RNA–Protein interactions for RNA: ENST00000488250.5

RAPGEF3-211, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-211ENST00000488250 SRD5A1P18405 259 aa12.02□□□□□ -0.49
RAPGEF3-211ENST00000488250 SYNJ2BPP57105 145 aa12.02□□□□□ -0.49
RAPGEF3-211ENST00000488250 OR10AG1Q8NH19 301 aa12.02□□□□□ -0.49
RAPGEF3-211ENST00000488250 ITPR3Q14573 2671 aa12.02□□□□□ -0.49
RAPGEF3-211ENST00000488250 KLLNB2CW77 178 aa12.01□□□□□ -0.49
RAPGEF3-211ENST00000488250 K7EQG2 157 aa12.01□□□□□ -0.49
RAPGEF3-211ENST00000488250 TCF21O43680 179 aa12.01□□□□□ -0.49
RAPGEF3-211ENST00000488250 NPYP01303 97 aa12.01□□□□□ -0.49
RAPGEF3-211ENST00000488250 LBHQ53QV2 105 aaPredicted RBP12.01□□□□□ -0.49
RAPGEF3-211ENST00000488250 ODF3Q96PU9 254 aa12.01□□□□□ -0.49
RAPGEF3-211ENST00000488250 PDZD2O15018 2839 aa12.01□□□□□ -0.49
RAPGEF3-211ENST00000488250 LINC01546A6NGU7 62 aa12.01□□□□□ -0.49
RAPGEF3-211ENST00000488250 LINC00173Q6ZV60 143 aa12.01□□□□□ -0.49
RAPGEF3-211ENST00000488250 KLHDC1Q8N7A1 406 aa12.01□□□□□ -0.49
RAPGEF3-211ENST00000488250 C20orf202A1L168 122 aa12□□□□□ -0.49
RAPGEF3-211ENST00000488250 SPATA45Q537H7 98 aa12□□□□□ -0.49
RAPGEF3-211ENST00000488250 PET117Q6UWS5 81 aa12□□□□□ -0.49
RAPGEF3-211ENST00000488250 SMIM15Q7Z3B0 74 aa12□□□□□ -0.49
RAPGEF3-211ENST00000488250 SPATA12Q7Z6I5 190 aa12□□□□□ -0.49
RAPGEF3-211ENST00000488250 MAP1LC3CQ9BXW4 147 aa12□□□□□ -0.49
RAPGEF3-211ENST00000488250 FLNBO75369 2602 aaKnown RBP12□□□□□ -0.49
RAPGEF3-211ENST00000488250 TRAV9-2A0A087WT02 112 aa11.99□□□□□ -0.49
RAPGEF3-211ENST00000488250 SMKR1H3BMG3 65 aa11.99□□□□□ -0.49
RAPGEF3-211ENST00000488250 SNRPD3P62318 126 aaKnown RBP11.99□□□□□ -0.49
RAPGEF3-211ENST00000488250 DUX5Q96PT3 197 aa11.99□□□□□ -0.49
RAPGEF3-211ENST00000488250 FOXC2Q99958 501 aa11.99□□□□□ -0.49
RAPGEF3-211ENST00000488250 CCDC168Q8NDH2 2452 aa11.99□□□□□ -0.49
RAPGEF3-211ENST00000488250 A0A096LNJ9 63 aa11.99□□□□□ -0.49
RAPGEF3-211ENST00000488250 LOC389332A0A1B0GUA5 103 aa11.99□□□□□ -0.49
RAPGEF3-211ENST00000488250 H3BVH4 76 aa11.99□□□□□ -0.49
RAPGEF3-211ENST00000488250 NCR2O95944 276 aa11.99□□□□□ -0.49
RAPGEF3-211ENST00000488250 RNASE4P34096 147 aaKnown RBP11.99□□□□□ -0.49
RAPGEF3-211ENST00000488250 ASIPP42127 132 aa11.99□□□□□ -0.49
RAPGEF3-211ENST00000488250 SPANXN1Q5VSR9 72 aa11.99□□□□□ -0.49
RAPGEF3-211ENST00000488250 MRPL52Q86TS9 123 aaKnown RBP11.99□□□□□ -0.49
RAPGEF3-211ENST00000488250 WFDC3Q8IUB2 231 aa11.99□□□□□ -0.49
RAPGEF3-211ENST00000488250 DEFB125Q8N687 156 aa11.99□□□□□ -0.49
RAPGEF3-211ENST00000488250 ZNF747Q9BV97 191 aa11.99□□□□□ -0.49
RAPGEF3-211ENST00000488250 MAP1LC3AQ9H492 121 aa11.99□□□□□ -0.49
RAPGEF3-211ENST00000488250 SCRT2Q9NQ03 307 aa11.99□□□□□ -0.49
RAPGEF3-211ENST00000488250 SELENOKQ9Y6D0 94 aa11.99□□□□□ -0.49
RAPGEF3-211ENST00000488250 BAHCC1Q9P281 2608 aa11.98□□□□□ -0.49
RAPGEF3-211ENST00000488250 EVI2AP22794 236 aa11.98□□□□□ -0.49
RAPGEF3-211ENST00000488250 ANXA2RQ3ZCQ2 193 aa11.98□□□□□ -0.49
RAPGEF3-211ENST00000488250 C4orf3Q8WVX3 66 aa11.98□□□□□ -0.49
RAPGEF3-211ENST00000488250 AKAP9Q99996 3911 aa11.98□□□□□ -0.49
RAPGEF3-211ENST00000488250 J3KRW8 73 aa11.98□□□□□ -0.49
RAPGEF3-211ENST00000488250 TNFRSF6BO95407 300 aa11.98□□□□□ -0.49
RAPGEF3-211ENST00000488250 A0A0J9YX75 114 aa11.97□□□□□ -0.49
RAPGEF3-211ENST00000488250 PRSS47A8MTI9 375 aa11.97□□□□□ -0.49
RAPGEF3-211ENST00000488250 KRTAP1-1Q07627 177 aa11.97□□□□□ -0.49
RAPGEF3-211ENST00000488250 PSMG4Q5JS54 123 aa11.97□□□□□ -0.49
RAPGEF3-211ENST00000488250 ZNF705AQ6ZN79 300 aaPredicted RBP11.97□□□□□ -0.49
RAPGEF3-211ENST00000488250 C2orf88Q9BSF0 95 aa11.97□□□□□ -0.49
RAPGEF3-211ENST00000488250 NXT2Q9NPJ8 142 aaKnown RBP11.97□□□□□ -0.49
RAPGEF3-211ENST00000488250 DNAJC9-AS1A6NH13 148 aa11.96□□□□□ -0.49
RAPGEF3-211ENST00000488250 LINC01619G3V211 115 aa11.96□□□□□ -0.49
RAPGEF3-211ENST00000488250 CD5LO43866 347 aa11.96□□□□□ -0.49
RAPGEF3-211ENST00000488250 ZNF688P0C7X2 276 aa11.96□□□□□ -0.49
RAPGEF3-211ENST00000488250 IGLC3P0DOY3 106 aa11.96□□□□□ -0.49
RAPGEF3-211ENST00000488250 LEPP41159 167 aa11.96□□□□□ -0.49
RAPGEF3-211ENST00000488250 KIR3DS1Q14943 382 aa11.96□□□□□ -0.49
RAPGEF3-211ENST00000488250 TCTEX1D4Q5JR98 221 aa11.96□□□□□ -0.49
RAPGEF3-211ENST00000488250 ADAMTSL5Q6ZMM2 481 aa11.96□□□□□ -0.49
RAPGEF3-211ENST00000488250 Q6ZSV7 163 aa11.96□□□□□ -0.49
RAPGEF3-211ENST00000488250 ATOH7Q8N100 152 aa11.96□□□□□ -0.49
RAPGEF3-211ENST00000488250 WFDC12Q8WWY7 111 aa11.96□□□□□ -0.49
RAPGEF3-211ENST00000488250 NOTCH2Q04721 2471 aa11.96□□□□□ -0.5
RAPGEF3-211ENST00000488250 OR4C46A6NHA9 309 aa11.96□□□□□ -0.5
RAPGEF3-211ENST00000488250 GAS8-AS1O95177 125 aa11.96□□□□□ -0.5
RAPGEF3-211ENST00000488250 HBDP02042 147 aa11.96□□□□□ -0.5
RAPGEF3-211ENST00000488250 S100A4P26447 101 aaKnown RBP11.96□□□□□ -0.5
RAPGEF3-211ENST00000488250 LINC01545Q5VT33 79 aa11.96□□□□□ -0.5
RAPGEF3-211ENST00000488250 UQCR10Q9UDW1 63 aa11.96□□□□□ -0.5
RAPGEF3-211ENST00000488250 NXPH4O95158 308 aa11.95□□□□□ -0.5
RAPGEF3-211ENST00000488250 TFPI2P48307 235 aa11.95□□□□□ -0.5
RAPGEF3-211ENST00000488250 C18orf65Q6ZTR6 163 aa11.95□□□□□ -0.5
RAPGEF3-211ENST00000488250 OR2K2Q8NGT1 345 aa11.95□□□□□ -0.5
RAPGEF3-211ENST00000488250 MRAP2Q96G30 205 aa11.95□□□□□ -0.5
RAPGEF3-211ENST00000488250 TRAV2A0A0B4J234 112 aa11.94□□□□□ -0.5
RAPGEF3-211ENST00000488250 RNASE3P12724 160 aaKnown RBP11.94□□□□□ -0.5
RAPGEF3-211ENST00000488250 SLURP1P55000 103 aa11.94□□□□□ -0.5
RAPGEF3-211ENST00000488250 NRACQ8N912 160 aa11.94□□□□□ -0.5
RAPGEF3-211ENST00000488250 ZNF469Q96JG9 3925 aaPredicted RBP11.94□□□□□ -0.5
RAPGEF3-211ENST00000488250 M0R143 59 aa11.94□□□□□ -0.5
RAPGEF3-211ENST00000488250 DUSP14O95147 198 aaKnown RBP11.94□□□□□ -0.5
RAPGEF3-211ENST00000488250 MAJINQ3KP22 176 aa11.94□□□□□ -0.5
RAPGEF3-211ENST00000488250 OR1N2Q8NGR9 330 aa11.94□□□□□ -0.5
RAPGEF3-211ENST00000488250 PEMTQ9UBM1 199 aa11.94□□□□□ -0.5
RAPGEF3-211ENST00000488250 PHLDA3Q9Y5J5 127 aa11.94□□□□□ -0.5
RAPGEF3-211ENST00000488250 C7orf71A4D174 169 aa11.93□□□□□ -0.5
RAPGEF3-211ENST00000488250 GNRH2O43555 120 aa11.93□□□□□ -0.5
RAPGEF3-211ENST00000488250 DEFB136Q30KP8 78 aa11.93□□□□□ -0.5
RAPGEF3-211ENST00000488250 FOXI2Q6ZQN5 318 aa11.93□□□□□ -0.5
RAPGEF3-211ENST00000488250 Q8N8P6 123 aa11.93□□□□□ -0.5
RAPGEF3-211ENST00000488250 OR11H1Q8NG94 326 aa11.93□□□□□ -0.5
RAPGEF3-211ENST00000488250 DPF1Q92782 380 aa11.93□□□□□ -0.5
RAPGEF3-211ENST00000488250 SNHG12Q9BXW3 62 aa11.93□□□□□ -0.5
RAPGEF3-211ENST00000488250 FLNAP21333 2647 aaKnown RBP11.93□□□□□ -0.5
RAPGEF3-211ENST00000488250 IGLV2-18A0A075B6J9 118 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms