RNA–Protein interactions for RNA: ENST00000487118.1

NUDCD3-209, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-209ENST00000487118 GATD1Q8NB37 220 aa6.36□□□□□ -1.39
NUDCD3-209ENST00000487118 FRZBQ92765 325 aa6.36□□□□□ -1.39
NUDCD3-209ENST00000487118 ZNF747Q9BV97 191 aa6.36□□□□□ -1.39
NUDCD3-209ENST00000487118 TRAPPC1Q9Y5R8 145 aa6.36□□□□□ -1.39
NUDCD3-209ENST00000487118 A0A1B0GUT8 65 aa6.35□□□□□ -1.39
NUDCD3-209ENST00000487118 A0A1B0GW15 77 aa6.35□□□□□ -1.39
NUDCD3-209ENST00000487118 C7orf71A4D174 169 aa6.35□□□□□ -1.39
NUDCD3-209ENST00000487118 RBMY1BA6NDE4 496 aaKnown RBP6.35□□□□□ -1.39
NUDCD3-209ENST00000487118 RBMY1EA6NEQ0 496 aaKnown RBP6.35□□□□□ -1.39
NUDCD3-209ENST00000487118 SNURFLB1AK76 121 aa6.35□□□□□ -1.39
NUDCD3-209ENST00000487118 HLA-DQA1P01909 254 aa6.35□□□□□ -1.39
NUDCD3-209ENST00000487118 RBMY1DP0C7P1 496 aaKnown RBP6.35□□□□□ -1.39
NUDCD3-209ENST00000487118 TRGC1P0CF51 173 aa6.35□□□□□ -1.39
NUDCD3-209ENST00000487118 RNASE4P34096 147 aaKnown RBP6.35□□□□□ -1.39
NUDCD3-209ENST00000487118 CDKN1BP46527 198 aa6.35□□□□□ -1.39
NUDCD3-209ENST00000487118 HBBP68871 147 aa6.35□□□□□ -1.39
NUDCD3-209ENST00000487118 FABP9Q0Z7S8 132 aa6.35□□□□□ -1.39
NUDCD3-209ENST00000487118 RIGQ13278 110 aa6.35□□□□□ -1.39
NUDCD3-209ENST00000487118 ZNF124Q15973 351 aa6.35□□□□□ -1.39
NUDCD3-209ENST00000487118 DNLZQ5SXM8 178 aa6.35□□□□□ -1.39
NUDCD3-209ENST00000487118 C9orf66Q5T8R8 295 aa6.35□□□□□ -1.39
NUDCD3-209ENST00000487118 GFI1BQ5VTD9 330 aa6.35□□□□□ -1.39
NUDCD3-209ENST00000487118 Q6ZQT7 251 aa6.35□□□□□ -1.39
NUDCD3-209ENST00000487118 ZFP82Q8N141 532 aa6.35□□□□□ -1.39
NUDCD3-209ENST00000487118 FER1L6-AS1Q8NA97 138 aa6.35□□□□□ -1.39
NUDCD3-209ENST00000487118 CNFNQ9BYD5 112 aa6.35□□□□□ -1.39
NUDCD3-209ENST00000487118 MRPL18Q9H0U6 180 aaKnown RBP6.35□□□□□ -1.39
NUDCD3-209ENST00000487118 GRIFINA4D1Z8 144 aa6.34□□□□□ -1.39
NUDCD3-209ENST00000487118 OR11H12B2RN74 326 aa6.34□□□□□ -1.39
NUDCD3-209ENST00000487118 F2Z2F3 143 aa6.34□□□□□ -1.39
NUDCD3-209ENST00000487118 J3KRW8 73 aa6.34□□□□□ -1.39
NUDCD3-209ENST00000487118 SNAI2O43623 268 aa6.34□□□□□ -1.39
NUDCD3-209ENST00000487118 HIST1H2BKO60814 126 aa6.34□□□□□ -1.39
NUDCD3-209ENST00000487118 ZNF324O75467 553 aaPredicted RBP6.34□□□□□ -1.39
NUDCD3-209ENST00000487118 IGKV3-20P01619 116 aa6.34□□□□□ -1.39
NUDCD3-209ENST00000487118 HIST1H2BJP06899 126 aa6.34□□□□□ -1.39
NUDCD3-209ENST00000487118 ARMS2P0C7Q2 107 aa6.34□□□□□ -1.39
NUDCD3-209ENST00000487118 MED14OSP0DP75 135 aa6.34□□□□□ -1.39
NUDCD3-209ENST00000487118 HIST1H2BOP23527 126 aa6.34□□□□□ -1.39
NUDCD3-209ENST00000487118 HIST1H2BBP33778 126 aa6.34□□□□□ -1.39
NUDCD3-209ENST00000487118 HIST1H2BDP58876 126 aa6.34□□□□□ -1.39
NUDCD3-209ENST00000487118 HIST1H2BCP62807 126 aa6.34□□□□□ -1.39
NUDCD3-209ENST00000487118 HIST2H2BEQ16778 126 aa6.34□□□□□ -1.39
NUDCD3-209ENST00000487118 SPINK13Q1W4C9 94 aa6.34□□□□□ -1.39
NUDCD3-209ENST00000487118 ANXA2RQ3ZCQ2 193 aa6.34□□□□□ -1.39
NUDCD3-209ENST00000487118 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.34□□□□□ -1.39
NUDCD3-209ENST00000487118 LYZL1Q6UWQ5 148 aa6.34□□□□□ -1.39
NUDCD3-209ENST00000487118 WFDC9Q8NEX5 89 aa6.34□□□□□ -1.39
NUDCD3-209ENST00000487118 HIST1H2BHQ93079 126 aa6.34□□□□□ -1.39
NUDCD3-209ENST00000487118 HIST1H2BNQ99877 126 aa6.34□□□□□ -1.39
NUDCD3-209ENST00000487118 HIST1H2BMQ99879 126 aa6.34□□□□□ -1.39
NUDCD3-209ENST00000487118 SSBP4Q9BWG4 385 aaPredicted RBP6.34□□□□□ -1.39
NUDCD3-209ENST00000487118 C19orf73Q9NVV2 129 aa6.34□□□□□ -1.39
NUDCD3-209ENST00000487118 BIRC6Q9NR09 4857 aa6.34□□□□□ -1.39
NUDCD3-209ENST00000487118 TRAV12-3A0A0B4J271 114 aa6.33□□□□□ -1.4
NUDCD3-209ENST00000487118 LOC105371267A0A1B0GV96 52 aa6.33□□□□□ -1.4
NUDCD3-209ENST00000487118 M0R2Z0 102 aa6.33□□□□□ -1.4
NUDCD3-209ENST00000487118 CRXO43186 299 aaPredicted RBP6.33□□□□□ -1.4
NUDCD3-209ENST00000487118 AMBPP02760 352 aa6.33□□□□□ -1.4
NUDCD3-209ENST00000487118 S100A8P05109 93 aa6.33□□□□□ -1.4
NUDCD3-209ENST00000487118 OR5AL1P0C617 328 aa6.33□□□□□ -1.4
NUDCD3-209ENST00000487118 TDRG1Q3Y452 100 aa6.33□□□□□ -1.4
NUDCD3-209ENST00000487118 TRPT1Q86TN4 253 aaKnown RBP6.33□□□□□ -1.4
NUDCD3-209ENST00000487118 C3orf56Q8N813 242 aa6.33□□□□□ -1.4
NUDCD3-209ENST00000487118 BORCS7Q96B45 105 aa6.33□□□□□ -1.4
NUDCD3-209ENST00000487118 MCRIP2Q9BUT9 160 aaKnown RBP6.33□□□□□ -1.4
NUDCD3-209ENST00000487118 IGHV4-4A0A075B6R2 117 aa6.32□□□□□ -1.4
NUDCD3-209ENST00000487118 TRAV12-2A0A075B6T6 113 aa6.32□□□□□ -1.4
NUDCD3-209ENST00000487118 CD7P09564 240 aa6.32□□□□□ -1.4
NUDCD3-209ENST00000487118 CAMPP49913 170 aa6.32□□□□□ -1.4
NUDCD3-209ENST00000487118 RAB4BP61018 213 aa6.32□□□□□ -1.4
NUDCD3-209ENST00000487118 SLAQ13239 276 aa6.32□□□□□ -1.4
NUDCD3-209ENST00000487118 COA6Q5JTJ3 125 aaKnown RBP6.32□□□□□ -1.4
NUDCD3-209ENST00000487118 MUC21Q5SSG8 566 aa6.32□□□□□ -1.4
NUDCD3-209ENST00000487118 SHISA2Q6UWI4 295 aa6.32□□□□□ -1.4
NUDCD3-209ENST00000487118 ZNF493Q6ZR52 646 aa6.32□□□□□ -1.4
NUDCD3-209ENST00000487118 KCNS1Q96KK3 526 aa6.32□□□□□ -1.4
NUDCD3-209ENST00000487118 C20orf144Q9BQM9 153 aa6.32□□□□□ -1.4
NUDCD3-209ENST00000487118 SCRT2Q9NQ03 307 aa6.32□□□□□ -1.4
NUDCD3-209ENST00000487118 NAGKQ9UJ70 344 aa6.32□□□□□ -1.4
NUDCD3-209ENST00000487118 C5orf52A6NGY3 159 aa6.31□□□□□ -1.4
NUDCD3-209ENST00000487118 APCSP02743 223 aa6.31□□□□□ -1.4
NUDCD3-209ENST00000487118 RBMY1A1P0DJD3 496 aaKnown RBP6.31□□□□□ -1.4
NUDCD3-209ENST00000487118 RBMY1CP0DJD4 496 aa6.31□□□□□ -1.4
NUDCD3-209ENST00000487118 ASIPP42127 132 aa6.31□□□□□ -1.4
NUDCD3-209ENST00000487118 CACNG7P62955 275 aa6.31□□□□□ -1.4
NUDCD3-209ENST00000487118 RBMY1FQ15415 496 aaKnown RBP6.31□□□□□ -1.4
NUDCD3-209ENST00000487118 FAM159AQ6UWV7 190 aa6.31□□□□□ -1.4
NUDCD3-209ENST00000487118 STHQ8IWL8 128 aa6.31□□□□□ -1.4
NUDCD3-209ENST00000487118 LINC00467Q9BRT7 94 aa6.31□□□□□ -1.4
NUDCD3-209ENST00000487118 TPPP3Q9BW30 176 aa6.31□□□□□ -1.4
NUDCD3-209ENST00000487118 IGHV1OR15-1A0A075B7D0 117 aa6.3□□□□□ -1.4
NUDCD3-209ENST00000487118 H3BVH4 76 aa6.3□□□□□ -1.4
NUDCD3-209ENST00000487118 GNRH2O43555 120 aa6.3□□□□□ -1.4
NUDCD3-209ENST00000487118 NXPH4O95158 308 aa6.3□□□□□ -1.4
NUDCD3-209ENST00000487118 S100A6P06703 90 aa6.3□□□□□ -1.4
NUDCD3-209ENST00000487118 RNASE3P12724 160 aaKnown RBP6.3□□□□□ -1.4
NUDCD3-209ENST00000487118 NDUFA6P56556 154 aa6.3□□□□□ -1.4
NUDCD3-209ENST00000487118 FXYD7P58549 80 aa6.3□□□□□ -1.4
NUDCD3-209ENST00000487118 DMRTA1Q5VZB9 504 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms