RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 C2CD4CQ8TF44 421 aa5.95□□□□□ -1.46
SF3A1-208ENST00000485618 SPXQ9BT56 116 aa5.95□□□□□ -1.46
SF3A1-208ENST00000485618 DKK2Q9UBU2 259 aa5.95□□□□□ -1.46
SF3A1-208ENST00000485618 TENM2Q9NT68 2774 aa5.94□□□□□ -1.46
SF3A1-208ENST00000485618 TRAV10A0A0B4J240 114 aa5.94□□□□□ -1.46
SF3A1-208ENST00000485618 XKRY2A2RUG3 117 aa5.94□□□□□ -1.46
SF3A1-208ENST00000485618 KIR3DS1Q14943 382 aa5.94□□□□□ -1.46
SF3A1-208ENST00000485618 LGALS9BQ3B8N2 356 aa5.94□□□□□ -1.46
SF3A1-208ENST00000485618 FAM222AQ5U5X8 452 aa5.94□□□□□ -1.46
SF3A1-208ENST00000485618 RNASE8Q8TDE3 154 aaKnown RBP5.94□□□□□ -1.46
SF3A1-208ENST00000485618 NOP10Q9NPE3 64 aaKnown RBP5.94□□□□□ -1.46
SF3A1-208ENST00000485618 TRGV2A0A075B6R0 118 aa5.93□□□□□ -1.46
SF3A1-208ENST00000485618 DEFB130BP0DP73 79 aa5.93□□□□□ -1.46
SF3A1-208ENST00000485618 DEFB130AP0DP74 79 aa5.93□□□□□ -1.46
SF3A1-208ENST00000485618 AZU1P20160 251 aa5.93□□□□□ -1.46
SF3A1-208ENST00000485618 TCTAP57738 103 aa5.93□□□□□ -1.46
SF3A1-208ENST00000485618 OR5I1Q13606 314 aa5.93□□□□□ -1.46
SF3A1-208ENST00000485618 FAM74A3Q4VXF1 159 aa5.93□□□□□ -1.46
SF3A1-208ENST00000485618 CENPWQ5EE01 88 aa5.93□□□□□ -1.46
SF3A1-208ENST00000485618 TOR2AQ5JU69 321 aa5.93□□□□□ -1.46
SF3A1-208ENST00000485618 MUC21Q5SSG8 566 aa5.93□□□□□ -1.46
SF3A1-208ENST00000485618 CEMP1Q6PRD7 247 aaPredicted RBP5.93□□□□□ -1.46
SF3A1-208ENST00000485618 PHLDA1Q8WV24 401 aaPredicted RBP5.93□□□□□ -1.46
SF3A1-208ENST00000485618 TVP23CQ96ET8 276 aa5.93□□□□□ -1.46
SF3A1-208ENST00000485618 FAM210BQ96KR6 192 aa5.93□□□□□ -1.46
SF3A1-208ENST00000485618 FAM210AQ96ND0 272 aa5.93□□□□□ -1.46
SF3A1-208ENST00000485618 C8orf49Q96NF6 230 aa5.93□□□□□ -1.46
SF3A1-208ENST00000485618 TP53TG3Q9ULZ0 132 aa5.93□□□□□ -1.46
SF3A1-208ENST00000485618 DEFB131BA0A096LNP1 70 aa5.92□□□□□ -1.46
SF3A1-208ENST00000485618 B4DEV8 164 aa5.92□□□□□ -1.46
SF3A1-208ENST00000485618 M0R2P5 195 aa5.92□□□□□ -1.46
SF3A1-208ENST00000485618 ATP5G1P05496 136 aa5.92□□□□□ -1.46
SF3A1-208ENST00000485618 MGST1P10620 155 aaKnown RBP5.92□□□□□ -1.46
SF3A1-208ENST00000485618 ASIPP42127 132 aa5.92□□□□□ -1.46
SF3A1-208ENST00000485618 CEBPGP53567 150 aa5.92□□□□□ -1.46
SF3A1-208ENST00000485618 TCL1AP56279 114 aa5.92□□□□□ -1.46
SF3A1-208ENST00000485618 NANOS2P60321 138 aaKnown RBP5.92□□□□□ -1.46
SF3A1-208ENST00000485618 RPS20P60866 119 aaKnown RBP5.92□□□□□ -1.46
SF3A1-208ENST00000485618 SLAQ13239 276 aa5.92□□□□□ -1.46
SF3A1-208ENST00000485618 ZNF674Q2M3X9 581 aa5.92□□□□□ -1.46
SF3A1-208ENST00000485618 PRR9Q5T870 116 aa5.92□□□□□ -1.46
SF3A1-208ENST00000485618 NDUFAF3Q9BU61 184 aa5.92□□□□□ -1.46
SF3A1-208ENST00000485618 GSN-AS1Q9NRJ2 163 aa5.92□□□□□ -1.46
SF3A1-208ENST00000485618 TRGV1A0A0A0MS02 117 aa5.91□□□□□ -1.46
SF3A1-208ENST00000485618 ZNF727A8MUV8 499 aa5.91□□□□□ -1.46
SF3A1-208ENST00000485618 C9JCJ5 164 aa5.91□□□□□ -1.46
SF3A1-208ENST00000485618 CIDEAO60543 219 aa5.91□□□□□ -1.46
SF3A1-208ENST00000485618 SH2D1AO60880 128 aa5.91□□□□□ -1.46
SF3A1-208ENST00000485618 C12orf74Q32Q52 190 aa5.91□□□□□ -1.46
SF3A1-208ENST00000485618 SYT8Q8NBV8 401 aa5.91□□□□□ -1.46
SF3A1-208ENST00000485618 ZC2HC1AQ96GY0 325 aa5.91□□□□□ -1.46
SF3A1-208ENST00000485618 SMIM7Q9BQ49 75 aa5.91□□□□□ -1.46
SF3A1-208ENST00000485618 MLST8Q9BVC4 326 aa5.91□□□□□ -1.46
SF3A1-208ENST00000485618 LY96Q9Y6Y9 160 aa5.91□□□□□ -1.46
SF3A1-208ENST00000485618 IGHV3-16A0A0C4DH30 117 aa5.9□□□□□ -1.46
SF3A1-208ENST00000485618 GAGE12BA1L429 117 aa5.9□□□□□ -1.46
SF3A1-208ENST00000485618 RAB19A4D1S5 217 aa5.9□□□□□ -1.46
SF3A1-208ENST00000485618 GNRH2O43555 120 aa5.9□□□□□ -1.46
SF3A1-208ENST00000485618 SPINK4O60575 86 aa5.9□□□□□ -1.46
SF3A1-208ENST00000485618 GAGE7O76087 117 aa5.9□□□□□ -1.46
SF3A1-208ENST00000485618 P01737 135 aa5.9□□□□□ -1.46
SF3A1-208ENST00000485618 PRM2P04554 102 aa5.9□□□□□ -1.46
SF3A1-208ENST00000485618 CXCL1P09341 107 aa5.9□□□□□ -1.46
SF3A1-208ENST00000485618 GAGE12FP0CL80 117 aa5.9□□□□□ -1.46
SF3A1-208ENST00000485618 GAGE12GP0CL81 117 aa5.9□□□□□ -1.46
SF3A1-208ENST00000485618 GAGE12IP0CL82 117 aa5.9□□□□□ -1.46
SF3A1-208ENST00000485618 HTN3P15516 51 aa5.9□□□□□ -1.46
SF3A1-208ENST00000485618 ZNF80P51504 273 aaPredicted RBP5.9□□□□□ -1.46
SF3A1-208ENST00000485618 LINC01559Q495D7 138 aa5.9□□□□□ -1.46
SF3A1-208ENST00000485618 SOHLH1Q5JUK2 328 aa5.9□□□□□ -1.46
SF3A1-208ENST00000485618 CLLU1Q5K131 121 aa5.9□□□□□ -1.46
SF3A1-208ENST00000485618 PIK3CD-AS1Q5SR53 167 aa5.9□□□□□ -1.46
SF3A1-208ENST00000485618 PRR27Q6MZM9 219 aa5.9□□□□□ -1.46
SF3A1-208ENST00000485618 Q6ZTC4 211 aa5.9□□□□□ -1.46
SF3A1-208ENST00000485618 C11orf72Q8NBR9 251 aa5.9□□□□□ -1.46
SF3A1-208ENST00000485618 PTH2Q96A98 100 aa5.9□□□□□ -1.46
SF3A1-208ENST00000485618 PARLQ9H300 379 aa5.9□□□□□ -1.46
SF3A1-208ENST00000485618 PHLDA3Q9Y5J5 127 aa5.9□□□□□ -1.46
SF3A1-208ENST00000485618 STARD9Q9P2P6 4700 aa5.89□□□□□ -1.47
SF3A1-208ENST00000485618 DNAH7Q8WXX0 4024 aa5.89□□□□□ -1.47
SF3A1-208ENST00000485618 PLAC8L1A1L4L8 177 aa5.89□□□□□ -1.47
SF3A1-208ENST00000485618 IGLL5B9A064 214 aa5.89□□□□□ -1.47
SF3A1-208ENST00000485618 KRBOX1C9JBD0 128 aa5.89□□□□□ -1.47
SF3A1-208ENST00000485618 F5H768 121 aa5.89□□□□□ -1.47
SF3A1-208ENST00000485618 M0R036 132 aa5.89□□□□□ -1.47
SF3A1-208ENST00000485618 TYMSP04818 313 aa5.89□□□□□ -1.47
SF3A1-208ENST00000485618 TMEM241Q24JQ0 296 aa5.89□□□□□ -1.47
SF3A1-208ENST00000485618 ZNF876PQ49A33 203 aa5.89□□□□□ -1.47
SF3A1-208ENST00000485618 NHLRC2Q8NBF2 726 aa5.89□□□□□ -1.47
SF3A1-208ENST00000485618 RASL10AQ92737 203 aa5.89□□□□□ -1.47
SF3A1-208ENST00000485618 C18orf15Q96N68 181 aa5.89□□□□□ -1.47
SF3A1-208ENST00000485618 LYSTQ99698 3801 aa5.89□□□□□ -1.47
SF3A1-208ENST00000485618 DERL1Q9BUN8 251 aa5.89□□□□□ -1.47
SF3A1-208ENST00000485618 IL36BQ9NZH7 164 aa5.89□□□□□ -1.47
SF3A1-208ENST00000485618 MDFICQ9P1T7 246 aa5.89□□□□□ -1.47
SF3A1-208ENST00000485618 CELA1Q9UNI1 258 aa5.89□□□□□ -1.47
SF3A1-208ENST00000485618 A0A1W2PPQ1 181 aa5.88□□□□□ -1.47
SF3A1-208ENST00000485618 A8MWV9 139 aa5.88□□□□□ -1.47
SF3A1-208ENST00000485618 F2Z2F3 143 aa5.88□□□□□ -1.47
SF3A1-208ENST00000485618 SRP19P09132 144 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms