RNA–Protein interactions for RNA: ENST00000487604.1

RBM39-234, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 370 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-234ENST00000487604 TRAPPC5Q8IUR0 188 aa-1.83□□□□□ -2.7
RBM39-234ENST00000487604 BIN3Q9NQY0 253 aa-1.83□□□□□ -2.7
RBM39-234ENST00000487604 COL6A5A8TX70 2615 aa-1.83□□□□□ -2.7
RBM39-234ENST00000487604 APODP05090 189 aa-1.84□□□□□ -2.7
RBM39-234ENST00000487604 INSL3P51460 131 aa-1.84□□□□□ -2.7
RBM39-234ENST00000487604 CTNNBIP1Q9NSA3 81 aaPredicted RBP-1.84□□□□□ -2.7
RBM39-234ENST00000487604 TRPM7Q96QT4 1865 aa-1.84□□□□□ -2.7
RBM39-234ENST00000487604 CSMD1Q96PZ7 3565 aa-1.84□□□□□ -2.7
RBM39-234ENST00000487604 VIRMAQ69YN4 1812 aaKnown RBP-1.84□□□□□ -2.7
RBM39-234ENST00000487604 UBR2Q8IWV8 1755 aa-1.85□□□□□ -2.7
RBM39-234ENST00000487604 DNAH8Q96JB1 4490 aa-1.85□□□□□ -2.71
RBM39-234ENST00000487604 NUP210LQ5VU65 1888 aa-1.85□□□□□ -2.71
RBM39-234ENST00000487604 NCAPD3P42695 1498 aa-1.85□□□□□ -2.71
RBM39-234ENST00000487604 IFITM5A6NNB3 132 aa-1.85□□□□□ -2.71
RBM39-234ENST00000487604 HIGD1CA8MV81 97 aa-1.85□□□□□ -2.71
RBM39-234ENST00000487604 C9JAW5 83 aa-1.85□□□□□ -2.71
RBM39-234ENST00000487604 Q6ZRX8 168 aa-1.85□□□□□ -2.71
RBM39-234ENST00000487604 FAM216BQ8N7L0 139 aa-1.85□□□□□ -2.71
RBM39-234ENST00000487604 NBEAL2Q6ZNJ1 2754 aa-1.85□□□□□ -2.71
RBM39-234ENST00000487604 BLMP54132 1417 aaPredicted RBP-1.85□□□□□ -2.71
RBM39-234ENST00000487604 ADGRL3Q9HAR2 1447 aa-1.85□□□□□ -2.71
RBM39-234ENST00000487604 N4BP2Q86UW6 1770 aaPredicted RBP-1.85□□□□□ -2.71
RBM39-234ENST00000487604 DOCK11Q5JSL3 2073 aa-1.86□□□□□ -2.71
RBM39-234ENST00000487604 KNL1Q8NG31 2342 aa-1.86□□□□□ -2.71
RBM39-234ENST00000487604 TRAV17A0A0B4J275 112 aa-1.86□□□□□ -2.71
RBM39-234ENST00000487604 C1orf140Q5VVS0 124 aa-1.86□□□□□ -2.71
RBM39-234ENST00000487604 IFT20Q8IY31 132 aa-1.86□□□□□ -2.71
RBM39-234ENST00000487604 SREK1IP1Q8N9Q2 155 aaPredicted RBP-1.86□□□□□ -2.71
RBM39-234ENST00000487604 CCDC42Q96M95 316 aa-1.86□□□□□ -2.71
RBM39-234ENST00000487604 EFCAB11Q9BUY7 163 aa-1.86□□□□□ -2.71
RBM39-234ENST00000487604 LINC00472Q9H8W2 130 aa-1.86□□□□□ -2.71
RBM39-234ENST00000487604 FRYQ5TBA9 3013 aa-1.86□□□□□ -2.71
RBM39-234ENST00000487604 SPINK4O60575 86 aa-1.87□□□□□ -2.71
RBM39-234ENST00000487604 HIST1H2BKO60814 126 aa-1.87□□□□□ -2.71
RBM39-234ENST00000487604 IGF2P01344 180 aa-1.87□□□□□ -2.71
RBM39-234ENST00000487604 HIST1H2BJP06899 126 aa-1.87□□□□□ -2.71
RBM39-234ENST00000487604 TPM4P67936 248 aa-1.87□□□□□ -2.71
RBM39-234ENST00000487604 HELZP42694 1942 aaKnown RBP-1.87□□□□□ -2.71
RBM39-234ENST00000487604 TRGV1A0A0A0MS02 117 aa-1.88□□□□□ -2.71
RBM39-234ENST00000487604 TRAV5A0A0B4J249 113 aa-1.88□□□□□ -2.71
RBM39-234ENST00000487604 LOC107984640A0A0U1RRK4 108 aa-1.88□□□□□ -2.71
RBM39-234ENST00000487604 G3V318 75 aa-1.88□□□□□ -2.71
RBM39-234ENST00000487604 BANF1O75531 89 aa-1.88□□□□□ -2.71
RBM39-234ENST00000487604 LYPLA2O95372 231 aa-1.88□□□□□ -2.71
RBM39-234ENST00000487604 ELOF1P60002 83 aaKnown RBP-1.88□□□□□ -2.71
RBM39-234ENST00000487604 IQCJQ1A5X6 159 aa-1.88□□□□□ -2.71
RBM39-234ENST00000487604 TMEM242Q9NWH2 141 aa-1.88□□□□□ -2.71
RBM39-234ENST00000487604 MRPL36Q9P0J6 103 aaKnown RBP-1.88□□□□□ -2.71
RBM39-234ENST00000487604 SPCS1Q9Y6A9 102 aa-1.88□□□□□ -2.71
RBM39-234ENST00000487604 ANK1P16157 1881 aa-1.88□□□□□ -2.71
RBM39-234ENST00000487604 SRCAPQ6ZRS2 3230 aa-1.89□□□□□ -2.71
RBM39-234ENST00000487604 KIAA1549LQ6ZVL6 1849 aa-1.89□□□□□ -2.71
RBM39-234ENST00000487604 FXYD6-FXYD2A0A087WZ82 144 aa-1.89□□□□□ -2.71
RBM39-234ENST00000487604 I3L2K1 104 aa-1.89□□□□□ -2.71
RBM39-234ENST00000487604 HMGB3O15347 200 aaKnown RBP-1.89□□□□□ -2.71
RBM39-234ENST00000487604 PYYP10082 97 aa-1.89□□□□□ -2.71
RBM39-234ENST00000487604 GCHFRP30047 84 aa-1.89□□□□□ -2.71
RBM39-234ENST00000487604 INSL4Q14641 139 aa-1.89□□□□□ -2.71
RBM39-234ENST00000487604 MSMO1Q15800 293 aa-1.89□□□□□ -2.71
RBM39-234ENST00000487604 IZUMO2Q6UXV1 221 aa-1.89□□□□□ -2.71
RBM39-234ENST00000487604 OR4C12Q96R67 309 aa-1.89□□□□□ -2.71
RBM39-234ENST00000487604 TPRKBQ9Y3C4 175 aa-1.89□□□□□ -2.71
RBM39-234ENST00000487604 TRIOO75962 3097 aa-1.89□□□□□ -2.71
RBM39-234ENST00000487604 RREB1Q92766 1687 aa-1.9□□□□□ -2.71
RBM39-234ENST00000487604 C5orf42Q9H799 3197 aa-1.9□□□□□ -2.71
RBM39-234ENST00000487604 KIDINS220Q9ULH0 1771 aa-1.9□□□□□ -2.71
RBM39-234ENST00000487604 BCE1O60756 84 aa-1.9□□□□□ -2.71
RBM39-234ENST00000487604 CST7O76096 145 aa-1.9□□□□□ -2.71
RBM39-234ENST00000487604 RPS17P08708 135 aaKnown RBP-1.9□□□□□ -2.71
RBM39-234ENST00000487604 TAF1AQ15573 450 aaPredicted RBP-1.9□□□□□ -2.71
RBM39-234ENST00000487604 SIGMAR1Q99720 223 aa-1.9□□□□□ -2.71
RBM39-234ENST00000487604 FXYD6Q9H0Q3 95 aa-1.9□□□□□ -2.71
RBM39-234ENST00000487604 TSC2P49815 1807 aa-1.91□□□□□ -2.71
RBM39-234ENST00000487604 SMG1Q96Q15 3661 aaKnown RBP-1.91□□□□□ -2.71
RBM39-234ENST00000487604 TMEM14DPA8MWL7 114 aa-1.91□□□□□ -2.72
RBM39-234ENST00000487604 TRGC2P03986 189 aa-1.91□□□□□ -2.72
RBM39-234ENST00000487604 COX6B1P14854 86 aa-1.91□□□□□ -2.72
RBM39-234ENST00000487604 GLRXP35754 106 aa-1.91□□□□□ -2.72
RBM39-234ENST00000487604 LSM6P62312 80 aaKnown RBP-1.91□□□□□ -2.72
RBM39-234ENST00000487604 DCDP81605 110 aaKnown RBP-1.91□□□□□ -2.72
RBM39-234ENST00000487604 UNQ5815/PRO19632Q6UWF5 114 aa-1.91□□□□□ -2.72
RBM39-234ENST00000487604 C3orf62Q6ZUJ4 267 aa-1.91□□□□□ -2.72
RBM39-234ENST00000487604 COMMD3Q9UBI1 195 aa-1.91□□□□□ -2.72
RBM39-234ENST00000487604 GOLGA3Q08378 1498 aa-1.91□□□□□ -2.72
RBM39-234ENST00000487604 EYSQ5T1H1 3165 aa-1.91□□□□□ -2.72
RBM39-234ENST00000487604 ZCCHC6Q5VYS8 1495 aaKnown RBP-1.92□□□□□ -2.72
RBM39-234ENST00000487604 TRAV12-2A0A075B6T6 113 aa-1.92□□□□□ -2.72
RBM39-234ENST00000487604 TRBV10-3A0A0K0K1G6 114 aa-1.92□□□□□ -2.72
RBM39-234ENST00000487604 C3orf85A0A1B0GTC6 90 aa-1.92□□□□□ -2.72
RBM39-234ENST00000487604 TCTEX1D1Q8N7M0 179 aa-1.92□□□□□ -2.72
RBM39-234ENST00000487604 OR10X1Q8NGY0 326 aa-1.92□□□□□ -2.72
RBM39-234ENST00000487604 TMEM141Q96I45 108 aa-1.92□□□□□ -2.72
RBM39-234ENST00000487604 SDF2Q99470 211 aa-1.92□□□□□ -2.72
RBM39-234ENST00000487604 TP53AIP1Q9HCN2 124 aa-1.92□□□□□ -2.72
RBM39-234ENST00000487604 COA4Q9NYJ1 87 aa-1.92□□□□□ -2.72
RBM39-234ENST00000487604 CASKIN1Q8WXD9 1431 aa-1.92□□□□□ -2.72
RBM39-234ENST00000487604 SIPA1L3O60292 1781 aaPredicted RBP-1.93□□□□□ -2.72
RBM39-234ENST00000487604 WDR7Q9Y4E6 1490 aa-1.93□□□□□ -2.72
RBM39-234ENST00000487604 PLXNB2O15031 1838 aa-1.93□□□□□ -2.72
RBM39-234ENST00000487604 NINQ8N4C6 2090 aa-1.93□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms