RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 TREM1Q9NP99 234 aa7.06□□□□□ -1.28
CPSF4-213ENST00000484112 RPH3ALQ9UNE2 315 aa7.06□□□□□ -1.28
CPSF4-213ENST00000484112 TRGV11A0A075B6L2 103 aa7.05□□□□□ -1.28
CPSF4-213ENST00000484112 ATP5G1P05496 136 aa7.05□□□□□ -1.28
CPSF4-213ENST00000484112 ATP5G3P48201 142 aa7.05□□□□□ -1.28
CPSF4-213ENST00000484112 FGF8P55075 233 aaPredicted RBP7.05□□□□□ -1.28
CPSF4-213ENST00000484112 TCL1AP56279 114 aa7.05□□□□□ -1.28
CPSF4-213ENST00000484112 GNG5P63218 68 aa7.05□□□□□ -1.28
CPSF4-213ENST00000484112 FLI1Q01543 452 aaPredicted RBP7.05□□□□□ -1.28
CPSF4-213ENST00000484112 PRR9Q5T870 116 aa7.05□□□□□ -1.28
CPSF4-213ENST00000484112 C1orf134Q5TEV5 83 aa7.05□□□□□ -1.28
CPSF4-213ENST00000484112 FAM159AQ6UWV7 190 aa7.05□□□□□ -1.28
CPSF4-213ENST00000484112 ALKAL2Q6UX46 152 aa7.05□□□□□ -1.28
CPSF4-213ENST00000484112 Q6ZR54 194 aa7.05□□□□□ -1.28
CPSF4-213ENST00000484112 C11orf72Q8NBR9 251 aa7.05□□□□□ -1.28
CPSF4-213ENST00000484112 KCNS1Q96KK3 526 aa7.05□□□□□ -1.28
CPSF4-213ENST00000484112 TXNDC17Q9BRA2 123 aa7.05□□□□□ -1.28
CPSF4-213ENST00000484112 NOP10Q9NPE3 64 aaKnown RBP7.05□□□□□ -1.28
CPSF4-213ENST00000484112 PSG8Q9UQ74 426 aa7.05□□□□□ -1.28
CPSF4-213ENST00000484112 TRBV6-1A0A0K0K1D8 114 aa7.04□□□□□ -1.28
CPSF4-213ENST00000484112 PEX7O00628 323 aa7.04□□□□□ -1.28
CPSF4-213ENST00000484112 IGLV2-11P01706 119 aa7.04□□□□□ -1.28
CPSF4-213ENST00000484112 PRM2P04554 102 aa7.04□□□□□ -1.28
CPSF4-213ENST00000484112 S100A9P06702 114 aaKnown RBP7.04□□□□□ -1.28
CPSF4-213ENST00000484112 SULT1A2P50226 295 aa7.04□□□□□ -1.28
CPSF4-213ENST00000484112 ZNF415Q09FC8 603 aa7.04□□□□□ -1.28
CPSF4-213ENST00000484112 SMUG1Q53HV7 270 aa7.04□□□□□ -1.28
CPSF4-213ENST00000484112 COX8CQ7Z4L0 72 aa7.04□□□□□ -1.28
CPSF4-213ENST00000484112 C15orf53Q8NAA6 179 aa7.04□□□□□ -1.28
CPSF4-213ENST00000484112 FMC1Q96HJ9 113 aa7.04□□□□□ -1.28
CPSF4-213ENST00000484112 SPXQ9BT56 116 aa7.04□□□□□ -1.28
CPSF4-213ENST00000484112 TMPRSS5Q9H3S3 457 aa7.04□□□□□ -1.28
CPSF4-213ENST00000484112 ZFP30Q9Y2G7 519 aa7.04□□□□□ -1.28
CPSF4-213ENST00000484112 KLF12Q9Y4X4 402 aa7.04□□□□□ -1.28
CPSF4-213ENST00000484112 TRAV8-1A0A0A6YYK1 113 aa7.03□□□□□ -1.28
CPSF4-213ENST00000484112 C16orf90A8MZG2 172 aa7.03□□□□□ -1.28
CPSF4-213ENST00000484112 SPINK4O60575 86 aa7.03□□□□□ -1.28
CPSF4-213ENST00000484112 PFN1P07737 140 aaKnown RBP7.03□□□□□ -1.28
CPSF4-213ENST00000484112 DEFB130BP0DP73 79 aa7.03□□□□□ -1.28
CPSF4-213ENST00000484112 DEFB130AP0DP74 79 aa7.03□□□□□ -1.28
CPSF4-213ENST00000484112 UBE2G2P60604 165 aa7.03□□□□□ -1.28
CPSF4-213ENST00000484112 MAPKAPK5-AS1Q8N8E1 139 aa7.03□□□□□ -1.28
CPSF4-213ENST00000484112 TVP23CQ96ET8 276 aa7.03□□□□□ -1.28
CPSF4-213ENST00000484112 MANBALQ9NQG1 85 aa7.03□□□□□ -1.28
CPSF4-213ENST00000484112 PKHD1P08F94 4074 aa7.02□□□□□ -1.29
CPSF4-213ENST00000484112 H3BNG1 76 aa7.02□□□□□ -1.29
CPSF4-213ENST00000484112 TAGLN2P37802 199 aaKnown RBP7.02□□□□□ -1.29
CPSF4-213ENST00000484112 UBE2G1P62253 170 aa7.02□□□□□ -1.29
CPSF4-213ENST00000484112 CST9LP1Q5W188 147 aa7.02□□□□□ -1.29
CPSF4-213ENST00000484112 PRNTQ86SH4 94 aa7.02□□□□□ -1.29
CPSF4-213ENST00000484112 SDF2L1Q9HCN8 221 aa7.02□□□□□ -1.29
CPSF4-213ENST00000484112 GSN-AS1Q9NRJ2 163 aa7.02□□□□□ -1.29
CPSF4-213ENST00000484112 PAGE4O60829 102 aa7.01□□□□□ -1.29
CPSF4-213ENST00000484112 GCGP01275 180 aa7.01□□□□□ -1.29
CPSF4-213ENST00000484112 IFNA1P01562 189 aa7.01□□□□□ -1.29
CPSF4-213ENST00000484112 TNP2Q05952 138 aa7.01□□□□□ -1.29
CPSF4-213ENST00000484112 TMEM183BQ1AE95 376 aa7.01□□□□□ -1.29
CPSF4-213ENST00000484112 RNF212Q495C1 297 aa7.01□□□□□ -1.29
CPSF4-213ENST00000484112 Q86TA4 180 aa7.01□□□□□ -1.29
CPSF4-213ENST00000484112 COMMD7Q86VX2 200 aa7.01□□□□□ -1.29
CPSF4-213ENST00000484112 TRGV2A0A075B6R0 118 aa7□□□□□ -1.29
CPSF4-213ENST00000484112 GAGE12BA1L429 117 aa7□□□□□ -1.29
CPSF4-213ENST00000484112 FABP5P3A8MUU1 101 aa7□□□□□ -1.29
CPSF4-213ENST00000484112 GAGE7O76087 117 aa7□□□□□ -1.29
CPSF4-213ENST00000484112 LTAP01374 205 aa7□□□□□ -1.29
CPSF4-213ENST00000484112 GAGE12FP0CL80 117 aa7□□□□□ -1.29
CPSF4-213ENST00000484112 GAGE12GP0CL81 117 aa7□□□□□ -1.29
CPSF4-213ENST00000484112 GAGE12IP0CL82 117 aa7□□□□□ -1.29
CPSF4-213ENST00000484112 FAM3BP58499 235 aaPredicted RBP7□□□□□ -1.29
CPSF4-213ENST00000484112 SLAQ13239 276 aa7□□□□□ -1.29
CPSF4-213ENST00000484112 MUC21Q5SSG8 566 aa7□□□□□ -1.29
CPSF4-213ENST00000484112 TMEM88Q6PEY1 159 aa7□□□□□ -1.29
CPSF4-213ENST00000484112 RASL10AQ92737 203 aa7□□□□□ -1.29
CPSF4-213ENST00000484112 PTH2Q96A98 100 aa7□□□□□ -1.29
CPSF4-213ENST00000484112 SGK494Q96LW2 274 aa7□□□□□ -1.29
CPSF4-213ENST00000484112 PKD1P98161 4303 aa7□□□□□ -1.29
CPSF4-213ENST00000484112 TRGV1A0A0A0MS02 117 aa6.99□□□□□ -1.29
CPSF4-213ENST00000484112 IGHV3-16A0A0C4DH30 117 aa6.99□□□□□ -1.29
CPSF4-213ENST00000484112 RAB19A4D1S5 217 aa6.99□□□□□ -1.29
CPSF4-213ENST00000484112 F5H768 121 aa6.99□□□□□ -1.29
CPSF4-213ENST00000484112 CIDEAO60543 219 aa6.99□□□□□ -1.29
CPSF4-213ENST00000484112 CDK2AP2O75956 126 aa6.99□□□□□ -1.29
CPSF4-213ENST00000484112 TYMSP04818 313 aa6.99□□□□□ -1.29
CPSF4-213ENST00000484112 AKR1C3P42330 323 aa6.99□□□□□ -1.29
CPSF4-213ENST00000484112 BLOC1S1P78537 153 aa6.99□□□□□ -1.29
CPSF4-213ENST00000484112 PIK3CD-AS1Q5SR53 167 aa6.99□□□□□ -1.29
CPSF4-213ENST00000484112 Q6ZQT7 251 aa6.99□□□□□ -1.29
CPSF4-213ENST00000484112 Q6ZTI0 123 aa6.99□□□□□ -1.29
CPSF4-213ENST00000484112 TMEM183AQ8IXX5 376 aa6.99□□□□□ -1.29
CPSF4-213ENST00000484112 LINC00479Q96M42 142 aa6.99□□□□□ -1.29
CPSF4-213ENST00000484112 C8orf49Q96NF6 230 aa6.99□□□□□ -1.29
CPSF4-213ENST00000484112 NAGKQ9UJ70 344 aa6.99□□□□□ -1.29
CPSF4-213ENST00000484112 TRAV34A0A0B4J273 112 aa6.98□□□□□ -1.29
CPSF4-213ENST00000484112 M0R2P5 195 aa6.98□□□□□ -1.29
CPSF4-213ENST00000484112 PDE6DO43924 150 aa6.98□□□□□ -1.29
CPSF4-213ENST00000484112 ZNF80P51504 273 aaPredicted RBP6.98□□□□□ -1.29
CPSF4-213ENST00000484112 FAM162BQ5T6X4 162 aa6.98□□□□□ -1.29
CPSF4-213ENST00000484112 UQCC3Q6UW78 93 aa6.98□□□□□ -1.29
CPSF4-213ENST00000484112 LYPD6BQ8NI32 183 aa6.98□□□□□ -1.29
CPSF4-213ENST00000484112 PCNPQ8WW12 178 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms