203 aa12.25□□□□□ -0.45
ITGB1-215ENST00000488494 KRTAP1-5Q9BYS1 174 aa12.25□□□□□ -0.45
ITGB1-215ENST00000488494 A0A1W2PRE2 83 aa12.24□□□□□ -0.45
ITGB1-215ENST00000488494 MAP1LC3B2A6NCE7 125 aa12.24□□□□□ -0.45
ITGB1-215ENST00000488494 M0R2P5 195 aa12.24□□□□□ -0.45
ITGB1-215ENST00000488494 GCGP01275 180 aa12.24□□□□□ -0.45
ITGB1-215ENST00000488494 ZFP69Q49AA0 526 aa12.24□□□□□ -0.45
ITGB1-215ENST00000488494 TTC32Q5I0X7 151 aa12.24□□□□□ -0.45
ITGB1-215ENST00000488494 ZNF479Q96JC4 524 aa12.24□□□□□ -0.45
ITGB1-215ENST00000488494 KCNS1Q96KK3 526 aa12.24□□□□□ -0.45
ITGB1-215ENST00000488494 MAP1LC3BQ9GZQ8 125 aa12.24□□□□□ -0.45
ITGB1-215ENST00000488494 HHLA3Q9XRX5 114 aa12.24□□□□□ -0.45
ITGB1-215ENST00000488494 DYNC1H1Q14204 4646 aaKnown RBP12.23□□□□□ -0.45
ITGB1-215ENST00000488494 IFNA7P01567 189 aa12.23□□□□□ -0.45
ITGB1-215ENST00000488494 PFN1P07737 140 aaKnown RBP12.23□□□□□ -0.45
ITGB1-215ENST00000488494 SLAQ13239 276 aa12.23□□□□□ -0.45
ITGB1-215ENST00000488494 ZNF345Q14585 488 aa12.23□□□□□ -0.45
ITGB1-215ENST00000488494 C11orf21Q9P2W6 132 aa12.23□□□□□ -0.45
ITGB1-215ENST00000488494 DNAH11Q96DT5 4516 aa12.23□□□□□ -0.45
ITGB1-215ENST00000488494 TRAV4A0A0B4J268 109 aa12.22□□□□□ -0.45
ITGB1-215ENST00000488494 TRAV34A0A0B4J273 112 aa12.22□□□□□ -0.45
ITGB1-215ENST00000488494 PEX7O00628 323 aa12.22□□□□□ -0.45
ITGB1-215ENST00000488494 SMUG1Q53HV7 270 aa12.22□□□□□ -0.45
ITGB1-215ENST00000488494 KCNRGQ8N5I3 272 aa12.22□□□□□ -0.45
ITGB1-215ENST00000488494 LINC00479Q96M42 142 aa12.22□□□□□ -0.45
ITGB1-215ENST00000488494 FBLL1A6NHQ2 334 aaKnown RBP12.21□□□□□ -0.45
ITGB1-215ENST00000488494 FAM74A7A6NL05 159 aa12.21□□□□□ -0.45
ITGB1-215ENST00000488494 TNP2Q05952 138 aa12.21□□□□□ -0.45
ITGB1-215ENST00000488494 Q86TA4 180 aa12.21□□□□□ -0.45
ITGB1-215ENST00000488494 NXPH4O95158 308 aa12.2□□□□□ -0.46
ITGB1-215ENST00000488494 FHITP49789 147 aa12.2□□□□□ -0.46
ITGB1-215ENST00000488494 PPT1P50897 306 aa12.2□□□□□ -0.46
ITGB1-215ENST00000488494 MRPL23Q16540 153 aaKnown RBP12.2□□□□□ -0.46
ITGB1-215ENST00000488494 SAPCD1Q5SSQ6 148 aa12.2□□□□□ -0.46
ITGB1-215ENST00000488494 OR4C5Q8NGB2 326 aa12.2□□□□□ -0.46
ITGB1-215ENST00000488494 OR11H4Q8NGC9 324 aa12.2□□□□□ -0.46
ITGB1-215ENST00000488494 PCNPQ8WW12 178 aaKnown RBP12.2□□□□□ -0.46
ITGB1-215ENST00000488494 ARL2-SNX15V9GYD0 113 aa12.2□□□□□ -0.46
ITGB1-215ENST00000488494 GYPEP15421 78 aa12.19□□□□□ -0.46
ITGB1-215ENST00000488494 A0A1W2PPQ1 181 aa12.18□□□□□ -0.46
ITGB1-215ENST00000488494 C9JCJ5 164 aa12.18□□□□□ -0.46
ITGB1-215ENST00000488494 K7EQD1 137 aa12.18□□□□□ -0.46
ITGB1-215ENST00000488494 BCL2L11O43521 198 aa12.18□□□□□ -0.46
ITGB1-215ENST00000488494 SRIP30626 198 aa12.18□□□□□ -0.46
ITGB1-215ENST00000488494 NEGR1Q7Z3B1 354 aa12.18□□□□□ -0.46
ITGB1-215ENST00000488494 NKX6-2Q9C056 277 aaPredicted RBP12.18□□□□□ -0.46
ITGB1-215ENST00000488494 KANTRA0A1W2PQU2 76 aa12.17□□□□□ -0.46
ITGB1-215ENST00000488494 HMSDA8MTL9 139 aa12.17□□□□□ -0.46
ITGB1-215ENST00000488494 SIVA1O15304 175 aa12.17□□□□□ -0.46
ITGB1-215ENST00000488494 ORM1P02763 201 aa12.17□□□□□ -0.46
ITGB1-215ENST00000488494 ZNF876PQ49A33 203 aa12.17□□□□□ -0.46
ITGB1-215ENST00000488494 ZNF575Q86XF7 245 aa12.17□□□□□ -0.46
ITGB1-215ENST00000488494 STOML3Q8TAV4 291 aa12.17□□□□□ -0.46
ITGB1-215ENST00000488494 HIST1H2BAQ96A08 127 aa12.17□□□□□ -0.46
ITGB1-215ENST00000488494 C9orf85Q96MD7 179 aa12.17□□□□□ -0.46
ITGB1-215ENST00000488494 ZNF471Q9BX82 626 aaPredicted RBP12.17□□□□□ -0.46
ITGB1-215ENST00000488494 LYPD5Q6UWN5 251 aa12.16□□□□□ -0.46
ITGB1-215ENST00000488494 FAM213BQ8TBF2 198 aa12.16□□□□□ -0.46
ITGB1-215ENST00000488494 A0A0D9SG52 128 aa12.15□□□□□ -0.46
ITGB1-215ENST00000488494 LOC100131303A0A0U1RQF7 123 aa12.15□□□□□ -0.46
ITGB1-215ENST00000488494 SEC11BP0C7V7 166 aa12.15□□□□□ -0.46
ITGB1-215ENST00000488494 RNASE3P12724 160 aaKnown RBP12.15□□□□□ -0.46
ITGB1-215ENST00000488494 CST9LP1Q5W188 147 aa12.15□□□□□ -0.46
ITGB1-215ENST00000488494 PCLOQ9Y6V0 5065 aa12.14□□□□□ -0.47
ITGB1-215ENST00000488494 A0A1B0GV50 99 aa12.14□□□□□ -0.47
ITGB1-215ENST00000488494 UMAD1C9J7I0 102 aa12.14□□□□□ -0.47
ITGB1-215ENST00000488494 GATA1P15976 413 aaPredicted RBP12.14□□□□□ -0.47
ITGB1-215ENST00000488494 LINC00315P59091 139 aa12.14□□□□□ -0.47
ITGB1-215ENST00000488494 ZNF506Q5JVG8 444 aa12.14□□□□□ -0.47
ITGB1-215ENST00000488494 CFAP126Q5VTH2 177 aa12.14□□□□□ -0.47
ITGB1-215ENST00000488494 DPPA3Q6W0C5 159 aa12.14□□□□□ -0.47
ITGB1-215ENST00000488494 ZC2HC1AQ96GY0 325 aa12.14□□□□□ -0.47
ITGB1-215ENST00000488494 FMC1Q96HJ9 113 aa12.14□□□□□ -0.47
ITGB1-215ENST00000488494 TXNDC17Q9BRA2 123 aa12.14□□□□□ -0.47
ITGB1-215ENST00000488494 TCEAL7Q9BRU2 100 aa12.14□□□□□ -0.47
ITGB1-215ENST00000488494 RYR1P21817 5038 aa12.13□□□□□ -0.47
ITGB1-215ENST00000488494 IGKV3D-20A0A0C4DH25 116 aa12.13□□□□□ -0.47
ITGB1-215ENST00000488494 PFDN1O60925 122 aa12.13□□□□□ -0.47
ITGB1-215ENST00000488494 MED14OSP0DP75 135 aa12.13□□□□□ -0.47
ITGB1-215ENST00000488494 ASIPP42127 132 aa12.13□□□□□ -0.47
ITGB1-215ENST00000488494 UBE2G1P62253 170 aa12.13□□□□□ -0.47
ITGB1-215ENST00000488494 NHLRC2Q8NBF2 726 aa12.13□□□□□ -0.47
ITGB1-215ENST00000488494 SFT2D1Q8WV19 159 aa12.13□□□□□ -0.47
ITGB1-215ENST00000488494 IGHV3-73A0A0B4J1V6 119 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms