RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 SH2D1AO60880 128 aa14.24□□□□□ -0.13
COL6A2-208ENST00000485591 SRP19P09132 144 aaKnown RBP14.24□□□□□ -0.13
COL6A2-208ENST00000485591 SMDT1Q9H4I9 107 aa14.24□□□□□ -0.13
COL6A2-208ENST00000485591 SDF2L1Q9HCN8 221 aa14.24□□□□□ -0.13
COL6A2-208ENST00000485591 TIMM8BQ9Y5J9 83 aaPredicted RBP14.24□□□□□ -0.13
COL6A2-208ENST00000485591 LYRM9A8MSI8 78 aa14.23□□□□□ -0.13
COL6A2-208ENST00000485591 SNURFLB1AK76 121 aa14.23□□□□□ -0.13
COL6A2-208ENST00000485591 C9JCJ5 164 aa14.23□□□□□ -0.13
COL6A2-208ENST00000485591 IGLV2-8P01709 118 aa14.23□□□□□ -0.13
COL6A2-208ENST00000485591 PEA15Q15121 130 aa14.23□□□□□ -0.13
COL6A2-208ENST00000485591 TYMSP04818 313 aa14.22□□□□□ -0.13
COL6A2-208ENST00000485591 TCL1AP56279 114 aa14.22□□□□□ -0.13
COL6A2-208ENST00000485591 NANOS2P60321 138 aaKnown RBP14.22□□□□□ -0.13
COL6A2-208ENST00000485591 ZNF415Q09FC8 603 aa14.22□□□□□ -0.13
COL6A2-208ENST00000485591 MUC7Q8TAX7 377 aa14.22□□□□□ -0.13
COL6A2-208ENST00000485591 GSN-AS1Q9NRJ2 163 aa14.22□□□□□ -0.13
COL6A2-208ENST00000485591 CEBPGP53567 150 aa14.21□□□□□ -0.13
COL6A2-208ENST00000485591 SRSF3P84103 164 aaKnown RBP14.21□□□□□ -0.13
COL6A2-208ENST00000485591 DAZ2Q13117 558 aaKnown RBP14.21□□□□□ -0.13
COL6A2-208ENST00000485591 NOP10Q9NPE3 64 aaKnown RBP14.21□□□□□ -0.13
COL6A2-208ENST00000485591 IGKV3D-20A0A0C4DH25 116 aa14.2□□□□□ -0.14
COL6A2-208ENST00000485591 IGHV3-16A0A0C4DH30 117 aa14.2□□□□□ -0.14
COL6A2-208ENST00000485591 PGPEP1LA6NFU8 196 aa14.2□□□□□ -0.14
COL6A2-208ENST00000485591 GNRH2O43555 120 aa14.2□□□□□ -0.14
COL6A2-208ENST00000485591 C12orf74Q32Q52 190 aa14.2□□□□□ -0.14
COL6A2-208ENST00000485591 MDFICQ9P1T7 246 aa14.2□□□□□ -0.14
COL6A2-208ENST00000485591 C9JQL5 133 aa14.19□□□□□ -0.14
COL6A2-208ENST00000485591 ORM1P02763 201 aa14.19□□□□□ -0.14
COL6A2-208ENST00000485591 MGST1P10620 155 aaKnown RBP14.19□□□□□ -0.14
COL6A2-208ENST00000485591 LINC01559Q495D7 138 aa14.19□□□□□ -0.14
COL6A2-208ENST00000485591 PRR27Q6MZM9 219 aa14.19□□□□□ -0.14
COL6A2-208ENST00000485591 KRBOX1C9JBD0 128 aa14.18□□□□□ -0.14
COL6A2-208ENST00000485591 LINC00612Q8N6U2 182 aa14.18□□□□□ -0.14
COL6A2-208ENST00000485591 SMIM7Q9BQ49 75 aa14.18□□□□□ -0.14
COL6A2-208ENST00000485591 BIN3Q9NQY0 253 aa14.18□□□□□ -0.14
COL6A2-208ENST00000485591 ZNF727A8MUV8 499 aa14.17□□□□□ -0.14
COL6A2-208ENST00000485591 B4DEV8 164 aa14.17□□□□□ -0.14
COL6A2-208ENST00000485591 M0R036 132 aa14.17□□□□□ -0.14
COL6A2-208ENST00000485591 DAD1P61803 113 aa14.17□□□□□ -0.14
COL6A2-208ENST00000485591 Q6ZTC4 211 aa14.17□□□□□ -0.14
COL6A2-208ENST00000485591 LY96Q9Y6Y9 160 aa14.17□□□□□ -0.14
COL6A2-208ENST00000485591 SPINK4O60575 86 aa14.16□□□□□ -0.14
COL6A2-208ENST00000485591 OCC1Q8TAD7 63 aa14.16□□□□□ -0.14
COL6A2-208ENST00000485591 SPXQ9BT56 116 aa14.16□□□□□ -0.14
COL6A2-208ENST00000485591 C19orf71A6NCJ1 209 aa14.15□□□□□ -0.14
COL6A2-208ENST00000485591 C3orf84H3BNL1 204 aa14.15□□□□□ -0.14
COL6A2-208ENST00000485591 DEFB130BP0DP73 79 aa14.15□□□□□ -0.14
COL6A2-208ENST00000485591 DEFB130AP0DP74 79 aa14.15□□□□□ -0.14
COL6A2-208ENST00000485591 LGALS9BQ3B8N2 356 aa14.15□□□□□ -0.14
COL6A2-208ENST00000485591 FAM74A3Q4VXF1 159 aa14.15□□□□□ -0.14
COL6A2-208ENST00000485591 DNLZQ5SXM8 178 aa14.15□□□□□ -0.14
COL6A2-208ENST00000485591 K7EN84 100 aa14.14□□□□□ -0.15
COL6A2-208ENST00000485591 RNASE3P12724 160 aaKnown RBP14.14□□□□□ -0.15
COL6A2-208ENST00000485591 ASIPP42127 132 aa14.14□□□□□ -0.15
COL6A2-208ENST00000485591 Q6ZTI0 123 aa14.14□□□□□ -0.15
COL6A2-208ENST00000485591 PHLDA1Q8WV24 401 aaPredicted RBP14.14□□□□□ -0.15
COL6A2-208ENST00000485591 C9orf85Q96MD7 179 aa14.14□□□□□ -0.15
COL6A2-208ENST00000485591 TRGV1A0A0A0MS02 117 aa14.13□□□□□ -0.15
COL6A2-208ENST00000485591 TRAV10A0A0B4J240 114 aa14.13□□□□□ -0.15
COL6A2-208ENST00000485591 GAGE12BA1L429 117 aa14.13□□□□□ -0.15
COL6A2-208ENST00000485591 GAGE7O76087 117 aa14.13□□□□□ -0.15
COL6A2-208ENST00000485591 CXCL1P09341 107 aa14.13□□□□□ -0.15
COL6A2-208ENST00000485591 GAGE12FP0CL80 117 aa14.13□□□□□ -0.15
COL6A2-208ENST00000485591 GAGE12GP0CL81 117 aa14.13□□□□□ -0.15
COL6A2-208ENST00000485591 GAGE12IP0CL82 117 aa14.13□□□□□ -0.15
COL6A2-208ENST00000485591 OR5I1Q13606 314 aa14.13□□□□□ -0.15
COL6A2-208ENST00000485591 ZNF575Q86XF7 245 aa14.13□□□□□ -0.15
COL6A2-208ENST00000485591 DAZAP1Q96EP5 407 aaKnown RBP14.13□□□□□ -0.15
COL6A2-208ENST00000485591 MRPL16Q9NX20 251 aaKnown RBP14.13□□□□□ -0.15
COL6A2-208ENST00000485591 DNAH7Q8WXX0 4024 aa14.12□□□□□ -0.15
COL6A2-208ENST00000485591 TMSB15BA0A087X1C1 80 aa14.12□□□□□ -0.15
COL6A2-208ENST00000485591 NUPR2A6NF83 97 aa14.12□□□□□ -0.15
COL6A2-208ENST00000485591 S100A4P26447 101 aaKnown RBP14.12□□□□□ -0.15
COL6A2-208ENST00000485591 RPL19P84098 196 aaKnown RBP14.12□□□□□ -0.15
COL6A2-208ENST00000485591 ZFAND6Q6FIF0 208 aa14.12□□□□□ -0.15
COL6A2-208ENST00000485591 C18orf15Q96N68 181 aa14.12□□□□□ -0.15
COL6A2-208ENST00000485591 IL36BQ9NZH7 164 aa14.12□□□□□ -0.15
COL6A2-208ENST00000485591 GRIFINA4D1Z8 144 aa14.11□□□□□ -0.15
COL6A2-208ENST00000485591 M0R2P5 195 aa14.11□□□□□ -0.15
COL6A2-208ENST00000485591 P01737 135 aa14.11□□□□□ -0.15
COL6A2-208ENST00000485591 SOHLH1Q5JUK2 328 aa14.11□□□□□ -0.15
COL6A2-208ENST00000485591 LINC01551Q86U37 167 aa14.11□□□□□ -0.15
COL6A2-208ENST00000485591 RASL10AQ92737 203 aa14.11□□□□□ -0.15
COL6A2-208ENST00000485591 MUC4Q99102 2169 aa14.11□□□□□ -0.15
COL6A2-208ENST00000485591 H3BVH4 76 aa14.1□□□□□ -0.15
COL6A2-208ENST00000485591 CASC10Q5T4H9 136 aa14.1□□□□□ -0.15
COL6A2-208ENST00000485591 CEMP1Q6PRD7 247 aaPredicted RBP14.1□□□□□ -0.15
COL6A2-208ENST00000485591 TRGV2A0A075B6R0 118 aa14.09□□□□□ -0.15
COL6A2-208ENST00000485591 DEFB131BA0A096LNP1 70 aa14.09□□□□□ -0.15
COL6A2-208ENST00000485591 ATP5G1P05496 136 aa14.09□□□□□ -0.15
COL6A2-208ENST00000485591 SFTA3P0C7M3 94 aa14.09□□□□□ -0.15
COL6A2-208ENST00000485591 MED14OSP0DP75 135 aa14.09□□□□□ -0.15
COL6A2-208ENST00000485591 TMEM241Q24JQ0 296 aa14.09□□□□□ -0.15
COL6A2-208ENST00000485591 UQCC3Q6UW78 93 aa14.09□□□□□ -0.15
COL6A2-208ENST00000485591 FAM231DQ6ZW35 169 aa14.09□□□□□ -0.15
COL6A2-208ENST00000485591 NUDT10Q8NFP7 164 aa14.09□□□□□ -0.15
COL6A2-208ENST00000485591 OR2D3Q8NGH3 330 aa14.09□□□□□ -0.15
COL6A2-208ENST00000485591 PTH2Q96A98 100 aa14.09□□□□□ -0.15
COL6A2-208ENST00000485591 NUDT11Q96G61 164 aa14.09□□□□□ -0.15
COL6A2-208ENST00000485591 NAT8Q9UHE5 227 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms