RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 TRBV6-1A0A0K0K1D8 114 aa12.12□□□□□ -0.47
SHROOM1-205ENST00000488072 PGPEP1LA6NFU8 196 aa12.12□□□□□ -0.47
SHROOM1-205ENST00000488072 LYRM9A8MSI8 78 aa12.12□□□□□ -0.47
SHROOM1-205ENST00000488072 SNURFLB1AK76 121 aa12.12□□□□□ -0.47
SHROOM1-205ENST00000488072 MEF2BQ02080 365 aaPredicted RBP12.12□□□□□ -0.47
SHROOM1-205ENST00000488072 VAX2Q9UIW0 290 aa12.12□□□□□ -0.47
SHROOM1-205ENST00000488072 KMT2CQ8NEZ4 4911 aaKnown RBP12.12□□□□□ -0.47
SHROOM1-205ENST00000488072 TRAV10A0A0B4J240 114 aa12.11□□□□□ -0.47
SHROOM1-205ENST00000488072 RBFOX3A6NFN3 312 aa12.11□□□□□ -0.47
SHROOM1-205ENST00000488072 IGLL5B9A064 214 aa12.11□□□□□ -0.47
SHROOM1-205ENST00000488072 M0R036 132 aa12.11□□□□□ -0.47
SHROOM1-205ENST00000488072 IFNA1P01562 189 aa12.11□□□□□ -0.47
SHROOM1-205ENST00000488072 IGLV2-8P01709 118 aa12.11□□□□□ -0.47
SHROOM1-205ENST00000488072 PFN1P07737 140 aaKnown RBP12.11□□□□□ -0.47
SHROOM1-205ENST00000488072 TCL1AP56279 114 aa12.11□□□□□ -0.47
SHROOM1-205ENST00000488072 TOR2AQ5JU69 321 aa12.11□□□□□ -0.47
SHROOM1-205ENST00000488072 BAGE2Q86Y30 109 aa12.11□□□□□ -0.47
SHROOM1-205ENST00000488072 LINC00612Q8N6U2 182 aa12.11□□□□□ -0.47
SHROOM1-205ENST00000488072 TCEAL7Q9BRU2 100 aa12.11□□□□□ -0.47
SHROOM1-205ENST00000488072 MED9Q9NWA0 146 aa12.11□□□□□ -0.47
SHROOM1-205ENST00000488072 TENM2Q9NT68 2774 aa12.11□□□□□ -0.47
SHROOM1-205ENST00000488072 TMSB15BA0A087X1C1 80 aa12.1□□□□□ -0.47
SHROOM1-205ENST00000488072 TRGV1A0A0A0MS02 117 aa12.1□□□□□ -0.47
SHROOM1-205ENST00000488072 NUPR2A6NF83 97 aa12.1□□□□□ -0.47
SHROOM1-205ENST00000488072 FBLL1A6NHQ2 334 aaKnown RBP12.1□□□□□ -0.47
SHROOM1-205ENST00000488072 SPINK4O60575 86 aa12.1□□□□□ -0.47
SHROOM1-205ENST00000488072 TDRG1Q3Y452 100 aa12.1□□□□□ -0.47
SHROOM1-205ENST00000488072 MLST8Q9BVC4 326 aa12.1□□□□□ -0.47
SHROOM1-205ENST00000488072 ZFP30Q9Y2G7 519 aa12.1□□□□□ -0.47
SHROOM1-205ENST00000488072 TRBV20OR9-2A0A075B6H5 130 aa12.09□□□□□ -0.47
SHROOM1-205ENST00000488072 GRIFINA4D1Z8 144 aa12.09□□□□□ -0.47
SHROOM1-205ENST00000488072 IGHV3-53P01767 116 aa12.09□□□□□ -0.47
SHROOM1-205ENST00000488072 HOXA5P20719 270 aa12.09□□□□□ -0.47
SHROOM1-205ENST00000488072 RPL19P84098 196 aaKnown RBP12.09□□□□□ -0.47
SHROOM1-205ENST00000488072 SRSF3P84103 164 aaKnown RBP12.09□□□□□ -0.47
SHROOM1-205ENST00000488072 DAZ2Q13117 558 aaKnown RBP12.09□□□□□ -0.47
SHROOM1-205ENST00000488072 CENPWQ5EE01 88 aa12.09□□□□□ -0.47
SHROOM1-205ENST00000488072 ZNF506Q5JVG8 444 aa12.09□□□□□ -0.47
SHROOM1-205ENST00000488072 COX8CQ7Z4L0 72 aa12.09□□□□□ -0.47
SHROOM1-205ENST00000488072 FABP5P3A8MUU1 101 aa12.08□□□□□ -0.48
SHROOM1-205ENST00000488072 C9JQL5 133 aa12.08□□□□□ -0.48
SHROOM1-205ENST00000488072 ORM1P02763 201 aa12.08□□□□□ -0.48
SHROOM1-205ENST00000488072 IFITM2Q01629 132 aa12.08□□□□□ -0.48
SHROOM1-205ENST00000488072 ZNF415Q09FC8 603 aa12.08□□□□□ -0.48
SHROOM1-205ENST00000488072 ZNF674Q2M3X9 581 aa12.08□□□□□ -0.48
SHROOM1-205ENST00000488072 IBA57Q5T440 356 aaKnown RBP12.08□□□□□ -0.48
SHROOM1-205ENST00000488072 PRR27Q6MZM9 219 aa12.08□□□□□ -0.48
SHROOM1-205ENST00000488072 SDF2L1Q9HCN8 221 aa12.08□□□□□ -0.48
SHROOM1-205ENST00000488072 APLNQ9ULZ1 77 aa12.08□□□□□ -0.48
SHROOM1-205ENST00000488072 TRGV11A0A075B6L2 103 aa12.07□□□□□ -0.48
SHROOM1-205ENST00000488072 F5H768 121 aa12.07□□□□□ -0.48
SHROOM1-205ENST00000488072 RNASE3P12724 160 aaKnown RBP12.07□□□□□ -0.48
SHROOM1-205ENST00000488072 CEBPGP53567 150 aa12.07□□□□□ -0.48
SHROOM1-205ENST00000488072 IGHV4-4A0A075B6R2 117 aa12.06□□□□□ -0.48
SHROOM1-205ENST00000488072 KRBOX1C9JBD0 128 aa12.06□□□□□ -0.48
SHROOM1-205ENST00000488072 PDE6DO43924 150 aa12.06□□□□□ -0.48
SHROOM1-205ENST00000488072 FAM162BQ5T6X4 162 aa12.06□□□□□ -0.48
SHROOM1-205ENST00000488072 TMEM88Q6PEY1 159 aa12.06□□□□□ -0.48
SHROOM1-205ENST00000488072 FAM210AQ96ND0 272 aa12.06□□□□□ -0.48
SHROOM1-205ENST00000488072 KLK5Q9Y337 293 aaPredicted RBP12.06□□□□□ -0.48
SHROOM1-205ENST00000488072 LYSTQ99698 3801 aa12.06□□□□□ -0.48
SHROOM1-205ENST00000488072 VPS13DQ5THJ4 4388 aa12.06□□□□□ -0.48
SHROOM1-205ENST00000488072 TEX48A0A1B0GUV7 120 aa12.05□□□□□ -0.48
SHROOM1-205ENST00000488072 B4DEV8 164 aa12.05□□□□□ -0.48
SHROOM1-205ENST00000488072 S100A9P06702 114 aaKnown RBP12.05□□□□□ -0.48
SHROOM1-205ENST00000488072 SFTA3P0C7M3 94 aa12.05□□□□□ -0.48
SHROOM1-205ENST00000488072 MGST1P10620 155 aaKnown RBP12.05□□□□□ -0.48
SHROOM1-205ENST00000488072 OR5I1Q13606 314 aa12.05□□□□□ -0.48
SHROOM1-205ENST00000488072 POM121L12Q8N7R1 296 aa12.05□□□□□ -0.48
SHROOM1-205ENST00000488072 TXNDC17Q9BRA2 123 aa12.05□□□□□ -0.48
SHROOM1-205ENST00000488072 EIF5A2Q9GZV4 153 aaKnown RBP12.05□□□□□ -0.48
SHROOM1-205ENST00000488072 C9JCJ5 164 aa12.04□□□□□ -0.48
SHROOM1-205ENST00000488072 ATP5G1P05496 136 aa12.04□□□□□ -0.48
SHROOM1-205ENST00000488072 SRP19P09132 144 aaKnown RBP12.04□□□□□ -0.48
SHROOM1-205ENST00000488072 KCNS1Q96KK3 526 aa12.04□□□□□ -0.48
SHROOM1-205ENST00000488072 C9orf85Q96MD7 179 aa12.04□□□□□ -0.48
SHROOM1-205ENST00000488072 PARLQ9H300 379 aa12.04□□□□□ -0.48
SHROOM1-205ENST00000488072 TRGV2A0A075B6R0 118 aa12.03□□□□□ -0.48
SHROOM1-205ENST00000488072 A0A0J9YY99 117 aa12.03□□□□□ -0.48
SHROOM1-205ENST00000488072 H3BVH4 76 aa12.03□□□□□ -0.48
SHROOM1-205ENST00000488072 GNG4P50150 75 aa12.03□□□□□ -0.48
SHROOM1-205ENST00000488072 ZNF479Q96JC4 524 aa12.03□□□□□ -0.48
SHROOM1-205ENST00000488072 K7EN84 100 aa12.02□□□□□ -0.49
SHROOM1-205ENST00000488072 GZMBP10144 247 aa12.02□□□□□ -0.49
SHROOM1-205ENST00000488072 LINC01559Q495D7 138 aa12.02□□□□□ -0.49
SHROOM1-205ENST00000488072 OCC1Q8TAD7 63 aa12.02□□□□□ -0.49
SHROOM1-205ENST00000488072 RYR2Q92736 4967 aa12.02□□□□□ -0.49
SHROOM1-205ENST00000488072 HYDINQ4G0P3 5121 aa12.02□□□□□ -0.49
SHROOM1-205ENST00000488072 MUC21A0A0G2JKD1 596 aa12.01□□□□□ -0.49
SHROOM1-205ENST00000488072 MUC21A0A140T8X8 626 aa12.01□□□□□ -0.49
SHROOM1-205ENST00000488072 TAGLN2P37802 199 aaKnown RBP12.01□□□□□ -0.49
SHROOM1-205ENST00000488072 SPXQ9BT56 116 aa12.01□□□□□ -0.49
SHROOM1-205ENST00000488072 JPT2Q9H910 190 aa12.01□□□□□ -0.49
SHROOM1-205ENST00000488072 RYR3Q15413 4870 aa12.01□□□□□ -0.49
SHROOM1-205ENST00000488072 LCE6AA0A183 80 aa12□□□□□ -0.49
SHROOM1-205ENST00000488072 M0R2P5 195 aa12□□□□□ -0.49
SHROOM1-205ENST00000488072 ARMS2P0C7Q2 107 aa12□□□□□ -0.49
SHROOM1-205ENST00000488072 RASL10AQ92737 203 aa12□□□□□ -0.49
SHROOM1-205ENST00000488072 MUC4Q99102 2169 aa12□□□□□ -0.49
SHROOM1-205ENST00000488072 TRAV26-1A0A087WT03 109 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms