RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 COX19Q49B96 90 aa2.77□□□□□ -1.97
CCDC171-207ENST00000478913 SPIN3Q5JUX0 258 aa2.77□□□□□ -1.97
CCDC171-207ENST00000478913 FAM201AQ5SY85 155 aa2.77□□□□□ -1.97
CCDC171-207ENST00000478913 C1orf194Q5T5A4 169 aa2.77□□□□□ -1.97
CCDC171-207ENST00000478913 FAM162BQ5T6X4 162 aa2.77□□□□□ -1.97
CCDC171-207ENST00000478913 PP632Q6XCG6 107 aa2.77□□□□□ -1.97
CCDC171-207ENST00000478913 MDP1Q86V88 176 aa2.77□□□□□ -1.97
CCDC171-207ENST00000478913 TCTEX1D1Q8N7M0 179 aa2.77□□□□□ -1.97
CCDC171-207ENST00000478913 LRRC75AQ8NAA5 344 aa2.77□□□□□ -1.97
CCDC171-207ENST00000478913 OR4B1Q8NGF8 309 aa2.77□□□□□ -1.97
CCDC171-207ENST00000478913 OR4D6Q8NGJ1 314 aa2.77□□□□□ -1.97
CCDC171-207ENST00000478913 OR13G1Q8NGZ3 307 aa2.77□□□□□ -1.97
CCDC171-207ENST00000478913 OR2T10Q8NGZ9 312 aa2.77□□□□□ -1.97
CCDC171-207ENST00000478913 ZNF502Q8TBZ5 544 aa2.77□□□□□ -1.97
CCDC171-207ENST00000478913 NEK7Q8TDX7 302 aa2.77□□□□□ -1.97
CCDC171-207ENST00000478913 Q8WTZ3 238 aa2.77□□□□□ -1.97
CCDC171-207ENST00000478913 RNF133Q8WVZ7 376 aa2.77□□□□□ -1.97
CCDC171-207ENST00000478913 CACNG8Q8WXS5 425 aa2.77□□□□□ -1.97
CCDC171-207ENST00000478913 IMMP2LQ96T52 175 aa2.77□□□□□ -1.97
CCDC171-207ENST00000478913 HIST1H2BLQ99880 126 aa2.77□□□□□ -1.97
CCDC171-207ENST00000478913 SMIM7Q9BQ49 75 aa2.77□□□□□ -1.97
CCDC171-207ENST00000478913 MIEN1Q9BRT3 115 aa2.77□□□□□ -1.97
CCDC171-207ENST00000478913 AGMATQ9BSE5 352 aa2.77□□□□□ -1.97
CCDC171-207ENST00000478913 RTBDNQ9BSG5 229 aaPredicted RBP2.77□□□□□ -1.97
CCDC171-207ENST00000478913 PECRQ9BY49 303 aa2.77□□□□□ -1.97
CCDC171-207ENST00000478913 PARD6GQ9BYG4 376 aaPredicted RBP2.77□□□□□ -1.97
CCDC171-207ENST00000478913 SAMD10Q9BYL1 202 aa2.77□□□□□ -1.97
CCDC171-207ENST00000478913 LPAR5Q9H1C0 372 aa2.77□□□□□ -1.97
CCDC171-207ENST00000478913 WFDC10AQ9H1F0 79 aa2.77□□□□□ -1.97
CCDC171-207ENST00000478913 SLC39A9Q9NUM3 307 aa2.77□□□□□ -1.97
CCDC171-207ENST00000478913 ZNF586Q9NXT0 402 aa2.77□□□□□ -1.97
CCDC171-207ENST00000478913 ANXA10Q9UJ72 324 aa2.77□□□□□ -1.97
CCDC171-207ENST00000478913 LINC00527Q9UJ94 153 aa2.77□□□□□ -1.97
CCDC171-207ENST00000478913 ANAPC10Q9UM13 185 aa2.77□□□□□ -1.97
CCDC171-207ENST00000478913 MDN1Q9NU22 5596 aa2.77□□□□□ -1.97
CCDC171-207ENST00000478913 IGKV1D-42A0A075B6H8 117 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 IGLV1-50A0A075B6I6 118 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 TRAV9-1A0A075B6T8 112 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 NBDYA0A0U1RRE5 68 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 C3orf85A0A1B0GTC6 90 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 TMEM223A0PJW6 202 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 CD300LBA8K4G0 201 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 F6UZH7 168 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 TMEM250H0YL14 139 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 SDCBPO00560 298 aaPredicted RBP2.76□□□□□ -1.97
CCDC171-207ENST00000478913 PLPP3O14495 311 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 DLEU1O43261 78 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 PDE6DO43924 150 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 SSSCA1O60232 199 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 MMP7P09237 267 aaPredicted RBP2.76□□□□□ -1.97
CCDC171-207ENST00000478913 PGA4P0DJD7 388 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 PGA5P0DJD9 388 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 GZMBP10144 247 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 COX5BP10606 129 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 ATP6V0CP27449 155 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 ARR3P36575 388 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 PPP1CCP36873 323 aaKnown RBP2.76□□□□□ -1.97
CCDC171-207ENST00000478913 UBE2E1P51965 193 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 FXYD4P59646 89 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 PPP1CBP62140 327 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 TNFAIP6P98066 277 aaPredicted RBP2.76□□□□□ -1.97
CCDC171-207ENST00000478913 PRDX4Q13162 271 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 KISS1Q15726 138 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 MSMO1Q15800 293 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 BATFQ16520 125 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 ATP6V1FQ16864 119 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 BSXQ3C1V8 233 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 TOMM20LQ6UXN7 152 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 MARCH3Q86UD3 253 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 LHFPL1Q86WI0 220 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 BAGE3Q86Y29 109 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 BAGE2Q86Y30 109 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 OR5D18Q8NGL1 313 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 OR5L1Q8NGL2 311 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 OR5C1Q8NGR4 320 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 OR10J6PQ8NGY7 276 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 CMTM2Q8TAZ6 248 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 OR51E1Q8TCB6 317 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 TMEM230Q96A57 120 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 ARHGAP5-AS1Q96IT6 56 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 TXNDC17Q9BRA2 123 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 PSMG3Q9BT73 122 aaPredicted RBP2.76□□□□□ -1.97
CCDC171-207ENST00000478913 HINT2Q9BX68 163 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 BANF2Q9H503 90 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 KCNIP2Q9NS61 270 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 FAM206AQ9NX38 181 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 BET1LQ9NYM9 111 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 ZNF391Q9UJN7 358 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 TRAPPC1Q9Y5R8 145 aa2.76□□□□□ -1.97
CCDC171-207ENST00000478913 TRBV9A0A0B4J1U6 114 aa2.75□□□□□ -1.97
CCDC171-207ENST00000478913 LOC102725191A0A1B0GVB3 256 aa2.75□□□□□ -1.97
CCDC171-207ENST00000478913 C9JQL5 133 aa2.75□□□□□ -1.97
CCDC171-207ENST00000478913 DEFB4AO15263 64 aa2.75□□□□□ -1.97
CCDC171-207ENST00000478913 SOCS1O15524 211 aa2.75□□□□□ -1.97
CCDC171-207ENST00000478913 XRCC2O43543 280 aa2.75□□□□□ -1.97
CCDC171-207ENST00000478913 ZNF737O75373 536 aa2.75□□□□□ -1.97
CCDC171-207ENST00000478913 DHRS3O75911 302 aa2.75□□□□□ -1.97
CCDC171-207ENST00000478913 NRASP01111 189 aa2.75□□□□□ -1.97
CCDC171-207ENST00000478913 KRASP01116 189 aa2.75□□□□□ -1.97
CCDC171-207ENST00000478913 IGKV1D-16P01601 117 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms