RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 CRYBB3P26998 211 aa4.7□□□□□ -1.66
SF3B1-209ENST00000479532 PSG9Q00887 426 aa4.7□□□□□ -1.66
SF3B1-209ENST00000479532 KLF5Q13887 457 aaPredicted RBP4.7□□□□□ -1.66
SF3B1-209ENST00000479532 OR9G4Q8NGQ1 327 aa4.7□□□□□ -1.66
SF3B1-209ENST00000479532 OR1B1Q8NGR6 318 aa4.7□□□□□ -1.66
SF3B1-209ENST00000479532 DYNLRB2Q8TF09 96 aa4.7□□□□□ -1.66
SF3B1-209ENST00000479532 DLX4Q92988 240 aaPredicted RBP4.7□□□□□ -1.66
SF3B1-209ENST00000479532 BORCS7Q96B45 105 aa4.7□□□□□ -1.66
SF3B1-209ENST00000479532 TRGV9Q99603 122 aa4.7□□□□□ -1.66
SF3B1-209ENST00000479532 TMEM147Q9BVK8 224 aa4.7□□□□□ -1.66
SF3B1-209ENST00000479532 SMIM3Q9BZL3 60 aa4.7□□□□□ -1.66
SF3B1-209ENST00000479532 GNG13Q9P2W3 67 aa4.7□□□□□ -1.66
SF3B1-209ENST00000479532 RABAC1Q9UI14 185 aa4.7□□□□□ -1.66
SF3B1-209ENST00000479532 TP53TG3Q9ULZ0 132 aa4.7□□□□□ -1.66
SF3B1-209ENST00000479532 COL6A5A8TX70 2615 aa4.7□□□□□ -1.66
SF3B1-209ENST00000479532 TRAV26-1A0A087WT03 109 aa4.69□□□□□ -1.66
SF3B1-209ENST00000479532 IGHV3-35A0A0C4DH35 117 aa4.69□□□□□ -1.66
SF3B1-209ENST00000479532 CTXND1A0A1B0GTU2 59 aa4.69□□□□□ -1.66
SF3B1-209ENST00000479532 A0A1W2PS18 150 aa4.69□□□□□ -1.66
SF3B1-209ENST00000479532 IGSF23A1L1A6 192 aa4.69□□□□□ -1.66
SF3B1-209ENST00000479532 PMS2P5A8MQ11 134 aa4.69□□□□□ -1.66
SF3B1-209ENST00000479532 PRSS46E5RG02 174 aa4.69□□□□□ -1.66
SF3B1-209ENST00000479532 K7EMT4 169 aa4.69□□□□□ -1.66
SF3B1-209ENST00000479532 SIVA1O15304 175 aa4.69□□□□□ -1.66
SF3B1-209ENST00000479532 MPDU1O75352 247 aa4.69□□□□□ -1.66
SF3B1-209ENST00000479532 HLA-DQA1P01909 254 aa4.69□□□□□ -1.66
SF3B1-209ENST00000479532 AZU1P20160 251 aa4.69□□□□□ -1.66
SF3B1-209ENST00000479532 PMCHP20382 165 aa4.69□□□□□ -1.66
SF3B1-209ENST00000479532 HINT1P49773 126 aaPredicted RBP4.69□□□□□ -1.66
SF3B1-209ENST00000479532 RPL24P83731 157 aaKnown RBP4.69□□□□□ -1.66
SF3B1-209ENST00000479532 TIGITQ495A1 244 aa4.69□□□□□ -1.66
SF3B1-209ENST00000479532 CST9LP1Q5W188 147 aa4.69□□□□□ -1.66
SF3B1-209ENST00000479532 KRTAP5-11Q6L8G4 156 aa4.69□□□□□ -1.66
SF3B1-209ENST00000479532 BAGE3Q86Y29 109 aa4.69□□□□□ -1.66
SF3B1-209ENST00000479532 BAGE2Q86Y30 109 aa4.69□□□□□ -1.66
SF3B1-209ENST00000479532 THAP8Q8NA92 274 aa4.69□□□□□ -1.66
SF3B1-209ENST00000479532 WFDC9Q8NEX5 89 aa4.69□□□□□ -1.66
SF3B1-209ENST00000479532 OR5C1Q8NGR4 320 aa4.69□□□□□ -1.66
SF3B1-209ENST00000479532 SCGB1C1Q8TD33 95 aa4.69□□□□□ -1.66
SF3B1-209ENST00000479532 TMEM190Q8WZ59 177 aa4.69□□□□□ -1.66
SF3B1-209ENST00000479532 GRAMD2BQ96HH9 432 aa4.69□□□□□ -1.66
SF3B1-209ENST00000479532 METTL26Q96S19 204 aa4.69□□□□□ -1.66
SF3B1-209ENST00000479532 CHRDL1Q9BU40 450 aa4.69□□□□□ -1.66
SF3B1-209ENST00000479532 NRN1Q9NPD7 142 aa4.69□□□□□ -1.66
SF3B1-209ENST00000479532 DAZ1Q9NQZ3 744 aaKnown RBP4.69□□□□□ -1.66
SF3B1-209ENST00000479532 KCNIP2Q9NS61 270 aa4.69□□□□□ -1.66
SF3B1-209ENST00000479532 UBE2L5PA0A1B0GUS4 154 aa4.68□□□□□ -1.66
SF3B1-209ENST00000479532 TMEM213A2RRL7 107 aa4.68□□□□□ -1.66
SF3B1-209ENST00000479532 C2orf70A6NJV1 201 aa4.68□□□□□ -1.66
SF3B1-209ENST00000479532 C9JCJ5 164 aa4.68□□□□□ -1.66
SF3B1-209ENST00000479532 RHODO00212 210 aa4.68□□□□□ -1.66
SF3B1-209ENST00000479532 IL4P05112 153 aa4.68□□□□□ -1.66
SF3B1-209ENST00000479532 OR5AL1P0C617 328 aa4.68□□□□□ -1.66
SF3B1-209ENST00000479532 NPPCP23582 126 aa4.68□□□□□ -1.66
SF3B1-209ENST00000479532 TCL1AP56279 114 aa4.68□□□□□ -1.66
SF3B1-209ENST00000479532 LYZP61626 148 aa4.68□□□□□ -1.66
SF3B1-209ENST00000479532 TMEM97Q5BJF2 176 aa4.68□□□□□ -1.66
SF3B1-209ENST00000479532 FFAR4Q5NUL3 377 aa4.68□□□□□ -1.66
SF3B1-209ENST00000479532 SERTAD4-AS1Q5TG53 156 aa4.68□□□□□ -1.66
SF3B1-209ENST00000479532 AMMECR1LQ6DCA0 310 aa4.68□□□□□ -1.66
SF3B1-209ENST00000479532 SLC25A34Q6PIV7 304 aa4.68□□□□□ -1.66
SF3B1-209ENST00000479532 OR2K2Q8NGT1 345 aa4.68□□□□□ -1.66
SF3B1-209ENST00000479532 GPR82Q96P67 336 aa4.68□□□□□ -1.66
SF3B1-209ENST00000479532 AP1S3Q96PC3 154 aa4.68□□□□□ -1.66
SF3B1-209ENST00000479532 SPANXDQ9BXN6 97 aa4.68□□□□□ -1.66
SF3B1-209ENST00000479532 TECRQ9NZ01 308 aaKnown RBP4.68□□□□□ -1.66
SF3B1-209ENST00000479532 IL36BQ9NZH7 164 aa4.68□□□□□ -1.66
SF3B1-209ENST00000479532 MRPL36Q9P0J6 103 aaKnown RBP4.68□□□□□ -1.66
SF3B1-209ENST00000479532 ANK2Q01484 3957 aa4.67□□□□□ -1.66
SF3B1-209ENST00000479532 F8W1H4 67 aa4.67□□□□□ -1.66
SF3B1-209ENST00000479532 K7EQM0 130 aa4.67□□□□□ -1.66
SF3B1-209ENST00000479532 IGKV1-17P01599 117 aa4.67□□□□□ -1.66
SF3B1-209ENST00000479532 C3orf79P0CE67 100 aa4.67□□□□□ -1.66
SF3B1-209ENST00000479532 IGLL1P15814 213 aa4.67□□□□□ -1.66
SF3B1-209ENST00000479532 EDN2P20800 178 aa4.67□□□□□ -1.66
SF3B1-209ENST00000479532 CBLN1P23435 193 aa4.67□□□□□ -1.66
SF3B1-209ENST00000479532 AMTP48728 403 aa4.67□□□□□ -1.66
SF3B1-209ENST00000479532 PLP1P60201 277 aa4.67□□□□□ -1.66
SF3B1-209ENST00000479532 KRTDAPP60985 99 aa4.67□□□□□ -1.66
SF3B1-209ENST00000479532 ZNF90Q03938 601 aa4.67□□□□□ -1.66
SF3B1-209ENST00000479532 ARL16Q0P5N6 197 aa4.67□□□□□ -1.66
SF3B1-209ENST00000479532 VWC2Q2TAL6 325 aa4.67□□□□□ -1.66
SF3B1-209ENST00000479532 FAM78BQ5VT40 261 aa4.67□□□□□ -1.66
SF3B1-209ENST00000479532 LCN12Q6JVE5 192 aa4.67□□□□□ -1.66
SF3B1-209ENST00000479532 UNQ9165/PRO28630Q6UXU0 137 aa4.67□□□□□ -1.66
SF3B1-209ENST00000479532 RBPMS2Q6ZRY4 209 aaKnown RBP4.67□□□□□ -1.66
SF3B1-209ENST00000479532 ERASQ7Z444 233 aa4.67□□□□□ -1.66
SF3B1-209ENST00000479532 HAPLN4Q86UW8 402 aa4.67□□□□□ -1.66
SF3B1-209ENST00000479532 OR1L4Q8NGR5 311 aa4.67□□□□□ -1.66
SF3B1-209ENST00000479532 ATP6V0E2Q8NHE4 81 aa4.67□□□□□ -1.66
SF3B1-209ENST00000479532 C18orf32Q8TCD1 76 aa4.67□□□□□ -1.66
SF3B1-209ENST00000479532 WDR61Q9GZS3 305 aaKnown RBP4.67□□□□□ -1.66
SF3B1-209ENST00000479532 GEMIN7Q9H840 131 aaKnown RBP4.67□□□□□ -1.66
SF3B1-209ENST00000479532 RPRMQ9NS64 109 aa4.67□□□□□ -1.66
SF3B1-209ENST00000479532 WDR83OSQ9Y284 106 aa4.67□□□□□ -1.66
SF3B1-209ENST00000479532 IGKV1D-37A0A075B6S9 117 aa4.66□□□□□ -1.66
SF3B1-209ENST00000479532 IGHV3OR16-8A0A075B7F1 116 aa4.66□□□□□ -1.66
SF3B1-209ENST00000479532 IGHV7-4-1A0A0J9YVY3 117 aa4.66□□□□□ -1.66
SF3B1-209ENST00000479532 TRBV7-9A0A0J9YWB2 115 aa4.66□□□□□ -1.66
SF3B1-209ENST00000479532 WI2-2373I1.2A0A1W2PRP0 233 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms