RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 LYRM9A8MSI8 78 aa13.85□□□□□ -0.19
PCOLCE-208ENST00000487172 NHLRC2Q8NBF2 726 aa13.85□□□□□ -0.19
PCOLCE-208ENST00000487172 SDF2L1Q9HCN8 221 aa13.85□□□□□ -0.19
PCOLCE-208ENST00000487172 NAGKQ9UJ70 344 aa13.85□□□□□ -0.19
PCOLCE-208ENST00000487172 CELA1Q9UNI1 258 aa13.85□□□□□ -0.19
PCOLCE-208ENST00000487172 TRBV20OR9-2A0A075B6H5 130 aa13.84□□□□□ -0.19
PCOLCE-208ENST00000487172 SNURFLB1AK76 121 aa13.84□□□□□ -0.19
PCOLCE-208ENST00000487172 SH2D1AO60880 128 aa13.84□□□□□ -0.19
PCOLCE-208ENST00000487172 TCL1AP56279 114 aa13.84□□□□□ -0.19
PCOLCE-208ENST00000487172 DAZ2Q13117 558 aaKnown RBP13.84□□□□□ -0.19
PCOLCE-208ENST00000487172 FAM222AQ5U5X8 452 aa13.84□□□□□ -0.19
PCOLCE-208ENST00000487172 STAB2Q8WWQ8 2551 aa13.83□□□□□ -0.19
PCOLCE-208ENST00000487172 IGKV3D-20A0A0C4DH25 116 aa13.83□□□□□ -0.2
PCOLCE-208ENST00000487172 GNRH2O43555 120 aa13.83□□□□□ -0.2
PCOLCE-208ENST00000487172 TYMSP04818 313 aa13.83□□□□□ -0.2
PCOLCE-208ENST00000487172 SRSF3P84103 164 aaKnown RBP13.83□□□□□ -0.2
PCOLCE-208ENST00000487172 ZNF415Q09FC8 603 aa13.83□□□□□ -0.2
PCOLCE-208ENST00000487172 GSN-AS1Q9NRJ2 163 aa13.83□□□□□ -0.2
PCOLCE-208ENST00000487172 MUC7Q8TAX7 377 aa13.82□□□□□ -0.2
PCOLCE-208ENST00000487172 BIN3Q9NQY0 253 aa13.82□□□□□ -0.2
PCOLCE-208ENST00000487172 IGHV3-16A0A0C4DH30 117 aa13.81□□□□□ -0.2
PCOLCE-208ENST00000487172 C9JQL5 133 aa13.81□□□□□ -0.2
PCOLCE-208ENST00000487172 ORM1P02763 201 aa13.81□□□□□ -0.2
PCOLCE-208ENST00000487172 NANOS2P60321 138 aaKnown RBP13.81□□□□□ -0.2
PCOLCE-208ENST00000487172 C12orf74Q32Q52 190 aa13.81□□□□□ -0.2
PCOLCE-208ENST00000487172 LINC01559Q495D7 138 aa13.81□□□□□ -0.2
PCOLCE-208ENST00000487172 SPXQ9BT56 116 aa13.81□□□□□ -0.2
PCOLCE-208ENST00000487172 NOP10Q9NPE3 64 aaKnown RBP13.81□□□□□ -0.2
PCOLCE-208ENST00000487172 MDFICQ9P1T7 246 aa13.81□□□□□ -0.2
PCOLCE-208ENST00000487172 KRBOX1C9JBD0 128 aa13.8□□□□□ -0.2
PCOLCE-208ENST00000487172 CEBPGP53567 150 aa13.8□□□□□ -0.2
PCOLCE-208ENST00000487172 DNLZQ5SXM8 178 aa13.8□□□□□ -0.2
PCOLCE-208ENST00000487172 LINC00612Q8N6U2 182 aa13.8□□□□□ -0.2
PCOLCE-208ENST00000487172 OCC1Q8TAD7 63 aa13.8□□□□□ -0.2
PCOLCE-208ENST00000487172 LY96Q9Y6Y9 160 aa13.8□□□□□ -0.2
PCOLCE-208ENST00000487172 PGPEP1LA6NFU8 196 aa13.79□□□□□ -0.2
PCOLCE-208ENST00000487172 ZNF727A8MUV8 499 aa13.79□□□□□ -0.2
PCOLCE-208ENST00000487172 SPINK4O60575 86 aa13.79□□□□□ -0.2
PCOLCE-208ENST00000487172 MGST1P10620 155 aaKnown RBP13.79□□□□□ -0.2
PCOLCE-208ENST00000487172 LGALS9BQ3B8N2 356 aa13.79□□□□□ -0.2
PCOLCE-208ENST00000487172 FAM74A3Q4VXF1 159 aa13.79□□□□□ -0.2
PCOLCE-208ENST00000487172 PRR27Q6MZM9 219 aa13.79□□□□□ -0.2
PCOLCE-208ENST00000487172 SMIM7Q9BQ49 75 aa13.79□□□□□ -0.2
PCOLCE-208ENST00000487172 C19orf71A6NCJ1 209 aa13.78□□□□□ -0.2
PCOLCE-208ENST00000487172 B4DEV8 164 aa13.78□□□□□ -0.2
PCOLCE-208ENST00000487172 C3orf84H3BNL1 204 aa13.78□□□□□ -0.2
PCOLCE-208ENST00000487172 ZNF575Q86XF7 245 aa13.78□□□□□ -0.2
PCOLCE-208ENST00000487172 DAD1P61803 113 aa13.77□□□□□ -0.21
PCOLCE-208ENST00000487172 C18orf15Q96N68 181 aa13.77□□□□□ -0.21
PCOLCE-208ENST00000487172 M0R036 132 aa13.76□□□□□ -0.21
PCOLCE-208ENST00000487172 CXCL1P09341 107 aa13.76□□□□□ -0.21
PCOLCE-208ENST00000487172 RNASE3P12724 160 aaKnown RBP13.76□□□□□ -0.21
PCOLCE-208ENST00000487172 Q6ZTC4 211 aa13.76□□□□□ -0.21
PCOLCE-208ENST00000487172 DAZAP1Q96EP5 407 aaKnown RBP13.76□□□□□ -0.21
PCOLCE-208ENST00000487172 C9orf85Q96MD7 179 aa13.76□□□□□ -0.21
PCOLCE-208ENST00000487172 K7EN84 100 aa13.75□□□□□ -0.21
PCOLCE-208ENST00000487172 DEFB130BP0DP73 79 aa13.75□□□□□ -0.21
PCOLCE-208ENST00000487172 DEFB130AP0DP74 79 aa13.75□□□□□ -0.21
PCOLCE-208ENST00000487172 ASIPP42127 132 aa13.75□□□□□ -0.21
PCOLCE-208ENST00000487172 OR5I1Q13606 314 aa13.75□□□□□ -0.21
PCOLCE-208ENST00000487172 Q6ZTI0 123 aa13.75□□□□□ -0.21
PCOLCE-208ENST00000487172 PHLDA1Q8WV24 401 aaPredicted RBP13.75□□□□□ -0.21
PCOLCE-208ENST00000487172 IL36BQ9NZH7 164 aa13.75□□□□□ -0.21
PCOLCE-208ENST00000487172 TRAV10A0A0B4J240 114 aa13.74□□□□□ -0.21
PCOLCE-208ENST00000487172 M0R2P5 195 aa13.74□□□□□ -0.21
PCOLCE-208ENST00000487172 SOHLH1Q5JUK2 328 aa13.74□□□□□ -0.21
PCOLCE-208ENST00000487172 LINC01551Q86U37 167 aa13.74□□□□□ -0.21
PCOLCE-208ENST00000487172 RASL10AQ92737 203 aa13.74□□□□□ -0.21
PCOLCE-208ENST00000487172 PTH2Q96A98 100 aa13.74□□□□□ -0.21
PCOLCE-208ENST00000487172 TRGV1A0A0A0MS02 117 aa13.73□□□□□ -0.21
PCOLCE-208ENST00000487172 GAGE12BA1L429 117 aa13.73□□□□□ -0.21
PCOLCE-208ENST00000487172 GAGE7O76087 117 aa13.73□□□□□ -0.21
PCOLCE-208ENST00000487172 GAGE12FP0CL80 117 aa13.73□□□□□ -0.21
PCOLCE-208ENST00000487172 GAGE12GP0CL81 117 aa13.73□□□□□ -0.21
PCOLCE-208ENST00000487172 GAGE12IP0CL82 117 aa13.73□□□□□ -0.21
PCOLCE-208ENST00000487172 S100A4P26447 101 aaKnown RBP13.73□□□□□ -0.21
PCOLCE-208ENST00000487172 TMEM241Q24JQ0 296 aa13.73□□□□□ -0.21
PCOLCE-208ENST00000487172 UQCC3Q6UW78 93 aa13.73□□□□□ -0.21
PCOLCE-208ENST00000487172 FAM231DQ6ZW35 169 aa13.73□□□□□ -0.21
PCOLCE-208ENST00000487172 NUDT10Q8NFP7 164 aa13.73□□□□□ -0.21
PCOLCE-208ENST00000487172 NUDT11Q96G61 164 aa13.73□□□□□ -0.21
PCOLCE-208ENST00000487172 TMSB15BA0A087X1C1 80 aa13.72□□□□□ -0.21
PCOLCE-208ENST00000487172 GRIFINA4D1Z8 144 aa13.72□□□□□ -0.21
PCOLCE-208ENST00000487172 LINC00862A6NCI5 91 aa13.72□□□□□ -0.21
PCOLCE-208ENST00000487172 NUPR2A6NF83 97 aa13.72□□□□□ -0.21
PCOLCE-208ENST00000487172 P01737 135 aa13.72□□□□□ -0.21
PCOLCE-208ENST00000487172 MED14OSP0DP75 135 aa13.72□□□□□ -0.21
PCOLCE-208ENST00000487172 RPS20P60866 119 aaKnown RBP13.72□□□□□ -0.21
PCOLCE-208ENST00000487172 RPL19P84098 196 aaKnown RBP13.72□□□□□ -0.21
PCOLCE-208ENST00000487172 CEMP1Q6PRD7 247 aaPredicted RBP13.72□□□□□ -0.21
PCOLCE-208ENST00000487172 NDUFAF3Q9BU61 184 aa13.72□□□□□ -0.21
PCOLCE-208ENST00000487172 NAT8Q9UHE5 227 aa13.72□□□□□ -0.21
PCOLCE-208ENST00000487172 ATP5G1P05496 136 aa13.71□□□□□ -0.21
PCOLCE-208ENST00000487172 ARMS2P0C7Q2 107 aa13.71□□□□□ -0.21
PCOLCE-208ENST00000487172 PIK3CD-AS1Q5SR53 167 aa13.71□□□□□ -0.21
PCOLCE-208ENST00000487172 CASC10Q5T4H9 136 aa13.71□□□□□ -0.21
PCOLCE-208ENST00000487172 SCRT2Q9NQ03 307 aa13.71□□□□□ -0.21
PCOLCE-208ENST00000487172 MRPL16Q9NX20 251 aaKnown RBP13.71□□□□□ -0.21
PCOLCE-208ENST00000487172 DNAH7Q8WXX0 4024 aa13.71□□□□□ -0.21
PCOLCE-208ENST00000487172 DEFB131BA0A096LNP1 70 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms