RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 Q9H521 79 aa3.04□□□□□ -1.92
CKS1B-207ENST00000477676 NDUFA13Q9P0J0 144 aa3.04□□□□□ -1.92
CKS1B-207ENST00000477676 TP53TG3Q9ULZ0 132 aa3.04□□□□□ -1.92
CKS1B-207ENST00000477676 KCNIP3Q9Y2W7 256 aa3.04□□□□□ -1.92
CKS1B-207ENST00000477676 TRAV5A0A0B4J249 113 aa3.03□□□□□ -1.92
CKS1B-207ENST00000477676 SNURFLB1AK76 121 aa3.03□□□□□ -1.92
CKS1B-207ENST00000477676 KLLNB2CW77 178 aa3.03□□□□□ -1.92
CKS1B-207ENST00000477676 K7EPK0 472 aa3.03□□□□□ -1.92
CKS1B-207ENST00000477676 M0R3E3 92 aa3.03□□□□□ -1.92
CKS1B-207ENST00000477676 SPINK4O60575 86 aa3.03□□□□□ -1.92
CKS1B-207ENST00000477676 IL5P05113 134 aa3.03□□□□□ -1.92
CKS1B-207ENST00000477676 OR5G3P0C626 314 aa3.03□□□□□ -1.92
CKS1B-207ENST00000477676 CFC1BP0CG36 223 aa3.03□□□□□ -1.92
CKS1B-207ENST00000477676 CFC1P0CG37 223 aa3.03□□□□□ -1.92
CKS1B-207ENST00000477676 IGLC2P0DOY2 106 aa3.03□□□□□ -1.92
CKS1B-207ENST00000477676 SLC25A6P12236 298 aa3.03□□□□□ -1.92
CKS1B-207ENST00000477676 BCAP31P51572 246 aa3.03□□□□□ -1.92
CKS1B-207ENST00000477676 CRYBA4P53673 196 aa3.03□□□□□ -1.92
CKS1B-207ENST00000477676 RRAS2P62070 204 aaPredicted RBP3.03□□□□□ -1.92
CKS1B-207ENST00000477676 AKR1C1Q04828 323 aa3.03□□□□□ -1.92
CKS1B-207ENST00000477676 SLC38A11Q08AI6 406 aa3.03□□□□□ -1.92
CKS1B-207ENST00000477676 ZNF415Q09FC8 603 aa3.03□□□□□ -1.92
CKS1B-207ENST00000477676 ERCC8Q13216 396 aa3.03□□□□□ -1.92
CKS1B-207ENST00000477676 BTN1A1Q13410 526 aa3.03□□□□□ -1.92
CKS1B-207ENST00000477676 LCE3AQ5TA76 89 aa3.03□□□□□ -1.92
CKS1B-207ENST00000477676 Q6ZSA8 131 aa3.03□□□□□ -1.92
CKS1B-207ENST00000477676 NEXN-AS1Q8NBZ9 246 aa3.03□□□□□ -1.92
CKS1B-207ENST00000477676 FAM19A4Q96LR4 140 aa3.03□□□□□ -1.92
CKS1B-207ENST00000477676 LINC00467Q9BRT7 94 aa3.03□□□□□ -1.92
CKS1B-207ENST00000477676 TMEM70Q9BUB7 260 aa3.03□□□□□ -1.92
CKS1B-207ENST00000477676 ARL6Q9H0F7 186 aa3.03□□□□□ -1.92
CKS1B-207ENST00000477676 ARV1Q9H2C2 271 aa3.03□□□□□ -1.92
CKS1B-207ENST00000477676 CACFD1Q9UGQ2 172 aa3.03□□□□□ -1.92
CKS1B-207ENST00000477676 FUT9Q9Y231 359 aa3.03□□□□□ -1.92
CKS1B-207ENST00000477676 TRGV2A0A075B6R0 118 aa3.02□□□□□ -1.93
CKS1B-207ENST00000477676 TRGV1A0A0A0MS02 117 aa3.02□□□□□ -1.93
CKS1B-207ENST00000477676 LOC105371267A0A1B0GV96 52 aa3.02□□□□□ -1.93
CKS1B-207ENST00000477676 DUXBA0A1W2PPF3 345 aa3.02□□□□□ -1.93
CKS1B-207ENST00000477676 SMCO3A2RU48 225 aa3.02□□□□□ -1.93
CKS1B-207ENST00000477676 K7EQD1 137 aa3.02□□□□□ -1.93
CKS1B-207ENST00000477676 ADAP1O75689 374 aa3.02□□□□□ -1.93
CKS1B-207ENST00000477676 IFNA5P01569 189 aa3.02□□□□□ -1.93
CKS1B-207ENST00000477676 SFTA3P0C7M3 94 aa3.02□□□□□ -1.93
CKS1B-207ENST00000477676 METTL15P1P0C7V9 234 aa3.02□□□□□ -1.93
CKS1B-207ENST00000477676 TCL1AP56279 114 aa3.02□□□□□ -1.93
CKS1B-207ENST00000477676 MRPS10P82664 201 aaKnown RBP3.02□□□□□ -1.93
CKS1B-207ENST00000477676 PPP1R1AQ13522 171 aa3.02□□□□□ -1.93
CKS1B-207ENST00000477676 TMEM128Q5BJH2 165 aa3.02□□□□□ -1.93
CKS1B-207ENST00000477676 LCN15Q6UWW0 184 aa3.02□□□□□ -1.93
CKS1B-207ENST00000477676 TMEM14EPQ6UXP3 125 aa3.02□□□□□ -1.93
CKS1B-207ENST00000477676 LINC00305Q7Z4B0 112 aa3.02□□□□□ -1.93
CKS1B-207ENST00000477676 ZFAND2AQ8N6M9 145 aa3.02□□□□□ -1.93
CKS1B-207ENST00000477676 OR11H4Q8NGC9 324 aa3.02□□□□□ -1.93
CKS1B-207ENST00000477676 AP3S1Q92572 193 aa3.02□□□□□ -1.93
CKS1B-207ENST00000477676 DIRAS2Q96HU8 199 aa3.02□□□□□ -1.93
CKS1B-207ENST00000477676 ST6GAL2Q96JF0 529 aa3.02□□□□□ -1.93
CKS1B-207ENST00000477676 ODF3Q96PU9 254 aa3.02□□□□□ -1.93
CKS1B-207ENST00000477676 MGST2Q99735 147 aa3.02□□□□□ -1.93
CKS1B-207ENST00000477676 PYGO2Q9BRQ0 406 aa3.02□□□□□ -1.93
CKS1B-207ENST00000477676 AGPAT4-IT1Q9H0P7 198 aa3.02□□□□□ -1.93
CKS1B-207ENST00000477676 MCUBQ9NWR8 336 aa3.02□□□□□ -1.93
CKS1B-207ENST00000477676 MRPL16Q9NX20 251 aaKnown RBP3.02□□□□□ -1.93
CKS1B-207ENST00000477676 PTTG2Q9NZH5 202 aa3.02□□□□□ -1.93
CKS1B-207ENST00000477676 ICOSQ9Y6W8 199 aa3.02□□□□□ -1.93
CKS1B-207ENST00000477676 IGLV5-45A0A087WSX0 123 aa3.01□□□□□ -1.93
CKS1B-207ENST00000477676 LOC100131303A0A0U1RQF7 123 aa3.01□□□□□ -1.93
CKS1B-207ENST00000477676 C7orf71A4D174 169 aa3.01□□□□□ -1.93
CKS1B-207ENST00000477676 RAB19A4D1S5 217 aa3.01□□□□□ -1.93
CKS1B-207ENST00000477676 E5RGE8 158 aa3.01□□□□□ -1.93
CKS1B-207ENST00000477676 AGPAT2O15120 278 aa3.01□□□□□ -1.93
CKS1B-207ENST00000477676 RGS5O15539 181 aa3.01□□□□□ -1.93
CKS1B-207ENST00000477676 MED6O75586 246 aa3.01□□□□□ -1.93
CKS1B-207ENST00000477676 SFT2D2O95562 160 aa3.01□□□□□ -1.93
CKS1B-207ENST00000477676 SLC25A5P05141 298 aaKnown RBP3.01□□□□□ -1.93
CKS1B-207ENST00000477676 CRYGDP07320 174 aa3.01□□□□□ -1.93
CKS1B-207ENST00000477676 CXCL2P19875 107 aa3.01□□□□□ -1.93
CKS1B-207ENST00000477676 RNASE4P34096 147 aaKnown RBP3.01□□□□□ -1.93
CKS1B-207ENST00000477676 HNRNPA3P51991 378 aaKnown RBP3.01□□□□□ -1.93
CKS1B-207ENST00000477676 SELENOTP62341 195 aa3.01□□□□□ -1.93
CKS1B-207ENST00000477676 SRPXP78539 464 aa3.01□□□□□ -1.93
CKS1B-207ENST00000477676 LINC01620Q4KN68 170 aa3.01□□□□□ -1.93
CKS1B-207ENST00000477676 C14orf177Q52M58 125 aa3.01□□□□□ -1.93
CKS1B-207ENST00000477676 NFE4Q86UQ8 179 aa3.01□□□□□ -1.93
CKS1B-207ENST00000477676 EIF4E3Q8N5X7 224 aaKnown RBP3.01□□□□□ -1.93
CKS1B-207ENST00000477676 Q8N814 137 aa3.01□□□□□ -1.93
CKS1B-207ENST00000477676 DYNC2LI1Q8TCX1 351 aa3.01□□□□□ -1.93
CKS1B-207ENST00000477676 C15orf40Q8WUR7 153 aa3.01□□□□□ -1.93
CKS1B-207ENST00000477676 SMIM8Q96KF7 97 aa3.01□□□□□ -1.93
CKS1B-207ENST00000477676 CIB3Q96Q77 187 aaPredicted RBP3.01□□□□□ -1.93
CKS1B-207ENST00000477676 VGLL1Q99990 258 aa3.01□□□□□ -1.93
CKS1B-207ENST00000477676 SLC50A1Q9BRV3 221 aa3.01□□□□□ -1.93
CKS1B-207ENST00000477676 MRPL32Q9BYC8 188 aaKnown RBP3.01□□□□□ -1.93
CKS1B-207ENST00000477676 GEMIN7Q9H840 131 aaKnown RBP3.01□□□□□ -1.93
CKS1B-207ENST00000477676 PSENENQ9NZ42 101 aa3.01□□□□□ -1.93
CKS1B-207ENST00000477676 PRO0255Q9UI72 69 aa3.01□□□□□ -1.93
CKS1B-207ENST00000477676 NAGKQ9UJ70 344 aa3.01□□□□□ -1.93
CKS1B-207ENST00000477676 SCP2D1Q9UJQ7 156 aa3.01□□□□□ -1.93
CKS1B-207ENST00000477676 HHLA3Q9XRX5 114 aa3.01□□□□□ -1.93
CKS1B-207ENST00000477676 RCL1Q9Y2P8 373 aaKnown RBP3.01□□□□□ -1.93
CKS1B-207ENST00000477676 LY96Q9Y6Y9 160 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms