RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 IGKV2D-40P01614 121 aaPredicted RBP8.81□□□□□ -1
PTPRF-213ENST00000481019 IGLV2-11P01706 119 aa8.81□□□□□ -1
PTPRF-213ENST00000481019 S100PP25815 95 aa8.81□□□□□ -1
PTPRF-213ENST00000481019 NANOS2P60321 138 aaKnown RBP8.81□□□□□ -1
PTPRF-213ENST00000481019 KIR3DS1Q14943 382 aa8.81□□□□□ -1
PTPRF-213ENST00000481019 SPINK13Q1W4C9 94 aa8.81□□□□□ -1
PTPRF-213ENST00000481019 IBA57Q5T440 356 aaKnown RBP8.81□□□□□ -1
PTPRF-213ENST00000481019 ZNF705AQ6ZN79 300 aaPredicted RBP8.81□□□□□ -1
PTPRF-213ENST00000481019 IMMP2LQ96T52 175 aa8.81□□□□□ -1
PTPRF-213ENST00000481019 AGPAT4-IT1Q9H0P7 198 aa8.81□□□□□ -1
PTPRF-213ENST00000481019 ZNF492Q9P255 531 aa8.81□□□□□ -1
PTPRF-213ENST00000481019 CELA1Q9UNI1 258 aa8.81□□□□□ -1
PTPRF-213ENST00000481019 TRAV12-2A0A075B6T6 113 aa8.8□□□□□ -1
PTPRF-213ENST00000481019 IGHV3OR16-12A0A075B7B8 117 aa8.8□□□□□ -1
PTPRF-213ENST00000481019 FABP5P3A8MUU1 101 aa8.8□□□□□ -1
PTPRF-213ENST00000481019 NUTF2P61970 127 aaKnown RBP8.8□□□□□ -1
PTPRF-213ENST00000481019 KCNIP4Q6PIL6 250 aa8.8□□□□□ -1
PTPRF-213ENST00000481019 SGK494Q96LW2 274 aa8.8□□□□□ -1
PTPRF-213ENST00000481019 VGLL1Q99990 258 aa8.8□□□□□ -1
PTPRF-213ENST00000481019 GATCO43716 136 aaKnown RBP8.79□□□□□ -1
PTPRF-213ENST00000481019 IGLV2-8P01709 118 aa8.79□□□□□ -1
PTPRF-213ENST00000481019 P01737 135 aa8.79□□□□□ -1
PTPRF-213ENST00000481019 LEPP41159 167 aa8.79□□□□□ -1
PTPRF-213ENST00000481019 ERCC8Q13216 396 aa8.79□□□□□ -1
PTPRF-213ENST00000481019 RNF212Q495C1 297 aa8.79□□□□□ -1
PTPRF-213ENST00000481019 CT83Q5H943 113 aa8.79□□□□□ -1
PTPRF-213ENST00000481019 FAM162BQ5T6X4 162 aa8.79□□□□□ -1
PTPRF-213ENST00000481019 C1QTNF4Q9BXJ3 329 aa8.79□□□□□ -1
PTPRF-213ENST00000481019 DNAH6Q9C0G6 4158 aa8.79□□□□□ -1
PTPRF-213ENST00000481019 ZNF705GA8MUZ8 300 aaPredicted RBP8.78□□□□□ -1
PTPRF-213ENST00000481019 A8MWL6 223 aa8.78□□□□□ -1
PTPRF-213ENST00000481019 AMBPP02760 352 aa8.78□□□□□ -1
PTPRF-213ENST00000481019 MIFP14174 115 aa8.78□□□□□ -1
PTPRF-213ENST00000481019 RPS20P60866 119 aaKnown RBP8.78□□□□□ -1
PTPRF-213ENST00000481019 PRR27Q6MZM9 219 aa8.78□□□□□ -1
PTPRF-213ENST00000481019 TRAV9-1A0A075B6T8 112 aa8.77□□□□□ -1.01
PTPRF-213ENST00000481019 TRAV21A0A0B4J279 112 aa8.77□□□□□ -1.01
PTPRF-213ENST00000481019 FAM231BA6NCW3 169 aa8.77□□□□□ -1.01
PTPRF-213ENST00000481019 PGPEP1LA6NFU8 196 aa8.77□□□□□ -1.01
PTPRF-213ENST00000481019 K7EN84 100 aa8.77□□□□□ -1.01
PTPRF-213ENST00000481019 GPX1P07203 203 aa8.77□□□□□ -1.01
PTPRF-213ENST00000481019 CRISP2P16562 243 aa8.77□□□□□ -1.01
PTPRF-213ENST00000481019 NHLRC2Q8NBF2 726 aa8.77□□□□□ -1.01
PTPRF-213ENST00000481019 C11orf45Q8TAV5 145 aa8.77□□□□□ -1.01
PTPRF-213ENST00000481019 NEU1Q99519 415 aa8.77□□□□□ -1.01
PTPRF-213ENST00000481019 DNAH10Q8IVF4 4471 aa8.77□□□□□ -1.01
PTPRF-213ENST00000481019 KMT2AQ03164 3969 aa8.77□□□□□ -1.01
PTPRF-213ENST00000481019 PFN1P07737 140 aaKnown RBP8.76□□□□□ -1.01
PTPRF-213ENST00000481019 AZU1P20160 251 aa8.76□□□□□ -1.01
PTPRF-213ENST00000481019 EMP1P54849 157 aa8.76□□□□□ -1.01
PTPRF-213ENST00000481019 OR5I1Q13606 314 aa8.76□□□□□ -1.01
PTPRF-213ENST00000481019 CEMP1Q6PRD7 247 aaPredicted RBP8.76□□□□□ -1.01
PTPRF-213ENST00000481019 ATRAIDQ6UW56 229 aa8.76□□□□□ -1.01
PTPRF-213ENST00000481019 NUDT10Q8NFP7 164 aa8.76□□□□□ -1.01
PTPRF-213ENST00000481019 NUDT11Q96G61 164 aa8.76□□□□□ -1.01
PTPRF-213ENST00000481019 C19orf71A6NCJ1 209 aa8.75□□□□□ -1.01
PTPRF-213ENST00000481019 J3KRW8 73 aa8.75□□□□□ -1.01
PTPRF-213ENST00000481019 INSP01308 110 aa8.75□□□□□ -1.01
PTPRF-213ENST00000481019 CDKN1BP46527 198 aa8.75□□□□□ -1.01
PTPRF-213ENST00000481019 BTN1A1Q13410 526 aa8.75□□□□□ -1.01
PTPRF-213ENST00000481019 C12orf74Q32Q52 190 aa8.75□□□□□ -1.01
PTPRF-213ENST00000481019 Q6AWC8 147 aa8.75□□□□□ -1.01
PTPRF-213ENST00000481019 Q8TAT8 98 aa8.75□□□□□ -1.01
PTPRF-213ENST00000481019 PHLDA1Q8WV24 401 aaPredicted RBP8.75□□□□□ -1.01
PTPRF-213ENST00000481019 ZC2HC1AQ96GY0 325 aa8.75□□□□□ -1.01
PTPRF-213ENST00000481019 FAM19A4Q96LR4 140 aa8.75□□□□□ -1.01
PTPRF-213ENST00000481019 GFRA4Q9GZZ7 299 aa8.75□□□□□ -1.01
PTPRF-213ENST00000481019 RPP21Q9H633 154 aaKnown RBP8.75□□□□□ -1.01
PTPRF-213ENST00000481019 IL36BQ9NZH7 164 aa8.75□□□□□ -1.01
PTPRF-213ENST00000481019 GOLT1BQ9Y3E0 138 aa8.75□□□□□ -1.01
PTPRF-213ENST00000481019 TMEM189A5PLL7 270 aa8.74□□□□□ -1.01
PTPRF-213ENST00000481019 COX19Q49B96 90 aa8.74□□□□□ -1.01
PTPRF-213ENST00000481019 GFI1BQ5VTD9 330 aa8.74□□□□□ -1.01
PTPRF-213ENST00000481019 Q6ZQT7 251 aa8.74□□□□□ -1.01
PTPRF-213ENST00000481019 Q6ZTC4 211 aa8.74□□□□□ -1.01
PTPRF-213ENST00000481019 TSKUQ8WUA8 353 aa8.74□□□□□ -1.01
PTPRF-213ENST00000481019 KCNS1Q96KK3 526 aa8.74□□□□□ -1.01
PTPRF-213ENST00000481019 C8orf49Q96NF6 230 aa8.74□□□□□ -1.01
PTPRF-213ENST00000481019 C20orf144Q9BQM9 153 aa8.74□□□□□ -1.01
PTPRF-213ENST00000481019 RNASE7Q9H1E1 156 aaKnown RBP8.74□□□□□ -1.01
PTPRF-213ENST00000481019 V9GYV3 84 aa8.74□□□□□ -1.01
PTPRF-213ENST00000481019 LCE6AA0A183 80 aa8.73□□□□□ -1.01
PTPRF-213ENST00000481019 A0A1W2PPQ1 181 aa8.73□□□□□ -1.01
PTPRF-213ENST00000481019 PLAC8L1A1L4L8 177 aa8.73□□□□□ -1.01
PTPRF-213ENST00000481019 SMIM9A6NGZ8 99 aa8.73□□□□□ -1.01
PTPRF-213ENST00000481019 KLLNB2CW77 178 aa8.73□□□□□ -1.01
PTPRF-213ENST00000481019 ORM1P02763 201 aa8.73□□□□□ -1.01
PTPRF-213ENST00000481019 PRR9Q5T870 116 aa8.73□□□□□ -1.01
PTPRF-213ENST00000481019 OR2D3Q8NGH3 330 aa8.73□□□□□ -1.01
PTPRF-213ENST00000481019 NAT8BQ9UHF3 227 aa8.73□□□□□ -1.01
PTPRF-213ENST00000481019 DNAH2Q9P225 4427 aa8.72□□□□□ -1.01
PTPRF-213ENST00000481019 SH2D1AO60880 128 aa8.72□□□□□ -1.01
PTPRF-213ENST00000481019 CXCL1P09341 107 aa8.72□□□□□ -1.01
PTPRF-213ENST00000481019 RNASE4P34096 147 aaKnown RBP8.72□□□□□ -1.01
PTPRF-213ENST00000481019 FAM222AQ5U5X8 452 aa8.72□□□□□ -1.01
PTPRF-213ENST00000481019 TMEM88Q6PEY1 159 aa8.72□□□□□ -1.01
PTPRF-213ENST00000481019 ZFAND2AQ8N6M9 145 aa8.72□□□□□ -1.01
PTPRF-213ENST00000481019 BORCS7Q96B45 105 aa8.72□□□□□ -1.01
PTPRF-213ENST00000481019 TMEM208Q9BTX3 173 aa8.72□□□□□ -1.01
PTPRF-213ENST00000481019 DKK2Q9UBU2 259 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms