RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 SAMD13Q5VXD3 122 aa4.43□□□□□ -1.7
RTFDC1-209ENST00000487211 LCN15Q6UWW0 184 aa4.43□□□□□ -1.7
RTFDC1-209ENST00000487211 AMTNQ6UX39 209 aa4.43□□□□□ -1.7
RTFDC1-209ENST00000487211 FOXI2Q6ZQN5 318 aa4.43□□□□□ -1.7
RTFDC1-209ENST00000487211 SSX7Q7RTT5 188 aa4.43□□□□□ -1.7
RTFDC1-209ENST00000487211 AKAP14Q86UN6 197 aa4.43□□□□□ -1.7
RTFDC1-209ENST00000487211 EXOC3-AS1Q8N2X6 119 aa4.43□□□□□ -1.7
RTFDC1-209ENST00000487211 CSNK1G2-AS1Q8NCQ2 148 aa4.43□□□□□ -1.7
RTFDC1-209ENST00000487211 ZNF738Q8NE65 137 aa4.43□□□□□ -1.7
RTFDC1-209ENST00000487211 RPUSD4Q96CM3 377 aaKnown RBP4.43□□□□□ -1.7
RTFDC1-209ENST00000487211 GNPNAT1Q96EK6 184 aaPredicted RBP4.43□□□□□ -1.7
RTFDC1-209ENST00000487211 RCHY1Q96PM5 261 aa4.43□□□□□ -1.7
RTFDC1-209ENST00000487211 SLC35B3Q9H1N7 401 aa4.43□□□□□ -1.7
RTFDC1-209ENST00000487211 PARLQ9H300 379 aa4.43□□□□□ -1.7
RTFDC1-209ENST00000487211 CLEC5AQ9NY25 188 aa4.43□□□□□ -1.7
RTFDC1-209ENST00000487211 U3KQK5 164 aa4.43□□□□□ -1.7
RTFDC1-209ENST00000487211 HLA-DRB4X5D2U9 266 aa4.43□□□□□ -1.7
RTFDC1-209ENST00000487211 H7C423 109 aa4.42□□□□□ -1.7
RTFDC1-209ENST00000487211 BCL2L11O43521 198 aa4.42□□□□□ -1.7
RTFDC1-209ENST00000487211 OR7C2O60412 319 aa4.42□□□□□ -1.7
RTFDC1-209ENST00000487211 ZNF253O75346 499 aa4.42□□□□□ -1.7
RTFDC1-209ENST00000487211 CA1P00915 261 aaPredicted RBP4.42□□□□□ -1.7
RTFDC1-209ENST00000487211 MBP02144 154 aa4.42□□□□□ -1.7
RTFDC1-209ENST00000487211 STAG3L2P0CL84 134 aa4.42□□□□□ -1.7
RTFDC1-209ENST00000487211 STAG3L3P0CL85 134 aa4.42□□□□□ -1.7
RTFDC1-209ENST00000487211 RANP62826 216 aaKnown RBP4.42□□□□□ -1.7
RTFDC1-209ENST00000487211 KMT2AQ03164 3969 aa4.42□□□□□ -1.7
RTFDC1-209ENST00000487211 PDE6HQ13956 83 aa4.42□□□□□ -1.7
RTFDC1-209ENST00000487211 TMEM41BQ5BJD5 291 aa4.42□□□□□ -1.7
RTFDC1-209ENST00000487211 EBLN2Q6P2I7 272 aa4.42□□□□□ -1.7
RTFDC1-209ENST00000487211 OR4B1Q8NGF8 309 aa4.42□□□□□ -1.7
RTFDC1-209ENST00000487211 OR8A1Q8NGG7 326 aa4.42□□□□□ -1.7
RTFDC1-209ENST00000487211 SUN5Q8TC36 379 aa4.42□□□□□ -1.7
RTFDC1-209ENST00000487211 PHYHIPLQ96FC7 376 aa4.42□□□□□ -1.7
RTFDC1-209ENST00000487211 HYLS1Q96M11 299 aa4.42□□□□□ -1.7
RTFDC1-209ENST00000487211 SLC50A1Q9BRV3 221 aa4.42□□□□□ -1.7
RTFDC1-209ENST00000487211 ZNF471Q9BX82 626 aaPredicted RBP4.42□□□□□ -1.7
RTFDC1-209ENST00000487211 ACTR3CQ9C0K3 210 aaPredicted RBP4.42□□□□□ -1.7
RTFDC1-209ENST00000487211 XCL2Q9UBD3 114 aa4.42□□□□□ -1.7
RTFDC1-209ENST00000487211 DMBT1Q9UGM3 2413 aaPredicted RBP4.42□□□□□ -1.7
RTFDC1-209ENST00000487211 KANTRA0A1W2PQU2 76 aa4.41□□□□□ -1.7
RTFDC1-209ENST00000487211 PGPA6NDG6 321 aa4.41□□□□□ -1.7
RTFDC1-209ENST00000487211 CRXO43186 299 aaPredicted RBP4.41□□□□□ -1.7
RTFDC1-209ENST00000487211 PRM2P04554 102 aa4.41□□□□□ -1.7
RTFDC1-209ENST00000487211 SEC11BP0C7V7 166 aa4.41□□□□□ -1.7
RTFDC1-209ENST00000487211 ARL14EPLP0DKL9 152 aa4.41□□□□□ -1.7
RTFDC1-209ENST00000487211 CT45A10P0DMU9 189 aa4.41□□□□□ -1.7
RTFDC1-209ENST00000487211 GCHFRP30047 84 aa4.41□□□□□ -1.7
RTFDC1-209ENST00000487211 CDC34P49427 236 aaPredicted RBP4.41□□□□□ -1.7
RTFDC1-209ENST00000487211 NKX2-5P52952 324 aaPredicted RBP4.41□□□□□ -1.7
RTFDC1-209ENST00000487211 TAS2R45P59539 299 aa4.41□□□□□ -1.7
RTFDC1-209ENST00000487211 PSG9Q00887 426 aa4.41□□□□□ -1.7
RTFDC1-209ENST00000487211 ERCC8Q13216 396 aa4.41□□□□□ -1.7
RTFDC1-209ENST00000487211 RIGQ13278 110 aa4.41□□□□□ -1.7
RTFDC1-209ENST00000487211 KHDC3LQ587J8 217 aa4.41□□□□□ -1.7
RTFDC1-209ENST00000487211 AKR1C8PQ5T2L2 129 aa4.41□□□□□ -1.7
RTFDC1-209ENST00000487211 MORN3Q6PF18 240 aaPredicted RBP4.41□□□□□ -1.7
RTFDC1-209ENST00000487211 BAP18Q8IXM2 172 aa4.41□□□□□ -1.7
RTFDC1-209ENST00000487211 C9orf62Q8N4C0 152 aa4.41□□□□□ -1.7
RTFDC1-209ENST00000487211 RARRES2Q99969 163 aa4.41□□□□□ -1.7
RTFDC1-209ENST00000487211 Q9H3A6 140 aa4.41□□□□□ -1.7
RTFDC1-209ENST00000487211 EDA2RQ9HAV5 297 aa4.41□□□□□ -1.7
RTFDC1-209ENST00000487211 TP53TG1Q9Y2A0 90 aa4.41□□□□□ -1.7
RTFDC1-209ENST00000487211 TRAV12-2A0A075B6T6 113 aa4.4□□□□□ -1.71
RTFDC1-209ENST00000487211 M0R2Z0 102 aa4.4□□□□□ -1.71
RTFDC1-209ENST00000487211 PFDN1O60925 122 aa4.4□□□□□ -1.71
RTFDC1-209ENST00000487211 DUSP14O95147 198 aaKnown RBP4.4□□□□□ -1.71
RTFDC1-209ENST00000487211 FGF8P55075 233 aaPredicted RBP4.4□□□□□ -1.71
RTFDC1-209ENST00000487211 NUTF2P61970 127 aaKnown RBP4.4□□□□□ -1.71
RTFDC1-209ENST00000487211 UBE2L3P68036 154 aaKnown RBP4.4□□□□□ -1.71
RTFDC1-209ENST00000487211 HIST1H1AQ02539 215 aaPredicted RBP4.4□□□□□ -1.71
RTFDC1-209ENST00000487211 SPINK13Q1W4C9 94 aa4.4□□□□□ -1.71
RTFDC1-209ENST00000487211 KRTAP5-3Q6L8H2 238 aa4.4□□□□□ -1.71
RTFDC1-209ENST00000487211 C1orf158Q8N1D5 194 aa4.4□□□□□ -1.71
RTFDC1-209ENST00000487211 LYPD1Q8N2G4 141 aa4.4□□□□□ -1.71
RTFDC1-209ENST00000487211 OR11H2Q8NH07 326 aa4.4□□□□□ -1.71
RTFDC1-209ENST00000487211 STOML3Q8TAV4 291 aa4.4□□□□□ -1.71
RTFDC1-209ENST00000487211 PCNPQ8WW12 178 aaKnown RBP4.4□□□□□ -1.71
RTFDC1-209ENST00000487211 C11orf52Q96A22 123 aa4.4□□□□□ -1.71
RTFDC1-209ENST00000487211 VGLL1Q99990 258 aa4.4□□□□□ -1.71
RTFDC1-209ENST00000487211 KRTAP2-2Q9BYT5 123 aa4.4□□□□□ -1.71
RTFDC1-209ENST00000487211 AGPAT4-IT1Q9H0P7 198 aa4.4□□□□□ -1.71
RTFDC1-209ENST00000487211 PRELID1Q9Y255 219 aa4.4□□□□□ -1.71
RTFDC1-209ENST00000487211 STARD9Q9P2P6 4700 aa4.4□□□□□ -1.71
RTFDC1-209ENST00000487211 IGKV2-40A0A087WW87 121 aaPredicted RBP4.39□□□□□ -1.71
RTFDC1-209ENST00000487211 A0A0J9YWU9 116 aa4.39□□□□□ -1.71
RTFDC1-209ENST00000487211 LCE6AA0A183 80 aa4.39□□□□□ -1.71
RTFDC1-209ENST00000487211 CTXND1A0A1B0GTU2 59 aa4.39□□□□□ -1.71
RTFDC1-209ENST00000487211 ZNF705EA8MWA4 302 aaPredicted RBP4.39□□□□□ -1.71
RTFDC1-209ENST00000487211 DEFB4AO15263 64 aa4.39□□□□□ -1.71
RTFDC1-209ENST00000487211 CXorf1O96002 111 aa4.39□□□□□ -1.71
RTFDC1-209ENST00000487211 IGKV2D-40P01614 121 aaPredicted RBP4.39□□□□□ -1.71
RTFDC1-209ENST00000487211 RBMY1A1P0DJD3 496 aaKnown RBP4.39□□□□□ -1.71
RTFDC1-209ENST00000487211 RBMY1CP0DJD4 496 aa4.39□□□□□ -1.71
RTFDC1-209ENST00000487211 TPT1P13693 172 aaKnown RBP4.39□□□□□ -1.71
RTFDC1-209ENST00000487211 NDUFV3P56181 108 aaKnown RBP4.39□□□□□ -1.71
RTFDC1-209ENST00000487211 SSTP61278 116 aa4.39□□□□□ -1.71
RTFDC1-209ENST00000487211 RBMY1FQ15415 496 aaKnown RBP4.39□□□□□ -1.71
RTFDC1-209ENST00000487211 ZNF705AQ6ZN79 300 aaPredicted RBP4.39□□□□□ -1.71
RTFDC1-209ENST00000487211 SLC51BQ86UW2 128 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms