RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 ORMDL2Q53FV1 153 aa8.16□□□□□ -1.1
CCDC171-208ENST00000486641 ZGRF1Q86YA3 2104 aa8.16□□□□□ -1.1
CCDC171-208ENST00000486641 RNF5Q99942 180 aa8.16□□□□□ -1.1
CCDC171-208ENST00000486641 ONECUT1Q9UBC0 465 aa8.16□□□□□ -1.1
CCDC171-208ENST00000486641 KAAG1Q9UBP8 84 aa8.16□□□□□ -1.1
CCDC171-208ENST00000486641 FAM215AQ9Y5M1 114 aa8.16□□□□□ -1.1
CCDC171-208ENST00000486641 BOD1L1Q8NFC6 3051 aa8.16□□□□□ -1.1
CCDC171-208ENST00000486641 TRAV8-2A0A0B4J237 113 aa8.15□□□□□ -1.1
CCDC171-208ENST00000486641 IGHV3-35A0A0C4DH35 117 aa8.15□□□□□ -1.1
CCDC171-208ENST00000486641 GAGE12JA6NER3 117 aa8.15□□□□□ -1.1
CCDC171-208ENST00000486641 SLC25A20O43772 301 aa8.15□□□□□ -1.1
CCDC171-208ENST00000486641 GAGE7O76087 117 aa8.15□□□□□ -1.1
CCDC171-208ENST00000486641 GAGE12FP0CL80 117 aa8.15□□□□□ -1.1
CCDC171-208ENST00000486641 GAGE12GP0CL81 117 aa8.15□□□□□ -1.1
CCDC171-208ENST00000486641 GAGE12IP0CL82 117 aa8.15□□□□□ -1.1
CCDC171-208ENST00000486641 GAGE4Q13068 117 aa8.15□□□□□ -1.1
CCDC171-208ENST00000486641 Q6ZS46 218 aa8.15□□□□□ -1.1
CCDC171-208ENST00000486641 FAM110AQ9BQ89 295 aa8.15□□□□□ -1.1
CCDC171-208ENST00000486641 AGPAT4-IT1Q9H0P7 198 aa8.15□□□□□ -1.1
CCDC171-208ENST00000486641 C21orf62Q9NYP8 219 aa8.15□□□□□ -1.1
CCDC171-208ENST00000486641 ROS1P08922 2347 aa8.15□□□□□ -1.1
CCDC171-208ENST00000486641 TIMM23O14925 209 aa8.15□□□□□ -1.1
CCDC171-208ENST00000486641 CD59P13987 128 aa8.15□□□□□ -1.1
CCDC171-208ENST00000486641 C2orf66Q6UXQ4 117 aa8.15□□□□□ -1.1
CCDC171-208ENST00000486641 C10orf126Q8N4M7 172 aa8.15□□□□□ -1.1
CCDC171-208ENST00000486641 IGHV4-4A0A075B6R2 117 aa8.14□□□□□ -1.11
CCDC171-208ENST00000486641 C9JAW5 83 aa8.14□□□□□ -1.11
CCDC171-208ENST00000486641 LY6LH3BQJ8 138 aa8.14□□□□□ -1.11
CCDC171-208ENST00000486641 SNCGO76070 127 aa8.14□□□□□ -1.11
CCDC171-208ENST00000486641 IGHV3-30P01768 117 aa8.14□□□□□ -1.11
CCDC171-208ENST00000486641 CTSGP08311 255 aa8.14□□□□□ -1.11
CCDC171-208ENST00000486641 IGHV3-30-5P0DP03 117 aa8.14□□□□□ -1.11
CCDC171-208ENST00000486641 IGFL2Q6UWQ7 119 aa8.14□□□□□ -1.11
CCDC171-208ENST00000486641 TRPT1Q86TN4 253 aaKnown RBP8.14□□□□□ -1.11
CCDC171-208ENST00000486641 SMIM20Q8N5G0 67 aa8.14□□□□□ -1.11
CCDC171-208ENST00000486641 NBR2O15453 112 aa8.14□□□□□ -1.11
CCDC171-208ENST00000486641 SPRY2O43597 315 aa8.14□□□□□ -1.11
CCDC171-208ENST00000486641 CRYGDP07320 174 aa8.14□□□□□ -1.11
CCDC171-208ENST00000486641 IFITM1P13164 125 aa8.14□□□□□ -1.11
CCDC171-208ENST00000486641 SUMO2P61956 95 aaKnown RBP8.14□□□□□ -1.11
CCDC171-208ENST00000486641 RPL32P62910 135 aaKnown RBP8.14□□□□□ -1.11
CCDC171-208ENST00000486641 TTC32Q5I0X7 151 aa8.14□□□□□ -1.11
CCDC171-208ENST00000486641 RPL39LQ96EH5 51 aaKnown RBP8.14□□□□□ -1.11
CCDC171-208ENST00000486641 SLC50A1Q9BRV3 221 aa8.14□□□□□ -1.11
CCDC171-208ENST00000486641 ARRDC1-AS1Q9H2J1 176 aa8.14□□□□□ -1.11
CCDC171-208ENST00000486641 PRO1854Q9UHT4 67 aa8.14□□□□□ -1.11
CCDC171-208ENST00000486641 RBAKDNA6NC62 111 aa8.13□□□□□ -1.11
CCDC171-208ENST00000486641 ASIPP42127 132 aa8.13□□□□□ -1.11
CCDC171-208ENST00000486641 EMP1P54849 157 aa8.13□□□□□ -1.11
CCDC171-208ENST00000486641 RAX2Q96IS3 184 aa8.13□□□□□ -1.11
CCDC171-208ENST00000486641 MSRB2Q9Y3D2 182 aa8.13□□□□□ -1.11
CCDC171-208ENST00000486641 C11orf86A6NJI1 115 aa8.13□□□□□ -1.11
CCDC171-208ENST00000486641 ZNF883P0CG24 379 aa8.13□□□□□ -1.11
CCDC171-208ENST00000486641 TECTAO75443 2155 aa8.13□□□□□ -1.11
CCDC171-208ENST00000486641 TRIOBPQ9H2D6 2365 aa8.13□□□□□ -1.11
CCDC171-208ENST00000486641 RNF223E7ERA6 249 aa8.12□□□□□ -1.11
CCDC171-208ENST00000486641 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.12□□□□□ -1.11
CCDC171-208ENST00000486641 C1orf210Q8IVY1 113 aa8.12□□□□□ -1.11
CCDC171-208ENST00000486641 IGLV4-69A0A075B6H9 119 aa8.12□□□□□ -1.11
CCDC171-208ENST00000486641 IGHV3-66A0A0C4DH42 116 aa8.12□□□□□ -1.11
CCDC171-208ENST00000486641 TSPEAR-AS2P59090 65 aa8.12□□□□□ -1.11
CCDC171-208ENST00000486641 BSPH1Q075Z2 132 aa8.12□□□□□ -1.11
CCDC171-208ENST00000486641 PIP4P1Q86T03 277 aa8.12□□□□□ -1.11
CCDC171-208ENST00000486641 Q8N1Y9 231 aa8.12□□□□□ -1.11
CCDC171-208ENST00000486641 SLC25A29Q8N8R3 303 aa8.12□□□□□ -1.11
CCDC171-208ENST00000486641 NPBQ8NG41 125 aa8.11□□□□□ -1.11
CCDC171-208ENST00000486641 NTN5Q8WTR8 489 aaPredicted RBP8.11□□□□□ -1.11
CCDC171-208ENST00000486641 M0QXV9 152 aa8.11□□□□□ -1.11
CCDC171-208ENST00000486641 EIF4EBP3O60516 100 aaPredicted RBP8.11□□□□□ -1.11
CCDC171-208ENST00000486641 DUSP14O95147 198 aaKnown RBP8.11□□□□□ -1.11
CCDC171-208ENST00000486641 TSHBP01222 138 aa8.11□□□□□ -1.11
CCDC171-208ENST00000486641 NDPQ00604 133 aa8.11□□□□□ -1.11
CCDC171-208ENST00000486641 FAM159AQ6UWV7 190 aa8.11□□□□□ -1.11
CCDC171-208ENST00000486641 RNASE6Q93091 150 aaKnown RBP8.11□□□□□ -1.11
CCDC171-208ENST00000486641 M0R381 172 aa8.1□□□□□ -1.11
CCDC171-208ENST00000486641 BUB3O43684 328 aa8.1□□□□□ -1.11
CCDC171-208ENST00000486641 Q6Q795 121 aa8.1□□□□□ -1.11
CCDC171-208ENST00000486641 C14orf178Q8N769 122 aaPredicted RBP8.1□□□□□ -1.11
CCDC171-208ENST00000486641 ODF3Q96PU9 254 aa8.1□□□□□ -1.11
CCDC171-208ENST00000486641 PKDREJQ9NTG1 2253 aa8.1□□□□□ -1.11
CCDC171-208ENST00000486641 IGHV3OR16-13A0A075B7E8 117 aa8.09□□□□□ -1.11
CCDC171-208ENST00000486641 IGHV3-74A0A0B4J1X5 117 aa8.09□□□□□ -1.11
CCDC171-208ENST00000486641 HES1Q14469 280 aa8.09□□□□□ -1.11
CCDC171-208ENST00000486641 DEFB104AQ8WTQ1 72 aa8.09□□□□□ -1.11
CCDC171-208ENST00000486641 TIMD4Q96H15 378 aa8.09□□□□□ -1.11
CCDC171-208ENST00000486641 CENPVL3A0A0U1RRI6 287 aa8.09□□□□□ -1.11
CCDC171-208ENST00000486641 TEX49A0A1B0GTD5 131 aa8.09□□□□□ -1.11
CCDC171-208ENST00000486641 A4D1N5 150 aa8.09□□□□□ -1.11
CCDC171-208ENST00000486641 LYNX1G3V0Z9 82 aa8.09□□□□□ -1.11
CCDC171-208ENST00000486641 H7C2G1 150 aa8.09□□□□□ -1.11
CCDC171-208ENST00000486641 IGHV3-33P01772 117 aa8.09□□□□□ -1.11
CCDC171-208ENST00000486641 ELANEP08246 267 aa8.09□□□□□ -1.11
CCDC171-208ENST00000486641 LYNX1P0DP58 116 aa8.09□□□□□ -1.11
CCDC171-208ENST00000486641 HERVK_113P61574 105 aa8.09□□□□□ -1.11
CCDC171-208ENST00000486641 PRR9Q5T870 116 aa8.09□□□□□ -1.11
CCDC171-208ENST00000486641 TMEM95Q3KNT9 176 aa8.08□□□□□ -1.12
CCDC171-208ENST00000486641 C15orf53Q8NAA6 179 aa8.08□□□□□ -1.12
CCDC171-208ENST00000486641 AMELXQ99217 191 aa8.08□□□□□ -1.12
CCDC171-208ENST00000486641 DYNLRB1Q9NP97 96 aa8.08□□□□□ -1.12
CCDC171-208ENST00000486641 J3KRW8 73 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms