RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 DIRC3C9JPN6 131 aa10.03□□□□□ -0.8
MCF2L-228ENST00000487354 LINC00694P0DN24 101 aa10.03□□□□□ -0.8
MCF2L-228ENST00000487354 CFAP126Q5VTH2 177 aa10.03□□□□□ -0.8
MCF2L-228ENST00000487354 THAP6Q8TBB0 222 aa10.03□□□□□ -0.8
MCF2L-228ENST00000487354 BAALCQ8WXS3 180 aa10.03□□□□□ -0.8
MCF2L-228ENST00000487354 TVP23CQ96ET8 276 aa10.03□□□□□ -0.8
MCF2L-228ENST00000487354 DNAJC30Q96LL9 226 aa10.03□□□□□ -0.8
MCF2L-228ENST00000487354 GTSF1LQ9H1H1 148 aa10.03□□□□□ -0.8
MCF2L-228ENST00000487354 TRBV6-4A0A1B0GX49 114 aa10.02□□□□□ -0.81
MCF2L-228ENST00000487354 FAM25EA8MYX2 175 aa10.02□□□□□ -0.81
MCF2L-228ENST00000487354 RS1O15537 224 aa10.02□□□□□ -0.81
MCF2L-228ENST00000487354 NOL3O60936 208 aaKnown RBP10.02□□□□□ -0.81
MCF2L-228ENST00000487354 MT1HL1P0DM35 61 aa10.02□□□□□ -0.81
MCF2L-228ENST00000487354 S100A5P33763 92 aa10.02□□□□□ -0.81
MCF2L-228ENST00000487354 RANP62826 216 aaKnown RBP10.02□□□□□ -0.81
MCF2L-228ENST00000487354 RHOHQ15669 191 aa10.02□□□□□ -0.81
MCF2L-228ENST00000487354 DAZ4Q86SG3 579 aaKnown RBP10.02□□□□□ -0.81
MCF2L-228ENST00000487354 TMED6Q8WW62 240 aa10.02□□□□□ -0.81
MCF2L-228ENST00000487354 DAZ3Q9NR90 486 aaKnown RBP10.02□□□□□ -0.81
MCF2L-228ENST00000487354 BOLA1Q9Y3E2 137 aa10.02□□□□□ -0.81
MCF2L-228ENST00000487354 HBG1P69891 147 aa10.01□□□□□ -0.81
MCF2L-228ENST00000487354 HBG2P69892 147 aa10.01□□□□□ -0.81
MCF2L-228ENST00000487354 RAB32Q13637 225 aa10.01□□□□□ -0.81
MCF2L-228ENST00000487354 ATP6V1FQ16864 119 aa10.01□□□□□ -0.81
MCF2L-228ENST00000487354 TRIQKQ629K1 86 aa10.01□□□□□ -0.81
MCF2L-228ENST00000487354 STX12Q86Y82 276 aa10.01□□□□□ -0.81
MCF2L-228ENST00000487354 DAZAP1Q96EP5 407 aaKnown RBP10.01□□□□□ -0.81
MCF2L-228ENST00000487354 C2orf50Q96LR7 162 aa10.01□□□□□ -0.81
MCF2L-228ENST00000487354 SEC22CQ9BRL7 303 aa10.01□□□□□ -0.81
MCF2L-228ENST00000487354 IGHV3-73A0A0B4J1V6 119 aa10□□□□□ -0.81
MCF2L-228ENST00000487354 F6UZH7 168 aa10□□□□□ -0.81
MCF2L-228ENST00000487354 IGLV2-8P01709 118 aa10□□□□□ -0.81
MCF2L-228ENST00000487354 CSN1S1P47710 185 aa10□□□□□ -0.81
MCF2L-228ENST00000487354 S100A10P60903 97 aa10□□□□□ -0.81
MCF2L-228ENST00000487354 ASAH1Q13510 395 aa10□□□□□ -0.81
MCF2L-228ENST00000487354 ATP6V0E2Q8NHE4 81 aa10□□□□□ -0.81
MCF2L-228ENST00000487354 PRADC1Q9BSG0 188 aa10□□□□□ -0.81
MCF2L-228ENST00000487354 TRAV8-3A0A0A6YYJ7 113 aa9.99□□□□□ -0.81
MCF2L-228ENST00000487354 RNF222A6NCQ9 220 aa9.99□□□□□ -0.81
MCF2L-228ENST00000487354 C5orf51A6NDU8 294 aa9.99□□□□□ -0.81
MCF2L-228ENST00000487354 NHLH2Q02577 135 aa9.99□□□□□ -0.81
MCF2L-228ENST00000487354 SPANXN2Q5MJ10 180 aa9.99□□□□□ -0.81
MCF2L-228ENST00000487354 C11orf21Q9P2W6 132 aa9.99□□□□□ -0.81
MCF2L-228ENST00000487354 Q9UF83 564 aa9.99□□□□□ -0.81
MCF2L-228ENST00000487354 PLA2G10O15496 165 aa9.98□□□□□ -0.81
MCF2L-228ENST00000487354 OR7C2O60412 319 aa9.98□□□□□ -0.81
MCF2L-228ENST00000487354 PVALBP20472 110 aaPredicted RBP9.98□□□□□ -0.81
MCF2L-228ENST00000487354 INPP1P49441 399 aa9.98□□□□□ -0.81
MCF2L-228ENST00000487354 UBE2L3P68036 154 aaKnown RBP9.98□□□□□ -0.81
MCF2L-228ENST00000487354 ZNF876PQ49A33 203 aa9.98□□□□□ -0.81
MCF2L-228ENST00000487354 C9orf85Q96MD7 179 aa9.98□□□□□ -0.81
MCF2L-228ENST00000487354 SDF2L1Q9HCN8 221 aa9.98□□□□□ -0.81
MCF2L-228ENST00000487354 TRAV8-1A0A0A6YYK1 113 aa9.97□□□□□ -0.81
MCF2L-228ENST00000487354 TRAV21A0A0B4J279 112 aa9.97□□□□□ -0.81
MCF2L-228ENST00000487354 RBFOX3A6NFN3 312 aa9.97□□□□□ -0.81
MCF2L-228ENST00000487354 EIF3GO75821 320 aaKnown RBP eCLIP9.97□□□□□ -0.81
MCF2L-228ENST00000487354 IL7P13232 177 aa9.97□□□□□ -0.81
MCF2L-228ENST00000487354 OR5C1Q8NGR4 320 aa9.97□□□□□ -0.81
MCF2L-228ENST00000487354 RBM38Q9H0Z9 239 aaKnown RBP9.97□□□□□ -0.81
MCF2L-228ENST00000487354 CNPY1Q3B7I2 92 aa9.96□□□□□ -0.82
MCF2L-228ENST00000487354 ZNF506Q5JVG8 444 aa9.96□□□□□ -0.82
MCF2L-228ENST00000487354 ASB13Q8WXK3 278 aa9.96□□□□□ -0.82
MCF2L-228ENST00000487354 WDR61Q9GZS3 305 aaKnown RBP9.96□□□□□ -0.82
MCF2L-228ENST00000487354 TRAV6A0A075B6T7 132 aa9.95□□□□□ -0.82
MCF2L-228ENST00000487354 PGPEP1LA6NFU8 196 aa9.95□□□□□ -0.82
MCF2L-228ENST00000487354 CIDEAO60543 219 aa9.95□□□□□ -0.82
MCF2L-228ENST00000487354 IGLV2-11P01706 119 aa9.95□□□□□ -0.82
MCF2L-228ENST00000487354 ZNF80P51504 273 aaPredicted RBP9.95□□□□□ -0.82
MCF2L-228ENST00000487354 Q8N976 141 aa9.95□□□□□ -0.82
MCF2L-228ENST00000487354 KCNS1Q96KK3 526 aa9.95□□□□□ -0.82
MCF2L-228ENST00000487354 HYLS1Q96M11 299 aa9.95□□□□□ -0.82
MCF2L-228ENST00000487354 OTORQ9NRC9 128 aa9.95□□□□□ -0.82
MCF2L-228ENST00000487354 CENPXA8MT69 81 aa9.94□□□□□ -0.82
MCF2L-228ENST00000487354 TCRBP04435 133 aa9.94□□□□□ -0.82
MCF2L-228ENST00000487354 MGST1P10620 155 aaKnown RBP9.94□□□□□ -0.82
MCF2L-228ENST00000487354 RNASE3P12724 160 aaKnown RBP9.94□□□□□ -0.82
MCF2L-228ENST00000487354 RPL37AP61513 92 aaKnown RBP9.94□□□□□ -0.82
MCF2L-228ENST00000487354 GOLT1AQ6ZVE7 132 aa9.94□□□□□ -0.82
MCF2L-228ENST00000487354 TMEM75Q8N9X5 138 aa9.94□□□□□ -0.82
MCF2L-228ENST00000487354 PTH2Q96A98 100 aa9.94□□□□□ -0.82
MCF2L-228ENST00000487354 RPH3ALQ9UNE2 315 aa9.94□□□□□ -0.82
MCF2L-228ENST00000487354 GAGE12JA6NER3 117 aa9.93□□□□□ -0.82
MCF2L-228ENST00000487354 GGTLC3B5MD39 225 aa9.93□□□□□ -0.82
MCF2L-228ENST00000487354 GNG5P63218 68 aa9.93□□□□□ -0.82
MCF2L-228ENST00000487354 GAGE1Q13065 139 aa9.93□□□□□ -0.82
MCF2L-228ENST00000487354 GAGE4Q13068 117 aa9.93□□□□□ -0.82
MCF2L-228ENST00000487354 GAGE5Q13069 117 aa9.93□□□□□ -0.82
MCF2L-228ENST00000487354 ACOT6Q3I5F7 207 aaPredicted RBP9.93□□□□□ -0.82
MCF2L-228ENST00000487354 GAGE13Q4V321 117 aa9.93□□□□□ -0.82
MCF2L-228ENST00000487354 TOR2AQ5JU69 321 aa9.93□□□□□ -0.82
MCF2L-228ENST00000487354 PARLQ9H300 379 aa9.93□□□□□ -0.82
MCF2L-228ENST00000487354 TREM1Q9NP99 234 aa9.93□□□□□ -0.82
MCF2L-228ENST00000487354 NUDT15Q9NV35 164 aa9.93□□□□□ -0.82
MCF2L-228ENST00000487354 COX11Q9Y6N1 276 aa9.93□□□□□ -0.82
MCF2L-228ENST00000487354 PGPA6NDG6 321 aa9.92□□□□□ -0.82
MCF2L-228ENST00000487354 H0YIZ8 118 aa9.92□□□□□ -0.82
MCF2L-228ENST00000487354 LYRM1O43325 122 aa9.92□□□□□ -0.82
MCF2L-228ENST00000487354 UFSP1Q6NVU6 142 aa9.92□□□□□ -0.82
MCF2L-228ENST00000487354 ATRAIDQ6UW56 229 aa9.92□□□□□ -0.82
MCF2L-228ENST00000487354 LINC00479Q96M42 142 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms