RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 TMED6Q8WW62 240 aa5.01□□□□□ -1.61
UBE4B-209ENST00000487244 FAM210BQ96KR6 192 aa5.01□□□□□ -1.61
UBE4B-209ENST00000487244 LINC00479Q96M42 142 aa5.01□□□□□ -1.61
UBE4B-209ENST00000487244 KRTAP9-3Q9BYQ3 159 aa5.01□□□□□ -1.61
UBE4B-209ENST00000487244 MAP1LC3BQ9GZQ8 125 aa5.01□□□□□ -1.61
UBE4B-209ENST00000487244 TMEM167BQ9NRX6 74 aa5.01□□□□□ -1.61
UBE4B-209ENST00000487244 MRPL16Q9NX20 251 aaKnown RBP5.01□□□□□ -1.61
UBE4B-209ENST00000487244 MDFICQ9P1T7 246 aa5.01□□□□□ -1.61
UBE4B-209ENST00000487244 NAGKQ9UJ70 344 aa5.01□□□□□ -1.61
UBE4B-209ENST00000487244 TRGV1A0A0A0MS02 117 aa5□□□□□ -1.61
UBE4B-209ENST00000487244 TRAV34A0A0B4J273 112 aa5□□□□□ -1.61
UBE4B-209ENST00000487244 A0A0J9YY99 117 aa5□□□□□ -1.61
UBE4B-209ENST00000487244 P0DMU3 169 aa5□□□□□ -1.61
UBE4B-209ENST00000487244 FAM231AP0DMU4 169 aa5□□□□□ -1.61
UBE4B-209ENST00000487244 FAM231CP0DMU5 169 aa5□□□□□ -1.61
UBE4B-209ENST00000487244 ZNF80P51504 273 aaPredicted RBP5□□□□□ -1.61
UBE4B-209ENST00000487244 KRTAP10-2P60368 255 aa5□□□□□ -1.61
UBE4B-209ENST00000487244 TMEM183BQ1AE95 376 aa5□□□□□ -1.61
UBE4B-209ENST00000487244 IBA57Q5T440 356 aaKnown RBP5□□□□□ -1.61
UBE4B-209ENST00000487244 TMEM183AQ8IXX5 376 aa5□□□□□ -1.61
UBE4B-209ENST00000487244 POM121L12Q8N7R1 296 aa5□□□□□ -1.61
UBE4B-209ENST00000487244 ZNF471Q9BX82 626 aaPredicted RBP5□□□□□ -1.61
UBE4B-209ENST00000487244 TREM1Q9NP99 234 aa5□□□□□ -1.61
UBE4B-209ENST00000487244 C11orf21Q9P2W6 132 aa5□□□□□ -1.61
UBE4B-209ENST00000487244 EPDR1Q9UM22 224 aa5□□□□□ -1.61
UBE4B-209ENST00000487244 LENEPQ9Y5L5 61 aa5□□□□□ -1.61
UBE4B-209ENST00000487244 DNAH6Q9C0G6 4158 aa4.99□□□□□ -1.61
UBE4B-209ENST00000487244 IGLV2-18A0A075B6J9 118 aa4.99□□□□□ -1.61
UBE4B-209ENST00000487244 TRGV2A0A075B6R0 118 aa4.99□□□□□ -1.61
UBE4B-209ENST00000487244 TRAV26-1A0A087WT03 109 aa4.99□□□□□ -1.61
UBE4B-209ENST00000487244 A0A0D9SG52 128 aa4.99□□□□□ -1.61
UBE4B-209ENST00000487244 A0A1B0GV50 99 aa4.99□□□□□ -1.61
UBE4B-209ENST00000487244 KANTRA0A1W2PQU2 76 aa4.99□□□□□ -1.61
UBE4B-209ENST00000487244 A0A1W2PRE2 83 aa4.99□□□□□ -1.61
UBE4B-209ENST00000487244 FAM74A7A6NL05 159 aa4.99□□□□□ -1.61
UBE4B-209ENST00000487244 M0R2N4 97 aa4.99□□□□□ -1.61
UBE4B-209ENST00000487244 GNRH2O43555 120 aa4.99□□□□□ -1.61
UBE4B-209ENST00000487244 SPINK4O60575 86 aa4.99□□□□□ -1.61
UBE4B-209ENST00000487244 NUDT3O95989 172 aa4.99□□□□□ -1.61
UBE4B-209ENST00000487244 IGHV3-53P01767 116 aa4.99□□□□□ -1.61
UBE4B-209ENST00000487244 OR5I1Q13606 314 aa4.99□□□□□ -1.61
UBE4B-209ENST00000487244 TMUB2Q71RG4 321 aa4.99□□□□□ -1.61
UBE4B-209ENST00000487244 PRNTQ86SH4 94 aa4.99□□□□□ -1.61
UBE4B-209ENST00000487244 UBE2DNLQ8IWF7 75 aa4.99□□□□□ -1.61
UBE4B-209ENST00000487244 ARL6IP6Q8N6S5 226 aa4.99□□□□□ -1.61
UBE4B-209ENST00000487244 CYB561D1Q8N8Q1 229 aa4.99□□□□□ -1.61
UBE4B-209ENST00000487244 TMEM75Q8N9X5 138 aa4.99□□□□□ -1.61
UBE4B-209ENST00000487244 FAM213BQ8TBF2 198 aa4.99□□□□□ -1.61
UBE4B-209ENST00000487244 ATG101Q9BSB4 218 aa4.99□□□□□ -1.61
UBE4B-209ENST00000487244 PSG8Q9UQ74 426 aa4.99□□□□□ -1.61
UBE4B-209ENST00000487244 IGHV3-16A0A0C4DH30 117 aa4.98□□□□□ -1.61
UBE4B-209ENST00000487244 SERTM2A0A1B0GWG4 89 aa4.98□□□□□ -1.61
UBE4B-209ENST00000487244 PEX7O00628 323 aa4.98□□□□□ -1.61
UBE4B-209ENST00000487244 PFDN1O60925 122 aa4.98□□□□□ -1.61
UBE4B-209ENST00000487244 GCGP01275 180 aa4.98□□□□□ -1.61
UBE4B-209ENST00000487244 IFNA7P01567 189 aa4.98□□□□□ -1.61
UBE4B-209ENST00000487244 TYMSP04818 313 aa4.98□□□□□ -1.61
UBE4B-209ENST00000487244 SEC11BP0C7V7 166 aa4.98□□□□□ -1.61
UBE4B-209ENST00000487244 FLI1Q01543 452 aaPredicted RBP4.98□□□□□ -1.61
UBE4B-209ENST00000487244 ZNF415Q09FC8 603 aa4.98□□□□□ -1.61
UBE4B-209ENST00000487244 C21orf62-AS1Q17RA5 79 aa4.98□□□□□ -1.61
UBE4B-209ENST00000487244 RNF151Q2KHN1 245 aa4.98□□□□□ -1.61
UBE4B-209ENST00000487244 TDRG1Q3Y452 100 aa4.98□□□□□ -1.61
UBE4B-209ENST00000487244 LGALSLQ3ZCW2 172 aaPredicted RBP4.98□□□□□ -1.61
UBE4B-209ENST00000487244 FAM159AQ6UWV7 190 aa4.98□□□□□ -1.61
UBE4B-209ENST00000487244 Q86TA4 180 aa4.98□□□□□ -1.61
UBE4B-209ENST00000487244 TCTE3Q8IZS6 198 aa4.98□□□□□ -1.61
UBE4B-209ENST00000487244 C15orf53Q8NAA6 179 aa4.98□□□□□ -1.61
UBE4B-209ENST00000487244 VSIG2Q96IQ7 327 aa4.98□□□□□ -1.61
UBE4B-209ENST00000487244 ARL2-SNX15V9GYD0 113 aa4.98□□□□□ -1.61
UBE4B-209ENST00000487244 TRAV21A0A0B4J279 112 aa4.97□□□□□ -1.61
UBE4B-209ENST00000487244 A0A1B0GVG6 124 aa4.97□□□□□ -1.61
UBE4B-209ENST00000487244 K7EQM0 130 aa4.97□□□□□ -1.61
UBE4B-209ENST00000487244 PAGE4O60829 102 aa4.97□□□□□ -1.61
UBE4B-209ENST00000487244 SFTA3P0C7M3 94 aa4.97□□□□□ -1.61
UBE4B-209ENST00000487244 STOML3Q8TAV4 291 aa4.97□□□□□ -1.61
UBE4B-209ENST00000487244 SFT2D1Q8WV19 159 aa4.97□□□□□ -1.61
UBE4B-209ENST00000487244 C18orf15Q96N68 181 aa4.97□□□□□ -1.61
UBE4B-209ENST00000487244 NDFIP1Q9BT67 221 aa4.97□□□□□ -1.61
UBE4B-209ENST00000487244 KRTAP3-1Q9BYR8 98 aa4.97□□□□□ -1.61
UBE4B-209ENST00000487244 LINC00588Q9Y4M8 146 aa4.97□□□□□ -1.61
UBE4B-209ENST00000487244 BIRC6Q9NR09 4857 aa4.96□□□□□ -1.61
UBE4B-209ENST00000487244 TRGV11A0A075B6L2 103 aa4.96□□□□□ -1.62
UBE4B-209ENST00000487244 UMAD1C9J7I0 102 aa4.96□□□□□ -1.62
UBE4B-209ENST00000487244 C1QBP02746 253 aa4.96□□□□□ -1.62
UBE4B-209ENST00000487244 PFN1P07737 140 aaKnown RBP4.96□□□□□ -1.62
UBE4B-209ENST00000487244 TPT1P13693 172 aaKnown RBP4.96□□□□□ -1.62
UBE4B-209ENST00000487244 CCL20P78556 96 aa4.96□□□□□ -1.62
UBE4B-209ENST00000487244 LGALS9BQ3B8N2 356 aa4.96□□□□□ -1.62
UBE4B-209ENST00000487244 RNF212Q495C1 297 aa4.96□□□□□ -1.62
UBE4B-209ENST00000487244 CST9LP1Q5W188 147 aa4.96□□□□□ -1.62
UBE4B-209ENST00000487244 Q6ZR54 194 aa4.96□□□□□ -1.62
UBE4B-209ENST00000487244 AKAP14Q86UN6 197 aa4.96□□□□□ -1.62
UBE4B-209ENST00000487244 ZNRF2Q8NHG8 242 aa4.96□□□□□ -1.62
UBE4B-209ENST00000487244 MBD3L1Q8WWY6 194 aa4.96□□□□□ -1.62
UBE4B-209ENST00000487244 ZC2HC1AQ96GY0 325 aa4.96□□□□□ -1.62
UBE4B-209ENST00000487244 ZNF479Q96JC4 524 aa4.96□□□□□ -1.62
UBE4B-209ENST00000487244 SDF2L1Q9HCN8 221 aa4.96□□□□□ -1.62
UBE4B-209ENST00000487244 A0A096LPF7 62 aa4.95□□□□□ -1.62
UBE4B-209ENST00000487244 IGKV3D-20A0A0C4DH25 116 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms