RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 HTN3P15516 51 aa10.4□□□□□ -0.74
LIMS3-205ENST00000487150 TMEM183AQ8IXX5 376 aa10.4□□□□□ -0.74
LIMS3-205ENST00000487150 LINC00479Q96M42 142 aa10.4□□□□□ -0.74
LIMS3-205ENST00000487150 VAX2Q9UIW0 290 aa10.4□□□□□ -0.74
LIMS3-205ENST00000487150 IGHV4-4A0A075B6R2 117 aa10.39□□□□□ -0.75
LIMS3-205ENST00000487150 TRGV1A0A0A0MS02 117 aa10.39□□□□□ -0.75
LIMS3-205ENST00000487150 FAM162BQ5T6X4 162 aa10.39□□□□□ -0.75
LIMS3-205ENST00000487150 C15orf53Q8NAA6 179 aa10.39□□□□□ -0.75
LIMS3-205ENST00000487150 SMIM12Q96EX1 92 aa10.39□□□□□ -0.75
LIMS3-205ENST00000487150 C8orf49Q96NF6 230 aa10.39□□□□□ -0.75
LIMS3-205ENST00000487150 GAGE12BA1L429 117 aa10.38□□□□□ -0.75
LIMS3-205ENST00000487150 SPINK4O60575 86 aa10.38□□□□□ -0.75
LIMS3-205ENST00000487150 GAGE7O76087 117 aa10.38□□□□□ -0.75
LIMS3-205ENST00000487150 GAGE12FP0CL80 117 aa10.38□□□□□ -0.75
LIMS3-205ENST00000487150 GAGE12GP0CL81 117 aa10.38□□□□□ -0.75
LIMS3-205ENST00000487150 GAGE12IP0CL82 117 aa10.38□□□□□ -0.75
LIMS3-205ENST00000487150 CCL20P78556 96 aa10.38□□□□□ -0.75
LIMS3-205ENST00000487150 F5H768 121 aa10.37□□□□□ -0.75
LIMS3-205ENST00000487150 BAGE2Q86Y30 109 aa10.37□□□□□ -0.75
LIMS3-205ENST00000487150 STARD9Q9P2P6 4700 aa10.36□□□□□ -0.75
LIMS3-205ENST00000487150 IGHV3-16A0A0C4DH30 117 aa10.36□□□□□ -0.75
LIMS3-205ENST00000487150 M0R2P5 195 aa10.36□□□□□ -0.75
LIMS3-205ENST00000487150 TYMSP04818 313 aa10.36□□□□□ -0.75
LIMS3-205ENST00000487150 RPL35P42766 123 aaKnown RBP10.36□□□□□ -0.75
LIMS3-205ENST00000487150 ZNF80P51504 273 aaPredicted RBP10.36□□□□□ -0.75
LIMS3-205ENST00000487150 LGALS9CQ6DKI2 356 aa10.36□□□□□ -0.75
LIMS3-205ENST00000487150 Q6ZTI0 123 aa10.36□□□□□ -0.75
LIMS3-205ENST00000487150 LYPD6BQ8NI32 183 aa10.36□□□□□ -0.75
LIMS3-205ENST00000487150 LINC00476Q8WZB0 136 aa10.36□□□□□ -0.75
LIMS3-205ENST00000487150 BIN3Q9NQY0 253 aa10.36□□□□□ -0.75
LIMS3-205ENST00000487150 S100A4P26447 101 aaKnown RBP10.35□□□□□ -0.75
LIMS3-205ENST00000487150 ASIPP42127 132 aa10.35□□□□□ -0.75
LIMS3-205ENST00000487150 SLAQ13239 276 aa10.35□□□□□ -0.75
LIMS3-205ENST00000487150 Q6ZQT7 251 aa10.35□□□□□ -0.75
LIMS3-205ENST00000487150 RASL10AQ92737 203 aa10.35□□□□□ -0.75
LIMS3-205ENST00000487150 ZC2HC1AQ96GY0 325 aa10.35□□□□□ -0.75
LIMS3-205ENST00000487150 MDFICQ9P1T7 246 aa10.35□□□□□ -0.75
LIMS3-205ENST00000487150 B4DEV8 164 aa10.34□□□□□ -0.75
LIMS3-205ENST00000487150 H3BNG1 76 aa10.34□□□□□ -0.75
LIMS3-205ENST00000487150 SH2D1AO60880 128 aa10.34□□□□□ -0.75
LIMS3-205ENST00000487150 NDUFS6O75380 124 aaKnown RBP10.34□□□□□ -0.75
LIMS3-205ENST00000487150 ORM1P02763 201 aa10.34□□□□□ -0.75
LIMS3-205ENST00000487150 P0DMU3 169 aa10.34□□□□□ -0.75
LIMS3-205ENST00000487150 FAM231AP0DMU4 169 aa10.34□□□□□ -0.75
LIMS3-205ENST00000487150 FAM231CP0DMU5 169 aa10.34□□□□□ -0.75
LIMS3-205ENST00000487150 GNG4P50150 75 aa10.34□□□□□ -0.75
LIMS3-205ENST00000487150 ZNF674Q2M3X9 581 aa10.34□□□□□ -0.75
LIMS3-205ENST00000487150 TMEM88Q6PEY1 159 aa10.34□□□□□ -0.75
LIMS3-205ENST00000487150 MED9Q9NWA0 146 aa10.34□□□□□ -0.75
LIMS3-205ENST00000487150 APLNQ9ULZ1 77 aa10.34□□□□□ -0.75
LIMS3-205ENST00000487150 TMEM250H0YL14 139 aa10.33□□□□□ -0.76
LIMS3-205ENST00000487150 CIDEAO60543 219 aa10.33□□□□□ -0.76
LIMS3-205ENST00000487150 LY6G6CO95867 125 aa10.33□□□□□ -0.76
LIMS3-205ENST00000487150 LINC01559Q495D7 138 aa10.33□□□□□ -0.76
LIMS3-205ENST00000487150 PIK3CD-AS1Q5SR53 167 aa10.33□□□□□ -0.76
LIMS3-205ENST00000487150 TEX261Q6UWH6 196 aa10.33□□□□□ -0.76
LIMS3-205ENST00000487150 PTH2Q96A98 100 aa10.33□□□□□ -0.76
LIMS3-205ENST00000487150 MLST8Q9BVC4 326 aa10.33□□□□□ -0.76
LIMS3-205ENST00000487150 MRPL16Q9NX20 251 aaKnown RBP10.33□□□□□ -0.76
LIMS3-205ENST00000487150 RBFOX3A6NFN3 312 aa10.32□□□□□ -0.76
LIMS3-205ENST00000487150 GNRH2O43555 120 aa10.32□□□□□ -0.76
LIMS3-205ENST00000487150 CXCL1P09341 107 aa10.32□□□□□ -0.76
LIMS3-205ENST00000487150 CENPWQ5EE01 88 aa10.32□□□□□ -0.76
LIMS3-205ENST00000487150 IL36BQ9NZH7 164 aa10.32□□□□□ -0.76
LIMS3-205ENST00000487150 CSMD3Q7Z407 3707 aa10.31□□□□□ -0.76
LIMS3-205ENST00000487150 TRAV4A0A0B4J268 109 aa10.31□□□□□ -0.76
LIMS3-205ENST00000487150 OR5I1Q13606 314 aa10.31□□□□□ -0.76
LIMS3-205ENST00000487150 ZNF506Q5JVG8 444 aa10.31□□□□□ -0.76
LIMS3-205ENST00000487150 DNLZQ5SXM8 178 aa10.31□□□□□ -0.76
LIMS3-205ENST00000487150 SYT8Q8NBV8 401 aa10.31□□□□□ -0.76
LIMS3-205ENST00000487150 C9orf85Q96MD7 179 aa10.31□□□□□ -0.76
LIMS3-205ENST00000487150 EIF5A2Q9GZV4 153 aaKnown RBP10.31□□□□□ -0.76
LIMS3-205ENST00000487150 C11orf21Q9P2W6 132 aa10.31□□□□□ -0.76
LIMS3-205ENST00000487150 IGKV3D-20A0A0C4DH25 116 aa10.3□□□□□ -0.76
LIMS3-205ENST00000487150 KRBOX1C9JBD0 128 aa10.3□□□□□ -0.76
LIMS3-205ENST00000487150 ZNF876PQ49A33 203 aa10.3□□□□□ -0.76
LIMS3-205ENST00000487150 NHLRC2Q8NBF2 726 aa10.3□□□□□ -0.76
LIMS3-205ENST00000487150 DAZAP1Q96EP5 407 aaKnown RBP10.3□□□□□ -0.76
LIMS3-205ENST00000487150 DERL1Q9BUN8 251 aa10.3□□□□□ -0.76
LIMS3-205ENST00000487150 PRO0255Q9UI72 69 aa10.3□□□□□ -0.76
LIMS3-205ENST00000487150 KMT2CQ8NEZ4 4911 aaKnown RBP10.3□□□□□ -0.76
LIMS3-205ENST00000487150 TRAV26-1A0A087WT03 109 aa10.29□□□□□ -0.76
LIMS3-205ENST00000487150 XKRY2A2RUG3 117 aa10.29□□□□□ -0.76
LIMS3-205ENST00000487150 C9JCJ5 164 aa10.29□□□□□ -0.76
LIMS3-205ENST00000487150 M0R036 132 aa10.29□□□□□ -0.76
LIMS3-205ENST00000487150 MED14OSP0DP75 135 aa10.29□□□□□ -0.76
LIMS3-205ENST00000487150 MGST1P10620 155 aaKnown RBP10.29□□□□□ -0.76
LIMS3-205ENST00000487150 CRIP1P50238 77 aa10.29□□□□□ -0.76
LIMS3-205ENST00000487150 FAM3BP58499 235 aaPredicted RBP10.29□□□□□ -0.76
LIMS3-205ENST00000487150 TOR2AQ5JU69 321 aa10.29□□□□□ -0.76
LIMS3-205ENST00000487150 PRR27Q6MZM9 219 aa10.29□□□□□ -0.76
LIMS3-205ENST00000487150 OR4C5Q8NGB2 326 aa10.29□□□□□ -0.76
LIMS3-205ENST00000487150 FAM210AQ96ND0 272 aa10.29□□□□□ -0.76
LIMS3-205ENST00000487150 TRGV4A0A0C4DH28 118 aa10.28□□□□□ -0.76
LIMS3-205ENST00000487150 RNASE3P12724 160 aaKnown RBP10.28□□□□□ -0.76
LIMS3-205ENST00000487150 RPS20P60866 119 aaKnown RBP10.28□□□□□ -0.76
LIMS3-205ENST00000487150 UBE2DNLQ8IWF7 75 aa10.28□□□□□ -0.76
LIMS3-205ENST00000487150 A8MWV9 139 aa10.27□□□□□ -0.77
LIMS3-205ENST00000487150 H3BVH4 76 aa10.27□□□□□ -0.77
LIMS3-205ENST00000487150 NUDT3O95989 172 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms