RNA–Protein interactions for RNA: ENST00000487880.2

USP48-209, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 524 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-209ENST00000487880 GNG13Q9P2W3 67 aa1.83□□□□□ -2.12
USP48-209ENST00000487880 JPT1Q9UK76 154 aa1.83□□□□□ -2.12
USP48-209ENST00000487880 TRAPPC2LQ9UL33 140 aa1.83□□□□□ -2.12
USP48-209ENST00000487880 HS3ST2Q9Y278 367 aa1.83□□□□□ -2.12
USP48-209ENST00000487880 POLR1DQ9Y2S0 133 aa1.83□□□□□ -2.12
USP48-209ENST00000487880 PLXNA4Q9HCM2 1894 aa1.83□□□□□ -2.12
USP48-209ENST00000487880 TRPM6Q9BX84 2022 aa1.83□□□□□ -2.12
USP48-209ENST00000487880 ATG2BQ96BY7 2078 aa1.82□□□□□ -2.12
USP48-209ENST00000487880 MDFIC2A0A1B0GVS7 189 aa1.82□□□□□ -2.12
USP48-209ENST00000487880 LOC107986453A0A1B0GWG9 222 aa1.82□□□□□ -2.12
USP48-209ENST00000487880 TMEM213A2RRL7 107 aa1.82□□□□□ -2.12
USP48-209ENST00000487880 C7orf71A4D174 169 aa1.82□□□□□ -2.12
USP48-209ENST00000487880 CEBPZOSA8MTT3 80 aa1.82□□□□□ -2.12
USP48-209ENST00000487880 C9JCJ5 164 aa1.82□□□□□ -2.12
USP48-209ENST00000487880 F8W1H4 67 aa1.82□□□□□ -2.12
USP48-209ENST00000487880 NUPR1O60356 82 aa1.82□□□□□ -2.12
USP48-209ENST00000487880 GYPAP02724 150 aa1.82□□□□□ -2.12
USP48-209ENST00000487880 ASAH2BP0C7U1 165 aa1.82□□□□□ -2.12
USP48-209ENST00000487880 C3orf79P0CE67 100 aa1.82□□□□□ -2.12
USP48-209ENST00000487880 CCL1P22362 96 aa1.82□□□□□ -2.12
USP48-209ENST00000487880 OPRM1P35372 400 aa1.82□□□□□ -2.12
USP48-209ENST00000487880 ZNF93P35789 620 aaPredicted RBP1.82□□□□□ -2.12
USP48-209ENST00000487880 SSR2P43308 183 aa1.82□□□□□ -2.12
USP48-209ENST00000487880 DYNLT3P51808 116 aa1.82□□□□□ -2.12
USP48-209ENST00000487880 TCL1AP56279 114 aa1.82□□□□□ -2.12
USP48-209ENST00000487880 PSG9Q00887 426 aa1.82□□□□□ -2.12
USP48-209ENST00000487880 SS18Q15532 418 aa1.82□□□□□ -2.12
USP48-209ENST00000487880 LRRC75BQ2VPJ9 315 aa1.82□□□□□ -2.12
USP48-209ENST00000487880 TMEM97Q5BJF2 176 aa1.82□□□□□ -2.12
USP48-209ENST00000487880 NMSQ5H8A3 153 aa1.82□□□□□ -2.12
USP48-209ENST00000487880 Q6ZS49 121 aa1.82□□□□□ -2.12
USP48-209ENST00000487880 BAGE3Q86Y29 109 aa1.82□□□□□ -2.12
USP48-209ENST00000487880 BAGE2Q86Y30 109 aa1.82□□□□□ -2.12
USP48-209ENST00000487880 SELENOHQ8IZQ5 122 aaKnown RBP1.82□□□□□ -2.12
USP48-209ENST00000487880 LRRC25Q8N386 305 aaPredicted RBP1.82□□□□□ -2.12
USP48-209ENST00000487880 OR8B3Q8NGG8 313 aa1.82□□□□□ -2.12
USP48-209ENST00000487880 OR10AC1Q8NH08 325 aa1.82□□□□□ -2.12
USP48-209ENST00000487880 ATP6V0E2Q8NHE4 81 aa1.82□□□□□ -2.12
USP48-209ENST00000487880 C18orf32Q8TCD1 76 aa1.82□□□□□ -2.12
USP48-209ENST00000487880 ZNF418Q8TF45 676 aaPredicted RBP1.82□□□□□ -2.12
USP48-209ENST00000487880 LSM10Q969L4 123 aaKnown RBP1.82□□□□□ -2.12
USP48-209ENST00000487880 AP1S3Q96PC3 154 aa1.82□□□□□ -2.12
USP48-209ENST00000487880 DERL1Q9BUN8 251 aa1.82□□□□□ -2.12
USP48-209ENST00000487880 WDR61Q9GZS3 305 aaKnown RBP1.82□□□□□ -2.12
USP48-209ENST00000487880 TMEM191AQ9H0A3 160 aa1.82□□□□□ -2.12
USP48-209ENST00000487880 TMEM222Q9H0R3 208 aa1.82□□□□□ -2.12
USP48-209ENST00000487880 HES4Q9HCC6 221 aa1.82□□□□□ -2.12
USP48-209ENST00000487880 RPRMQ9NS64 109 aa1.82□□□□□ -2.12
USP48-209ENST00000487880 SLC39A9Q9NUM3 307 aa1.82□□□□□ -2.12
USP48-209ENST00000487880 IL36BQ9NZH7 164 aa1.82□□□□□ -2.12
USP48-209ENST00000487880 TAAR3PQ9P1P4 343 aa1.82□□□□□ -2.12
USP48-209ENST00000487880 CRCT1Q9UGL9 99 aa1.82□□□□□ -2.12
USP48-209ENST00000487880 NAT8BQ9UHF3 227 aa1.82□□□□□ -2.12
USP48-209ENST00000487880 BOKQ9UMX3 212 aaPredicted RBP1.82□□□□□ -2.12
USP48-209ENST00000487880 WASHC3Q9Y3C0 194 aa1.82□□□□□ -2.12
USP48-209ENST00000487880 HEATR5AQ86XA9 2040 aa1.82□□□□□ -2.12
USP48-209ENST00000487880 COL4A2P08572 1712 aa1.82□□□□□ -2.12
USP48-209ENST00000487880 HELZP42694 1942 aaKnown RBP1.81□□□□□ -2.12
USP48-209ENST00000487880 DENND4CQ5VZ89 1909 aa1.81□□□□□ -2.12
USP48-209ENST00000487880 FAM24AA6NFZ4 105 aa1.81□□□□□ -2.12
USP48-209ENST00000487880 OR2T8A6NH00 312 aa1.81□□□□□ -2.12
USP48-209ENST00000487880 H7C1C5 153 aa1.81□□□□□ -2.12
USP48-209ENST00000487880 GNG7O60262 68 aa1.81□□□□□ -2.12
USP48-209ENST00000487880 CCR2P41597 374 aa1.81□□□□□ -2.12
USP48-209ENST00000487880 TCTAP57738 103 aa1.81□□□□□ -2.12
USP48-209ENST00000487880 KRTDAPP60985 99 aa1.81□□□□□ -2.12
USP48-209ENST00000487880 UBE2G1P62253 170 aa1.81□□□□□ -2.12
USP48-209ENST00000487880 RPS24P62847 133 aaKnown RBP1.81□□□□□ -2.12
USP48-209ENST00000487880 ZNF90Q03938 601 aa1.81□□□□□ -2.12
USP48-209ENST00000487880 LTC4SQ16873 150 aa1.81□□□□□ -2.12
USP48-209ENST00000487880 CCSMST1Q4G0I0 132 aa1.81□□□□□ -2.12
USP48-209ENST00000487880 TIMM23BQ5SRD1 257 aa1.81□□□□□ -2.12
USP48-209ENST00000487880 FAM78BQ5VT40 261 aa1.81□□□□□ -2.12
USP48-209ENST00000487880 TMEM42Q69YG0 159 aa1.81□□□□□ -2.12
USP48-209ENST00000487880 EBLN2Q6P2I7 272 aa1.81□□□□□ -2.12
USP48-209ENST00000487880 GLIPR1L1Q6UWM5 242 aa1.81□□□□□ -2.12
USP48-209ENST00000487880 SDIM1Q6ZPB5 146 aa1.81□□□□□ -2.12
USP48-209ENST00000487880 SPATA12Q7Z6I5 190 aa1.81□□□□□ -2.12
USP48-209ENST00000487880 DOLPP1Q86YN1 238 aa1.81□□□□□ -2.12
USP48-209ENST00000487880 BOD1L2Q8IYS8 172 aa1.81□□□□□ -2.12
USP48-209ENST00000487880 OR8I2Q8N0Y5 310 aa1.81□□□□□ -2.12
USP48-209ENST00000487880 TTC9CQ8N5M4 171 aa1.81□□□□□ -2.12
USP48-209ENST00000487880 ZNF439Q8NDP4 499 aa1.81□□□□□ -2.12
USP48-209ENST00000487880 OR4X2Q8NGF9 303 aa1.81□□□□□ -2.12
USP48-209ENST00000487880 VSTM2AQ8TAG5 236 aa1.81□□□□□ -2.12
USP48-209ENST00000487880 PP6455Q8WZ26 134 aa1.81□□□□□ -2.12
USP48-209ENST00000487880 CHCHD1Q96BP2 118 aaKnown RBP1.81□□□□□ -2.12
USP48-209ENST00000487880 GALMQ96C23 342 aa1.81□□□□□ -2.12
USP48-209ENST00000487880 TMEM70Q9BUB7 260 aa1.81□□□□□ -2.12
USP48-209ENST00000487880 PECRQ9BY49 303 aa1.81□□□□□ -2.12
USP48-209ENST00000487880 TTTY10Q9BZA0 68 aa1.81□□□□□ -2.12
USP48-209ENST00000487880 TMEM133Q9H2Q1 129 aa1.81□□□□□ -2.12
USP48-209ENST00000487880 OSTCQ9NRP0 149 aa1.81□□□□□ -2.12
USP48-209ENST00000487880 ERG28Q9UKR5 140 aa1.81□□□□□ -2.12
USP48-209ENST00000487880 CYSLTR1Q9Y271 337 aa1.81□□□□□ -2.12
USP48-209ENST00000487880 ANAPC1Q9H1A4 1944 aa1.81□□□□□ -2.12
USP48-209ENST00000487880 CHD3Q12873 2000 aaKnown RBP1.81□□□□□ -2.12
USP48-209ENST00000487880 PLXNA2O75051 1894 aa1.8□□□□□ -2.12
USP48-209ENST00000487880 TRGV10A0A0A0MS01 117 aa1.8□□□□□ -2.12
USP48-209ENST00000487880 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms