RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 ZNF479Q96JC4 524 aa13.1□□□□□ -0.31
CLIP2-206ENST00000487091 KCNS1Q96KK3 526 aa13.1□□□□□ -0.31
CLIP2-206ENST00000487091 NDFIP1Q9BT67 221 aa13.1□□□□□ -0.31
CLIP2-206ENST00000487091 SH3BGRL3Q9H299 93 aa13.1□□□□□ -0.31
CLIP2-206ENST00000487091 BORCS7-ASMTA0A0B4J1R7 106 aa13.09□□□□□ -0.31
CLIP2-206ENST00000487091 TRAV4A0A0B4J268 109 aa13.09□□□□□ -0.31
CLIP2-206ENST00000487091 RNF222A6NCQ9 220 aa13.09□□□□□ -0.31
CLIP2-206ENST00000487091 C16orf90A8MZG2 172 aa13.09□□□□□ -0.31
CLIP2-206ENST00000487091 K7EQM0 130 aa13.09□□□□□ -0.31
CLIP2-206ENST00000487091 SFTA3P0C7M3 94 aa13.09□□□□□ -0.31
CLIP2-206ENST00000487091 LYPD5Q6UWN5 251 aa13.09□□□□□ -0.31
CLIP2-206ENST00000487091 SDF2L1Q9HCN8 221 aa13.09□□□□□ -0.31
CLIP2-206ENST00000487091 NXPH4O95158 308 aa13.08□□□□□ -0.32
CLIP2-206ENST00000487091 TYMSP04818 313 aa13.08□□□□□ -0.32
CLIP2-206ENST00000487091 SUMO1P63165 101 aaKnown RBP13.08□□□□□ -0.32
CLIP2-206ENST00000487091 RPL7L1Q6DKI1 246 aaKnown RBP13.08□□□□□ -0.32
CLIP2-206ENST00000487091 EPDR1Q9UM22 224 aa13.08□□□□□ -0.32
CLIP2-206ENST00000487091 PSG8Q9UQ74 426 aa13.08□□□□□ -0.32
CLIP2-206ENST00000487091 FXYD6-FXYD2A0A087WZ82 144 aa13.07□□□□□ -0.32
CLIP2-206ENST00000487091 FBLL1A6NHQ2 334 aaKnown RBP13.07□□□□□ -0.32
CLIP2-206ENST00000487091 K7EQD1 137 aa13.07□□□□□ -0.32
CLIP2-206ENST00000487091 ORM1P02763 201 aa13.07□□□□□ -0.32
CLIP2-206ENST00000487091 OR4C5Q8NGB2 326 aa13.07□□□□□ -0.32
CLIP2-206ENST00000487091 OR2T35Q8NGX2 323 aa13.07□□□□□ -0.32
CLIP2-206ENST00000487091 SGK494Q96LW2 274 aa13.07□□□□□ -0.32
CLIP2-206ENST00000487091 A0A1W2PRE2 83 aa13.06□□□□□ -0.32
CLIP2-206ENST00000487091 GGTLC3B5MD39 225 aa13.06□□□□□ -0.32
CLIP2-206ENST00000487091 TAAR5O14804 337 aa13.06□□□□□ -0.32
CLIP2-206ENST00000487091 SRIP30626 198 aa13.06□□□□□ -0.32
CLIP2-206ENST00000487091 PCNPQ8WW12 178 aaKnown RBP13.06□□□□□ -0.32
CLIP2-206ENST00000487091 IGLV2-11P01706 119 aa13.05□□□□□ -0.32
CLIP2-206ENST00000487091 GYPEP15421 78 aa13.05□□□□□ -0.32
CLIP2-206ENST00000487091 ZNF80P51504 273 aaPredicted RBP13.05□□□□□ -0.32
CLIP2-206ENST00000487091 LINC00315P59091 139 aa13.05□□□□□ -0.32
CLIP2-206ENST00000487091 FLI1Q01543 452 aaPredicted RBP13.05□□□□□ -0.32
CLIP2-206ENST00000487091 CYB561D1Q8N8Q1 229 aa13.05□□□□□ -0.32
CLIP2-206ENST00000487091 C9JCJ5 164 aa13.04□□□□□ -0.32
CLIP2-206ENST00000487091 PFN1P07737 140 aaKnown RBP13.04□□□□□ -0.32
CLIP2-206ENST00000487091 RGS21Q2M5E4 152 aa13.04□□□□□ -0.32
CLIP2-206ENST00000487091 SMUG1Q53HV7 270 aa13.04□□□□□ -0.32
CLIP2-206ENST00000487091 TMEM75Q8N9X5 138 aa13.04□□□□□ -0.32
CLIP2-206ENST00000487091 TXNDC17Q9BRA2 123 aa13.04□□□□□ -0.32
CLIP2-206ENST00000487091 CTXND1A0A1B0GTU2 59 aa13.03□□□□□ -0.32
CLIP2-206ENST00000487091 GCGP01275 180 aa13.03□□□□□ -0.32
CLIP2-206ENST00000487091 ZNF726P1Q15940 193 aa13.03□□□□□ -0.32
CLIP2-206ENST00000487091 ZFP69Q49AA0 526 aa13.03□□□□□ -0.32
CLIP2-206ENST00000487091 SAPCD1Q5SSQ6 148 aa13.03□□□□□ -0.32
CLIP2-206ENST00000487091 SPATA12Q7Z6I5 190 aa13.03□□□□□ -0.32
CLIP2-206ENST00000487091 C11orf21Q9P2W6 132 aa13.03□□□□□ -0.32
CLIP2-206ENST00000487091 G3V3Q6 166 aa13.02□□□□□ -0.33
CLIP2-206ENST00000487091 CIDEAO60543 219 aa13.02□□□□□ -0.33
CLIP2-206ENST00000487091 CDK2AP2O75956 126 aa13.02□□□□□ -0.33
CLIP2-206ENST00000487091 Q6ZRN7 208 aaPredicted RBP13.02□□□□□ -0.33
CLIP2-206ENST00000487091 SH2D6Q7Z4S9 175 aa13.02□□□□□ -0.33
CLIP2-206ENST00000487091 PRNTQ86SH4 94 aa13.02□□□□□ -0.33
CLIP2-206ENST00000487091 RYR1P21817 5038 aa13.02□□□□□ -0.33
CLIP2-206ENST00000487091 PCLOQ9Y6V0 5065 aa13.02□□□□□ -0.33
CLIP2-206ENST00000487091 TRAV9-2A0A087WT02 112 aa13.01□□□□□ -0.33
CLIP2-206ENST00000487091 K7EP13 123 aa13.01□□□□□ -0.33
CLIP2-206ENST00000487091 GATA1P15976 413 aaPredicted RBP13.01□□□□□ -0.33
CLIP2-206ENST00000487091 ZNF876PQ49A33 203 aa13.01□□□□□ -0.33
CLIP2-206ENST00000487091 AKR1C8PQ5T2L2 129 aa13.01□□□□□ -0.33
CLIP2-206ENST00000487091 PTH2Q96A98 100 aa13.01□□□□□ -0.33
CLIP2-206ENST00000487091 NKX6-2Q9C056 277 aaPredicted RBP13.01□□□□□ -0.33
CLIP2-206ENST00000487091 C9orf85Q96MD7 179 aa13□□□□□ -0.33
CLIP2-206ENST00000487091 LY96Q9Y6Y9 160 aa13□□□□□ -0.33
CLIP2-206ENST00000487091 LRP1BQ9NZR2 4599 aa13□□□□□ -0.33
CLIP2-206ENST00000487091 RS1O15537 224 aa12.99□□□□□ -0.33
CLIP2-206ENST00000487091 PPT1P50897 306 aa12.99□□□□□ -0.33
CLIP2-206ENST00000487091 NFE4Q86UQ8 179 aa12.99□□□□□ -0.33
CLIP2-206ENST00000487091 IFNA7P01567 189 aa12.98□□□□□ -0.33
CLIP2-206ENST00000487091 TIRAPP58753 221 aa12.98□□□□□ -0.33
CLIP2-206ENST00000487091 KRTAP10-2P60368 255 aa12.98□□□□□ -0.33
CLIP2-206ENST00000487091 CFAP126Q5VTH2 177 aa12.98□□□□□ -0.33
CLIP2-206ENST00000487091 LINC00479Q96M42 142 aa12.98□□□□□ -0.33
CLIP2-206ENST00000487091 CYTL1Q9NRR1 136 aa12.98□□□□□ -0.33
CLIP2-206ENST00000487091 TRAV34A0A0B4J273 112 aa12.97□□□□□ -0.33
CLIP2-206ENST00000487091 LOC100131303A0A0U1RQF7 123 aa12.97□□□□□ -0.33
CLIP2-206ENST00000487091 FAM74A7A6NL05 159 aa12.97□□□□□ -0.33
CLIP2-206ENST00000487091 PEX7O00628 323 aa12.97□□□□□ -0.33
CLIP2-206ENST00000487091 ARPC5O15511 151 aa12.97□□□□□ -0.33
CLIP2-206ENST00000487091 DNAH10OSP0CZ25 163 aa12.97□□□□□ -0.33
CLIP2-206ENST00000487091 RNASE3P12724 160 aaKnown RBP12.97□□□□□ -0.33
CLIP2-206ENST00000487091 EVI2AP22794 236 aa12.97□□□□□ -0.33
CLIP2-206ENST00000487091 UBE2G2P60604 165 aa12.97□□□□□ -0.33
CLIP2-206ENST00000487091 DPPA3Q6W0C5 159 aa12.97□□□□□ -0.33
CLIP2-206ENST00000487091 WFDC10BQ8IUB3 73 aa12.97□□□□□ -0.33
CLIP2-206ENST00000487091 HIST1H2BAQ96A08 127 aa12.97□□□□□ -0.33
CLIP2-206ENST00000487091 ARL2-SNX15V9GYD0 113 aa12.97□□□□□ -0.33
CLIP2-206ENST00000487091 TRBV6-4A0A1B0GX49 114 aa12.96□□□□□ -0.33
CLIP2-206ENST00000487091 FABP5P3A8MUU1 101 aa12.96□□□□□ -0.33
CLIP2-206ENST00000487091 FGF8P55075 233 aaPredicted RBP12.96□□□□□ -0.33
CLIP2-206ENST00000487091 SLC25A29Q8N8R3 303 aa12.96□□□□□ -0.33
CLIP2-206ENST00000487091 PRADC1Q9BSG0 188 aa12.96□□□□□ -0.33
CLIP2-206ENST00000487091 TNFRSF18Q9Y5U5 241 aa12.96□□□□□ -0.33
CLIP2-206ENST00000487091 HSPG2P98160 4391 aa12.95□□□□□ -0.34
CLIP2-206ENST00000487091 PGPEP1LA6NFU8 196 aa12.95□□□□□ -0.34
CLIP2-206ENST00000487091 ZNF506Q5JVG8 444 aa12.95□□□□□ -0.34
CLIP2-206ENST00000487091 PIK3CD-AS1Q5SR53 167 aa12.95□□□□□ -0.34
CLIP2-206ENST00000487091 NHLRC2Q8NBF2 726 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms