RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 IGHV4-28A0A0C4DH34 117 aa8.07□□□□□ -1.12
CLDN11-205ENST00000480067 DEFB4AO15263 64 aa8.07□□□□□ -1.12
CLDN11-205ENST00000480067 AZU1P20160 251 aa8.07□□□□□ -1.12
CLDN11-205ENST00000480067 TDRG1Q3Y452 100 aa8.07□□□□□ -1.12
CLDN11-205ENST00000480067 ANXA2RQ3ZCQ2 193 aa8.07□□□□□ -1.12
CLDN11-205ENST00000480067 ZNF493Q6ZR52 646 aa8.07□□□□□ -1.12
CLDN11-205ENST00000480067 Q8NAQ8 132 aa8.07□□□□□ -1.12
CLDN11-205ENST00000480067 TMEM189A5PLL7 270 aa8.06□□□□□ -1.12
CLDN11-205ENST00000480067 M0R036 132 aa8.06□□□□□ -1.12
CLDN11-205ENST00000480067 OR5I1Q13606 314 aa8.06□□□□□ -1.12
CLDN11-205ENST00000480067 TMEM263Q8WUH6 116 aaKnown RBP8.06□□□□□ -1.12
CLDN11-205ENST00000480067 C16orf74Q96GX8 76 aa8.06□□□□□ -1.12
CLDN11-205ENST00000480067 SDF2L1Q9HCN8 221 aa8.06□□□□□ -1.12
CLDN11-205ENST00000480067 C11orf21Q9P2W6 132 aa8.06□□□□□ -1.12
CLDN11-205ENST00000480067 TP53TG3Q9ULZ0 132 aa8.06□□□□□ -1.12
CLDN11-205ENST00000480067 LY96Q9Y6Y9 160 aa8.06□□□□□ -1.12
CLDN11-205ENST00000480067 TRGV11A0A075B6L2 103 aa8.05□□□□□ -1.12
CLDN11-205ENST00000480067 A0A0J9YWU9 116 aa8.05□□□□□ -1.12
CLDN11-205ENST00000480067 B4DEV8 164 aa8.05□□□□□ -1.12
CLDN11-205ENST00000480067 K7EN84 100 aa8.05□□□□□ -1.12
CLDN11-205ENST00000480067 GNRH2O43555 120 aa8.05□□□□□ -1.12
CLDN11-205ENST00000480067 LINC01551Q86U37 167 aa8.05□□□□□ -1.12
CLDN11-205ENST00000480067 RNASE8Q8TDE3 154 aaKnown RBP8.05□□□□□ -1.12
CLDN11-205ENST00000480067 NAT8Q9UHE5 227 aa8.05□□□□□ -1.12
CLDN11-205ENST00000480067 IGKV3D-20A0A0C4DH25 116 aa8.05□□□□□ -1.12
CLDN11-205ENST00000480067 TMEM218A2RU14 115 aa8.05□□□□□ -1.12
CLDN11-205ENST00000480067 SNURFLB1AK76 121 aa8.05□□□□□ -1.12
CLDN11-205ENST00000480067 P01737 135 aa8.05□□□□□ -1.12
CLDN11-205ENST00000480067 C11orf68Q9H3H3 251 aaKnown RBP8.05□□□□□ -1.12
CLDN11-205ENST00000480067 GSN-AS1Q9NRJ2 163 aa8.05□□□□□ -1.12
CLDN11-205ENST00000480067 TIMM8BQ9Y5J9 83 aaPredicted RBP8.05□□□□□ -1.12
CLDN11-205ENST00000480067 TMSB15BA0A087X1C1 80 aa8.04□□□□□ -1.12
CLDN11-205ENST00000480067 KRBOX1C9JBD0 128 aa8.04□□□□□ -1.12
CLDN11-205ENST00000480067 TYMSP04818 313 aa8.04□□□□□ -1.12
CLDN11-205ENST00000480067 S100A4P26447 101 aaKnown RBP8.04□□□□□ -1.12
CLDN11-205ENST00000480067 ERVFC1-1P60608 527 aa8.04□□□□□ -1.12
CLDN11-205ENST00000480067 ZNF415Q09FC8 603 aa8.04□□□□□ -1.12
CLDN11-205ENST00000480067 LINC01559Q495D7 138 aa8.04□□□□□ -1.12
CLDN11-205ENST00000480067 IBA57Q5T440 356 aaKnown RBP8.04□□□□□ -1.12
CLDN11-205ENST00000480067 MDFICQ9P1T7 246 aa8.04□□□□□ -1.12
CLDN11-205ENST00000480067 C19orf71A6NCJ1 209 aa8.03□□□□□ -1.12
CLDN11-205ENST00000480067 F8W036 122 aa8.03□□□□□ -1.12
CLDN11-205ENST00000480067 SPART-AS1P0CW21 52 aa8.03□□□□□ -1.12
CLDN11-205ENST00000480067 RPL23P62829 140 aaKnown RBP8.03□□□□□ -1.12
CLDN11-205ENST00000480067 ADIRFQ15847 76 aa8.03□□□□□ -1.12
CLDN11-205ENST00000480067 NUDT10Q8NFP7 164 aa8.03□□□□□ -1.12
CLDN11-205ENST00000480067 NUDT11Q96G61 164 aa8.03□□□□□ -1.12
CLDN11-205ENST00000480067 RNASE7Q9H1E1 156 aaKnown RBP8.03□□□□□ -1.12
CLDN11-205ENST00000480067 NOP10Q9NPE3 64 aaKnown RBP8.03□□□□□ -1.12
CLDN11-205ENST00000480067 IGHV3-16A0A0C4DH30 117 aa8.02□□□□□ -1.13
CLDN11-205ENST00000480067 PLAC8L1A1L4L8 177 aa8.02□□□□□ -1.13
CLDN11-205ENST00000480067 XKRY2A2RUG3 117 aa8.02□□□□□ -1.13
CLDN11-205ENST00000480067 GRIFINA4D1Z8 144 aa8.02□□□□□ -1.13
CLDN11-205ENST00000480067 CXorf65A6NEN9 183 aa8.02□□□□□ -1.13
CLDN11-205ENST00000480067 ASIPP42127 132 aa8.02□□□□□ -1.13
CLDN11-205ENST00000480067 RPL19P84098 196 aaKnown RBP8.02□□□□□ -1.13
CLDN11-205ENST00000480067 DAZ2Q13117 558 aaKnown RBP8.02□□□□□ -1.13
CLDN11-205ENST00000480067 C11orf72Q8NBR9 251 aa8.02□□□□□ -1.13
CLDN11-205ENST00000480067 OR2D3Q8NGH3 330 aa8.02□□□□□ -1.13
CLDN11-205ENST00000480067 TEX48A0A1B0GUV7 120 aa8.01□□□□□ -1.13
CLDN11-205ENST00000480067 TCL1AP56279 114 aa8.01□□□□□ -1.13
CLDN11-205ENST00000480067 RPS20P60866 119 aaKnown RBP8.01□□□□□ -1.13
CLDN11-205ENST00000480067 FAM222AQ5U5X8 452 aa8.01□□□□□ -1.13
CLDN11-205ENST00000480067 FAM231DQ6ZW35 169 aa8.01□□□□□ -1.13
CLDN11-205ENST00000480067 C15orf54Q8N8G6 183 aa8.01□□□□□ -1.13
CLDN11-205ENST00000480067 C11orf45Q8TAV5 145 aa8.01□□□□□ -1.13
CLDN11-205ENST00000480067 ISOC2Q96AB3 205 aa8.01□□□□□ -1.13
CLDN11-205ENST00000480067 SPXQ9BT56 116 aa8.01□□□□□ -1.13
CLDN11-205ENST00000480067 DKK2Q9UBU2 259 aa8.01□□□□□ -1.13
CLDN11-205ENST00000480067 LYRM9A8MSI8 78 aa8.01□□□□□ -1.13
CLDN11-205ENST00000480067 GATCO43716 136 aaKnown RBP8.01□□□□□ -1.13
CLDN11-205ENST00000480067 PNRC1Q12796 327 aaPredicted RBP8.01□□□□□ -1.13
CLDN11-205ENST00000480067 ZNF575Q86XF7 245 aa8.01□□□□□ -1.13
CLDN11-205ENST00000480067 SFRP2Q96HF1 295 aa8.01□□□□□ -1.13
CLDN11-205ENST00000480067 SEC11CQ9BY50 192 aa8.01□□□□□ -1.13
CLDN11-205ENST00000480067 RPP21Q9H633 154 aaKnown RBP8.01□□□□□ -1.13
CLDN11-205ENST00000480067 EDA2RQ9HAV5 297 aa8.01□□□□□ -1.13
CLDN11-205ENST00000480067 TRGV1A0A0A0MS02 117 aa8□□□□□ -1.13
CLDN11-205ENST00000480067 ARMS2P0C7Q2 107 aa8□□□□□ -1.13
CLDN11-205ENST00000480067 DEFB130BP0DP73 79 aa8□□□□□ -1.13
CLDN11-205ENST00000480067 DEFB130AP0DP74 79 aa8□□□□□ -1.13
CLDN11-205ENST00000480067 NDUFA5Q16718 116 aa8□□□□□ -1.13
CLDN11-205ENST00000480067 DNLZQ5SXM8 178 aa8□□□□□ -1.13
CLDN11-205ENST00000480067 SLC7A5P1Q8MH63 180 aa8□□□□□ -1.13
CLDN11-205ENST00000480067 OSTCQ9NRP0 149 aa8□□□□□ -1.13
CLDN11-205ENST00000480067 IL36BQ9NZH7 164 aa8□□□□□ -1.13
CLDN11-205ENST00000480067 H3BVH4 76 aa7.99□□□□□ -1.13
CLDN11-205ENST00000480067 M0R2P5 195 aa7.99□□□□□ -1.13
CLDN11-205ENST00000480067 CXCL1P09341 107 aa7.99□□□□□ -1.13
CLDN11-205ENST00000480067 GZMBP10144 247 aa7.99□□□□□ -1.13
CLDN11-205ENST00000480067 RNASE3P12724 160 aaKnown RBP7.99□□□□□ -1.13
CLDN11-205ENST00000480067 ADCYAP1P18509 176 aa7.99□□□□□ -1.13
CLDN11-205ENST00000480067 LGALS9BQ3B8N2 356 aa7.99□□□□□ -1.13
CLDN11-205ENST00000480067 OR10G8Q8NGN5 311 aa7.99□□□□□ -1.13
CLDN11-205ENST00000480067 IL17DQ8TAD2 202 aa7.99□□□□□ -1.13
CLDN11-205ENST00000480067 TPPP3Q9BW30 176 aa7.99□□□□□ -1.13
CLDN11-205ENST00000480067 CELA1Q9UNI1 258 aa7.99□□□□□ -1.13
CLDN11-205ENST00000480067 PHLDA3Q9Y5J5 127 aa7.99□□□□□ -1.13
CLDN11-205ENST00000480067 GAGE12BA1L429 117 aa7.98□□□□□ -1.13
CLDN11-205ENST00000480067 A8MWL6 223 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms