RNA–Protein interactions for RNA: ENST00000484236.1

SHROOM3-206, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-206ENST00000484236 TNFRSF6BO95407 300 aa5.58□□□□□ -1.52
SHROOM3-206ENST00000484236 LGALS1P09382 135 aaKnown RBP5.58□□□□□ -1.52
SHROOM3-206ENST00000484236 FCER1GP30273 86 aa5.58□□□□□ -1.52
SHROOM3-206ENST00000484236 RPL11P62913 178 aaKnown RBP5.58□□□□□ -1.52
SHROOM3-206ENST00000484236 SPANXN1Q5VSR9 72 aa5.58□□□□□ -1.52
SHROOM3-206ENST00000484236 Q8N8P6 123 aa5.58□□□□□ -1.52
SHROOM3-206ENST00000484236 OR1N2Q8NGR9 330 aa5.58□□□□□ -1.52
SHROOM3-206ENST00000484236 DCANP1Q8TF63 244 aa5.58□□□□□ -1.52
SHROOM3-206ENST00000484236 UBE2E2Q96LR5 201 aa5.58□□□□□ -1.52
SHROOM3-206ENST00000484236 SCRT2Q9NQ03 307 aa5.58□□□□□ -1.52
SHROOM3-206ENST00000484236 MSRB1Q9NZV6 116 aa5.58□□□□□ -1.52
SHROOM3-206ENST00000484236 USP24Q9UPU5 2620 aa5.57□□□□□ -1.52
SHROOM3-206ENST00000484236 MUC21A0A0G2JKD1 596 aa5.57□□□□□ -1.52
SHROOM3-206ENST00000484236 MUC21A0A140T8X8 626 aa5.57□□□□□ -1.52
SHROOM3-206ENST00000484236 KLLNB2CW77 178 aa5.57□□□□□ -1.52
SHROOM3-206ENST00000484236 K7EMI3 77 aa5.57□□□□□ -1.52
SHROOM3-206ENST00000484236 TCAPO15273 167 aa5.57□□□□□ -1.52
SHROOM3-206ENST00000484236 PPP1R17O96001 155 aa5.57□□□□□ -1.52
SHROOM3-206ENST00000484236 LEPP41159 167 aa5.57□□□□□ -1.52
SHROOM3-206ENST00000484236 ASIPP42127 132 aa5.57□□□□□ -1.52
SHROOM3-206ENST00000484236 MAJINQ3KP22 176 aa5.57□□□□□ -1.52
SHROOM3-206ENST00000484236 Q5PR19 223 aa5.57□□□□□ -1.52
SHROOM3-206ENST00000484236 MUC21Q5SSG8 566 aa5.57□□□□□ -1.52
SHROOM3-206ENST00000484236 PRR9Q5T870 116 aa5.57□□□□□ -1.52
SHROOM3-206ENST00000484236 SLC25A34Q6PIV7 304 aa5.57□□□□□ -1.52
SHROOM3-206ENST00000484236 Q8N2B8 174 aa5.57□□□□□ -1.52
SHROOM3-206ENST00000484236 TMEM86BQ8N661 226 aa5.57□□□□□ -1.52
SHROOM3-206ENST00000484236 OR2K2Q8NGT1 345 aa5.57□□□□□ -1.52
SHROOM3-206ENST00000484236 IFI27L1Q96BM0 104 aa5.57□□□□□ -1.52
SHROOM3-206ENST00000484236 ANKRD17O75179 2603 aaKnown RBP5.57□□□□□ -1.52
SHROOM3-206ENST00000484236 MYO18BQ8IUG5 2567 aa5.57□□□□□ -1.52
SHROOM3-206ENST00000484236 FLNCQ14315 2725 aa5.56□□□□□ -1.52
SHROOM3-206ENST00000484236 IGLV2-18A0A075B6J9 118 aa5.56□□□□□ -1.52
SHROOM3-206ENST00000484236 A1L4Q6 167 aa5.56□□□□□ -1.52
SHROOM3-206ENST00000484236 SMKR1H3BMG3 65 aa5.56□□□□□ -1.52
SHROOM3-206ENST00000484236 H3BVH4 76 aa5.56□□□□□ -1.52
SHROOM3-206ENST00000484236 M0R381 172 aa5.56□□□□□ -1.52
SHROOM3-206ENST00000484236 ATP5LO75964 103 aa5.56□□□□□ -1.52
SHROOM3-206ENST00000484236 NXPH4O95158 308 aa5.56□□□□□ -1.52
SHROOM3-206ENST00000484236 NCR2O95944 276 aa5.56□□□□□ -1.52
SHROOM3-206ENST00000484236 EVI2AP22794 236 aa5.56□□□□□ -1.52
SHROOM3-206ENST00000484236 S100A4P26447 101 aaKnown RBP5.56□□□□□ -1.52
SHROOM3-206ENST00000484236 SNRPD3P62318 126 aaKnown RBP5.56□□□□□ -1.52
SHROOM3-206ENST00000484236 TMEM95Q3KNT9 176 aa5.56□□□□□ -1.52
SHROOM3-206ENST00000484236 LCNL1Q6ZST4 164 aa5.56□□□□□ -1.52
SHROOM3-206ENST00000484236 NRACQ8N912 160 aa5.56□□□□□ -1.52
SHROOM3-206ENST00000484236 C20orf78Q9BR46 151 aa5.56□□□□□ -1.52
SHROOM3-206ENST00000484236 DPH3P1Q9H4G8 78 aa5.56□□□□□ -1.52
SHROOM3-206ENST00000484236 ZNF702PQ9H963 129 aa5.56□□□□□ -1.52
SHROOM3-206ENST00000484236 GOLT1BQ9Y3E0 138 aa5.56□□□□□ -1.52
SHROOM3-206ENST00000484236 PHLDA3Q9Y5J5 127 aa5.56□□□□□ -1.52
SHROOM3-206ENST00000484236 CSPG4Q6UVK1 2322 aa5.56□□□□□ -1.52
SHROOM3-206ENST00000484236 hDV102S1A0JD36 115 aa5.55□□□□□ -1.52
SHROOM3-206ENST00000484236 K7EQG2 157 aa5.55□□□□□ -1.52
SHROOM3-206ENST00000484236 HOXA3O43365 443 aaPredicted RBP5.55□□□□□ -1.52
SHROOM3-206ENST00000484236 DUSP14O95147 198 aaKnown RBP5.55□□□□□ -1.52
SHROOM3-206ENST00000484236 COX8AP10176 69 aa5.55□□□□□ -1.52
SHROOM3-206ENST00000484236 RNASE4P34096 147 aaKnown RBP5.55□□□□□ -1.52
SHROOM3-206ENST00000484236 GAGE1Q13065 139 aa5.55□□□□□ -1.52
SHROOM3-206ENST00000484236 LAGE3Q14657 143 aa5.55□□□□□ -1.52
SHROOM3-206ENST00000484236 KIR3DS1Q14943 382 aa5.55□□□□□ -1.52
SHROOM3-206ENST00000484236 ANXA2RQ3ZCQ2 193 aa5.55□□□□□ -1.52
SHROOM3-206ENST00000484236 C12orf54Q6X4T0 127 aa5.55□□□□□ -1.52
SHROOM3-206ENST00000484236 POM121L12Q8N7R1 296 aa5.55□□□□□ -1.52
SHROOM3-206ENST00000484236 TIMM8BQ9Y5J9 83 aaPredicted RBP5.55□□□□□ -1.52
SHROOM3-206ENST00000484236 TRAV2A0A0B4J234 112 aa5.54□□□□□ -1.52
SHROOM3-206ENST00000484236 DLEU1O43261 78 aa5.54□□□□□ -1.52
SHROOM3-206ENST00000484236 KRTAP10-9P60411 292 aa5.54□□□□□ -1.52
SHROOM3-206ENST00000484236 RPL32P62910 135 aaKnown RBP5.54□□□□□ -1.52
SHROOM3-206ENST00000484236 ORMDL2Q53FV1 153 aa5.54□□□□□ -1.52
SHROOM3-206ENST00000484236 FAM159AQ6UWV7 190 aa5.54□□□□□ -1.52
SHROOM3-206ENST00000484236 WFDC12Q8WWY7 111 aa5.54□□□□□ -1.52
SHROOM3-206ENST00000484236 Q96MF0 132 aa5.54□□□□□ -1.52
SHROOM3-206ENST00000484236 AP1S3Q96PC3 154 aa5.54□□□□□ -1.52
SHROOM3-206ENST00000484236 UBR5O95071 2799 aaPredicted RBP5.54□□□□□ -1.52
SHROOM3-206ENST00000484236 ZNF462Q96JM2 2506 aa5.53□□□□□ -1.52
SHROOM3-206ENST00000484236 IGHV4OR15-8A0A075B7B6 117 aa5.53□□□□□ -1.52
SHROOM3-206ENST00000484236 A0A087WW49 117 aa5.53□□□□□ -1.52
SHROOM3-206ENST00000484236 A0A0J9YX75 114 aa5.53□□□□□ -1.52
SHROOM3-206ENST00000484236 C7orf71A4D174 169 aa5.53□□□□□ -1.52
SHROOM3-206ENST00000484236 LINC01549A6NIU2 74 aa5.53□□□□□ -1.52
SHROOM3-206ENST00000484236 F6UB75 175 aa5.53□□□□□ -1.52
SHROOM3-206ENST00000484236 H0Y8G0 127 aa5.53□□□□□ -1.52
SHROOM3-206ENST00000484236 SIVA1O15304 175 aa5.53□□□□□ -1.52
SHROOM3-206ENST00000484236 RNASE3P12724 160 aaKnown RBP5.53□□□□□ -1.52
SHROOM3-206ENST00000484236 G0S2P27469 103 aa5.53□□□□□ -1.52
SHROOM3-206ENST00000484236 HOXD3P31249 432 aaPredicted RBP5.53□□□□□ -1.52
SHROOM3-206ENST00000484236 BATFQ16520 125 aa5.53□□□□□ -1.52
SHROOM3-206ENST00000484236 MAPK1IP1LQ8NDC0 245 aa5.53□□□□□ -1.52
SHROOM3-206ENST00000484236 SMIM2Q9BVW6 85 aa5.53□□□□□ -1.52
SHROOM3-206ENST00000484236 ZMAT4Q9H898 229 aa5.53□□□□□ -1.52
SHROOM3-206ENST00000484236 FAM208BQ5VWN6 2430 aa5.53□□□□□ -1.52
SHROOM3-206ENST00000484236 IGKV3-7A0A075B6H7 116 aa5.52□□□□□ -1.53
SHROOM3-206ENST00000484236 J3KRW8 73 aa5.52□□□□□ -1.53
SHROOM3-206ENST00000484236 CD5LO43866 347 aa5.52□□□□□ -1.53
SHROOM3-206ENST00000484236 GAS8-AS1O95177 125 aa5.52□□□□□ -1.53
SHROOM3-206ENST00000484236 SMIM17P0DL12 118 aa5.52□□□□□ -1.53
SHROOM3-206ENST00000484236 GATA1P15976 413 aaPredicted RBP5.52□□□□□ -1.53
SHROOM3-206ENST00000484236 CDKN1BP46527 198 aa5.52□□□□□ -1.53
SHROOM3-206ENST00000484236 SYNJ2BPP57105 145 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms